CX671617

Overview
NameCX671617
Unique NameCX671617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length787
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31
Identity = 76/238 (31.93%), Postives = 113/238 (47.48%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIA-LNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +P  + EI+V PPK+ EVR+K+L + +C +D     G     +P                        D VIP ++ +C +C +C     N+C K  +    GL+ DGTSR + +G+ +YH     T++EY V   + VV++D S  L     + CGF+TGYGAA   AKV+                     +  GA++IIGID N  K  K +  G T+ +N
Sbjct:    5 KVIKCKAAVVWEPKKPFSIVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVNFPIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVN 242          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 5.233e-31
Identity = 76/238 (31.93%), Postives = 110/238 (46.22%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P                        D VIP +  +C  C  C +  SN CLK  +    G + DGT R + RG+ ++H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 6.834e-31
Identity = 82/239 (34.31%), Postives = 110/239 (46.03%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCL--KYPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +P  +E+I+V PPK+ EVR+KM+   VC +D     G      P                        D VIP +  +C  C  C    SNLC   K      G +LDGTSR S RG+ ++H  S ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A + AKV                      +  GAAKII +D N  K  K +  G TD IN
Sbjct:    6 KVIKCKAAVLWEPHKPFTIEDIEVAPPKAHEVRIKMVATGVCRSDDHAVSGSLFTPLPAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFISTSTFSQYTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDINKDKFAKAKELGATDCIN 244          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.926e-31
Identity = 76/238 (31.93%), Postives = 110/238 (46.22%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P                        D VIP +  +C  C  C +  SN CLK  +    G + DGT R + RG+ ++H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.926e-31
Identity = 76/238 (31.93%), Postives = 112/238 (47.06%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P                        D VIP  + +C  C  C +   N CLK  ++   G + DGTSR + RG+ ++H    ST+S+Y V+D N V ++D +  +     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWEVMKPFSIEDVEVAPPKAYEVRIKMVTVGICGTDDHVVSGTMVTPLPVILGHEAAGIVESVGEGVTTVEPGDKVIPLALPQCGKCRICKTPERNYCLKNDVSNPRGTLQDGTSRFTCRGKPIHHFLGVSTFSQYTVVDENAVAKIDAASPMEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1G_PAPHA (Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH1C PE=2 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 1.523e-30
Identity = 76/238 (31.93%), Postives = 109/238 (45.80%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W + +P  +EE++V PPK+ EVR+KM+   +C +D     G      P                        D VIP +  +C  C  C +  SN C K  ++   G M DGT R +  G+ ++H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG A K AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWEVKKPFSIEEVEVAPPKAHEVRIKMVAVGICRSDDHVVSGTLVTPLPAILGHEAAGIVEGVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCFKNDLSNPRGTMQDGTRRFTCGGKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGPAVKVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1B_PAPHA (Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH1B PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.523e-30
Identity = 75/238 (31.51%), Postives = 110/238 (46.22%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W + +P  +E+++V PPK+ EVR+KM+   +C TD     G      P                        D VIP +  +C  C  C S   N C+K  ++   G + DGT R + RG+ ++H    ST+S+Y V+D N V ++D +  L     + CGF+TGYG+A   AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVSPLPAILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKSPEGNYCVKNDLSNPRGTLQDGTRRFTCRGKPIHHFVGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSVCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.989e-30
