CX671613

Overview
NameCX671613
Unique NameCX671613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.878e-12
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 3
Query:  501 IGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNRE---------FLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            IG+G  G VY+  +++ G+V+AVK+L    + G  +         F  E               +G C + + RLL+Y++MP GSL   LH+      +LDW+ R +I  GAA+GL YLH    PP+++RD K
Sbjct:  792 IGKGCSGVVYRADVDN-GEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGS--SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIK 921          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: PUB53_ARATH (Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana GN=PUB53 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 50/144 (34.72%), Postives = 69/144 (47.92%), Query Frame = 3
Query:  441 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            Q FT+ E+  AT +F  +  IG G +G VYK  L  T  + AVK L       +++F  E               +G C D     LVYE+M  GSLED L  +  D + + W  R++IA   A  L +LH     P+I+RD K
Sbjct:  446 QEFTWEEIINATSSFSEDLKIGMGAYGDVYKCNLHHT--IAAVKVLHSAESSLSKQFDQELEILSKIRHPHLVLLLGACPD--HGALVYEYMENGSLEDRLFQVN-DSQPIPWFVRLRIAWEVASALVFLHKSKPTPIIHRDLK 584          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.413e-12
Identity = 43/140 (30.71%), Postives = 69/140 (49.29%), Query Frame = 3
Query:  408 PKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEY 827
            P++G G +     F+F  L  AT +F PE+ + +     V+KG L++ G  VA+K+ +       + FL E               IGYC DGD+R LV +FM   +L   L       + +DW+ R+++A   A+ L+Y
Sbjct:   25 PRNGGGEDPPLTKFSFSALKTATNHFSPENIVSDQTSDVVFKGRLQNGG-FVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRL--FQRKYQTMDWSIRLRVAYFVAEALDY 161          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: PUB52_ARATH (U-box domain-containing protein 52 OS=Arabidopsis thaliana GN=PUB52 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.375e-12
Identity = 52/147 (35.37%), Postives = 71/147 (48.30%), Query Frame = 3
Query:  441 QTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHL---HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            Q +T+ E+AAAT +F     IG G +G VYK  L  T    AVK L     Q +++F  E               +G C   ++  LVYE+M  GSL+D L   +D PP    + W  R +IA   A  L +LH     P+I+RD K
Sbjct:  476 QHYTWEEIAAATSDFAENLKIGIGAYGSVYKCNLHHT--TGAVKVLHAGETQLSKQFDQELEILSKIRHPHLVLLLGACP--ERGCLVYEYMDNGSLDDRLMLVNDTPP----IPWFERFRIALEVASALVFLHKSKPRPIIHRDLK 614          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.094e-11
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  435 AAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLH-DLPPDKEALDWNTRMKIAAGAAKGLEYLHDK 839
            A + F   +L  A+        +G+G FG  YK  L++   VVAVK+L ++ +  ++EF  +                 Y    D++LLVY+FMP+GSL   LH +    +  L+W+ R +IA GAA+GL+YLH +
Sbjct:  360 ATKVFDLEDLLRASAEV-----LGKGTFGTAYKAVLDAV-TVVAVKRL-KDVMMADKEFKEKIELVGAMDHENLVPLRAYYFSRDEKLLVYDFMPMGSLSALLHGNRGAGRSPLNWDVRSRIAIGAARGLDYLHSQ 488          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.429e-11
Identity = 47/136 (34.56%), Postives = 70/136 (51.47%), Query Frame = 3
Query:  435 AAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLH-DLPPDKEALDWNTRMKIAAGAAKGLEYLHDK 839
            A + F   +L  A+        +G+G FG  YK  L++   +VAVK+L ++    +REF  +                 Y   GD++LLVY+FMP+GSL   LH +    +  L+W  R  IA GAA+GL+YLH +
Sbjct:  354 ATKVFDLEDLLRASAEV-----LGKGTFGTAYKAVLDAV-TLVAVKRL-KDVTMADREFKEKIEVVGAMDHENLVPLRAYYYSGDEKLLVYDFMPMGSLSALLHGNKGAGRPPLNWEVRSGIALGAARGLDYLHSQ 482          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: PUB51_ARATH (U-box domain-containing protein 51 OS=Arabidopsis thaliana GN=PUB51 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.429e-11
Identity = 62/216 (28.70%), Postives = 92/216 (42.59%), Query Frame = 3
Query:  252 DSREDEKLNPEKE-PDDQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQT---FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEA-----LDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            +   DE +  E+E  +D +     V   I R    R    +R+  V K +  L     G  +  Q    F + E+  AT +F  E  IG GG+G VY+  L  T   V V   D++ L   ++F  E               +G C   ++  LVYE+M  GSLE+ L    P+ +      L W  R +IA   A  L +LH     P+++RD K