Identity = 80/239 (33.47%), Postives = 115/239 (48.12%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDI-LCSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIAL-NGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +P  +E+I+V PPK+ EVR+KM+   VC +D  + S    +PL P                        D VIP +  +C  C  C     NLC+K  +    G +LDGTSR + RG+ +++  S ST+S+Y V+D   V ++D +  L     + CGF+TGYG+A K AKV                      +  GAA+II +D N  K  K +  G T+ IN
Sbjct:    6 KVIKCKAAVLWEPHKPFSIEDIEVAPPKAHEVRIKMVATGVCRSDDHVVSRSLASPL-PAVLGHEGAGIVESVGEGVTSVKPGDKVIPLFTPQCGKCRICKHPEYNLCMKNDLMQPRGTLLDGTSRFTCRGKAIHNFISTSTFSQYTVVDEMAVAKIDGASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECIN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.597e-30
Identity = 76/239 (31.80%), Postives = 114/239 (47.70%), Query Frame = 1
Query:   76 QAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDIL-CSEGFPAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLK-YPIALNGLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            + I CKA V W   +PL +EEI+V+ P + E+R+K++   VCHTD+    EG     +P                        + VIP ++ +C +C  C S  +N C+K +      +M    +R + +G+K+      ST+S+Y V++   V ++DPS  L     L CG +TG+GAA   AKVE                        GA +II +D NP K EK + FG TDF+N
Sbjct:    5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVN 243          
BLAST of CX671617 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.786e-30
Identity = 79/240 (32.92%), Postives = 109/240 (45.42%), Query Frame = 1
Query:   73 SQAITCKAVVCWGLGEPLKVEEIQVEPPKSTEVRVKMLYASVCHTDILCSEGF-PAPLYPRXXXXXXXXXXXXXXXXXXXXXXXDIVIPTYVGECKDCENCTSRISNLCLKYPIALN-GLMLDGTSRMSVRGQKLYHIFSCSTWSEYMVIDANYVVRVDPSIDLSHASFLSCGFTTGYGAAWKEAKVEKXXXXXXXXXXXXXXXXXXXXRMQGAAKIIGIDKNPWKKEKGEAFGMTDFIN 786
            +  I  +A V +   +PL++ EI VE P+  EV ++  +  VCHTD     G  P  ++P                        D VIP Y  EC +CE C S  +NLC+        GLM D T+R S +GQ +YH   CST+SEY V+    + +++P  +      L CG TTG GA    AKV++                    R   A +II ID NP K E  + FG TD +N
Sbjct:    7 NSTIKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVLSVKPGDHVIPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLMPDCTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPAKFELAKQFGATDCLN 246          
The following BLAST results are available for this feature:
BLAST of CX671617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
ADH1B_UROHA5.233e-3131.93Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH1B_PANTR5.233e-3131.93Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1_RAT6.834e-3134.31Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH1B_HUMAN8.926e-3131.93Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]
ADH1A_MACMU8.926e-3131.93Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH1G_PAPHA1.523e-3031.93Alcohol dehydrogenase 1C OS=Papio hamadryas GN=ADH... [more]
ADH1B_PAPHA1.523e-3031.51Alcohol dehydrogenase 1B OS=Papio hamadryas GN=ADH... [more]
ADH1_PERMA1.989e-3033.47Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_GADCA2.597e-3031.80Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
FRMA_HAEIN5.786e-3032.92S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B08-D16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671617 ID=CX671617; Name=CX671617; organism=Citrus sinensis; type=EST; length=787bp
ACTAGTTCCAGAGCTCATCTCCGCTCGAAATTCGAAGCTGCAAAATCTAC
AGCAATACTAACAATGAGCAATTCACAAGCCATAACGTGCAAAGCTGTGG
TATGCTGGGGTTTAGGAGAGCCATTAAAGGTAGAGGAGATACAAGTAGAG
CCTCCGAAATCAACTGAAGTTAGGGTTAAGATGCTTTATGCCAGTGTTTG
TCACACTGATATCCTTTGCTCTGAAGGATTCCCAGCGCCTCTCTATCCTC
GTGTTCTCGGGCACGAAGGTGTCGGGGTGGTGGAGAGTGTTGGGGATGAA
GTGAAAGAAGTAAAAGAAGGAGATATTGTGATTCCAACTTATGTTGGAGA
ATGCAAAGATTGTGAAAATTGCACATCACGAATCAGCAATTTATGCCTAA
AATATCCAATAGCACTGAACGGTTTAATGCTTGATGGCACTTCAAGAATG
TCCGTGAGAGGCCAAAAATTGTATCACATTTTTTCATGCTCCACTTGGTC
TGAATATATGGTCATCGATGCCAATTATGTAGTCAGAGTTGATCCAAGCA
TAGACCTTTCGCATGCTAGCTTCCTTTCATGTGGATTTACAACTGGTTAT
GGGGCGGCTTGGAAGGAAGCCAAAGTTGAAAAAGGATCTAGTGTTGCTGT
TTTAGGCCTTGGTACTGTTGGATTAGGGGCTGTTGATGGAGCCAGGATGC
AAGGGGCAGCTAAGATAATTGGGATAGACAAGAACCCATGGAAAAAAGAA
AAGGGGGAAGCTTTTGGAATGACAGATTTCATAAACC
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