Sbjct:  348 EEEADEVVEMERERQEDAENEAELVRECIERETEERLEAEARAEEVRKEKQRLEDALEGGPLQRQQYMKFEWEEIVEATSSFSDELKIGVGGYGSVYRCNLHHTTVAVKVLHSDKSSL--TKQFHQELEILSKIRHPHLLLLLGACP--ERGSLVYEYMHNGSLEERLMKRRPNVDTPQPPPLRWFERFRIAWEIASALYFLHTNEPRPIVHRDLK 559          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.866e-11
Identity = 46/138 (33.33%), Postives = 71/138 (51.45%), Query Frame = 3
Query:  486 RPESFIGEGGFGRVYKGWLESTGQVVAVKQL----DRNGLQGNRE--FLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE---ALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            + ++ +G G  G VYK  + + G+++AVK+L      NG    R+   L E               +G C + D  +L+YE+MP GSL+D LH    DK    A +W    +IA G A+G+ YLH   +P +++RD K
Sbjct:  720 KTDNILGMGSTGTVYKAEMPN-GEIIAVKKLWGKNKENGKIRRRKSGVLAEVDVLGNVRHRNIVRLLGCCTNRDCTMLLYEYMPNGSLDDLLHG--GDKTMTAAAEWTALYQIAIGVAQGICYLHHDCDPVIVHRDLK 854          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 47/163 (28.83%), Postives = 78/163 (47.85%), Query Frame = 3
Query:  408 PKDGAGVNIAAQT--FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQL------DRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEA--LDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 866
            P+ G  ++I +    F ++++  +T  F P   IG GG+ +VY+  L+ T  ++AVK+L      + +     +EFL E                G+C+      L+YE+M  GSL   L +   D+EA  L W  R+ +  G A  L Y+H     P+++RD
Sbjct:  824 PETGENMSIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQDT--IIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLAN---DEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRD 981          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.090e-11
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNRE-FLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHL---HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            + + EL   TK+F     +G+GGFG VY+G L S G+ VAVK L    L+GN + F+ E               +G+C +G +R ++ EF+  GSL+  +     L P+       T   IA G A+GLEYLH      +++ D K
Sbjct:  486 YIYAELKKITKSF--SHTVGKGGFGTVYRGNL-SNGRTVAVKVL--KDLKGNGDDFINEVTSMSQTSHVNIVSLLGFCYEGSKRAIISEFLEHGSLDQFISRNKSLTPNV-----TTLYGIALGIARGLEYLHYGCKTRIVHFDIK 621          
The following BLAST results are available for this feature:
BLAST of CX671613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
RCH2_ARATH2.878e-1234.59Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
PUB53_ARATH3.759e-1234.72Putative U-box domain-containing protein 53 OS=Ara... [more]
SSP_ARATH6.413e-1230.71Probable inactive receptor-like kinase SSP OS=Arab... [more]
PUB52_ARATH8.375e-1235.37U-box domain-containing protein 52 OS=Arabidopsis ... [more]
Y1848_ARATH1.094e-1133.82Probable inactive receptor kinase At1g48480 OS=Ara... [more]
RLK90_ARATH1.429e-1134.56Probable inactive receptor kinase RLK902 OS=Arabid... [more]
PUB51_ARATH1.429e-1128.70U-box domain-containing protein 51 OS=Arabidopsis ... [more]
Y5148_ARATH1.866e-1133.33Probable leucine-rich repeat receptor-like protein... [more]
Y1571_ARATH2.437e-1128.83Probable leucine-rich repeat receptor-like protein... [more]
Y5392_ARATH7.090e-1134.25Probable receptor-like protein kinase At5g39020 OS... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B06-D12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671613 ID=CX671613; Name=CX671613; organism=Citrus sinensis; type=EST; length=872bp
TTATCAGCTTAAAGTTATTTTTATTTCCTTCTGTTCTTGTTGGATTCATT
TGCTTTGTGCTAAGTGGATATATCGTGAAGGTGGTTTGTACCCAGATGGG
ATTGTTGTTTGGAATATTAACTGTTGTCTGAGTGTGAGAAAAAAAATCTG
CTTTTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCC
CTTTTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTT
TGATTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATC
AAAAGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCT
GGAAGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATT
GCACCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTA
CATTTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTC
ATAGGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCAC
TGGTCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTA
ATAGGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCT
AACCTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCT
TGTCTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATT
TACCACCTGATAAGGAAGCACTTGATTGGAACACAAGAATGAAGATTGCA
GCTGGTGCTGCCAAAGGTTTGGAATACCTCCATGATAAAGCAAACCCTCC
AGTTATCTATAGGGACTTTAAG
back to top