CX671613

Overview
NameCX671613
Unique NameCX671613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.281e-24
Identity = 71/178 (39.89%), Postives = 94/178 (52.81%), Query Frame = 3
Query:  348 SGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQ--LDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD-KEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            S +D   ++ NG  + +L    D       A+ FT+ EL  A   F+ ES +G+G F  VYKG L   G  VAVK+  +  +  + + EF  E               +GYC +  +RLLVYEFM  GSL +HLH      KE LDW  R+ IA  AA+G+EYLH  A PPVI+RD K
Sbjct:  471 SSKDSAFTKDNGKIRPDL----DELQKRRRARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRD-GTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIK 643          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 62/142 (43.66%), Postives = 79/142 (55.63%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            +T REL AAT     E+ IGEGG+G VY+G L + G  VAVK L  N  Q  +EF VE               +GYC +G  R+LVY+F+  G+LE  +H    D   L W+ RM I  G AKGL YLH+   P V++RD K
Sbjct:  142 YTLRELEAATNGLCEENVIGEGGYGIVYRGIL-TDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIK 282          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 64/154 (41.56%), Postives = 84/154 (54.55%), Query Frame = 3
Query:  411 KDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            KD     + + TFT R++  AT +F P + IGEGGFG V+KG L + G+VVAVKQL     QGNREFL E                G+C +  Q LL YE+M   SL   L      +  +DW TR KI  G AKGL +LH+++    ++RD K
Sbjct:  657 KDPYEEELPSGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVL-ADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIK 809          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 3
Query:  438 AQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNG--LQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD-KEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            AQ F++ EL  AT  F  +S +G+G F  V+KG L   G VVAVK+  +     + ++EF  E               +GYC DG +RLLVYEFM  GSL  HLH   P+ K+ L+W  R+ IA  AA+G+EYLH  A PPVI+RD K
Sbjct:  490 AQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRD-GTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIK 636          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 63/148 (42.57%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  429 NIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            +++ + FT   +  AT+ ++  + IGEGGFG VY+G L+  GQ VAVK       QG REF  E               +GYC + DQ++LVY FM  GSL D L+  P  ++ LDW TR+ IA GAA+GL YLH      VI+RD K
Sbjct:  579 SVSVKPFTLEYIELATEKYK--TLIGEGGFGSVYRGTLDD-GQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVK 723          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.303e-24
Identity = 66/169 (39.05%), Postives = 89/169 (52.66%), Query Frame = 3
Query:  366 RSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            R R+N +S     L +DG       Q F F  + AAT  F   + +G GGFG VYKG L  TG+ VA+K+L +   QG  EF  E               +GYC DG++++LVYEF+P  SL+  L D    +  LDW  R KI  G A+G+ YLH  +   +I+RD K
Sbjct:  309 RRRNNKLSAETEDLDEDGITSTETLQ-FQFSAIEAATNKFSESNKLGHGGFGEVYKGQL-ITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFD-NEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLK 474          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.246e-23
Identity = 74/196 (37.76%), Postives = 103/196 (52.55%), Query Frame = 3
Query:  300 QKQG-QPTVSNNISRLP----SGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            +KQG Q   S+  S LP    S     +S  +G S    HL    AG+    + F+  E+   T+NF   + IG GGFG+VYKG ++ T +V AVK+ + N  QG  EF  E               IGYC +G +  LVY++M  G+L +HL++    K  L W  R++IA GAA+GL YLH  A   +I+RD K
Sbjct:  454 KKQGYQGGDSHTSSWLPIYGNSTTSGTKSTISGKSNNGSHLSNLAAGL---CRRFSLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKV-AVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYMAFGTLREHLYN--TKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVK 643          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.627e-23
Identity = 61/149 (40.94%), Postives = 87/149 (58.39%), Query Frame = 3
Query:  426 VNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            +++   TFT+ EL +AT++F P + +GEGGFG VYKG L + G+ VAVK L     QG  +F+ E                G C +G+ RLLVYE++P GSL+  L         LDW+TR +I  G A+GL YLH++A   +++RD K
Sbjct:  674 MDVKPYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKL-NDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQAL--FGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVK 819          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.627e-23
Identity = 66/164 (40.24%), Postives = 88/164 (53.66%), Query Frame = 3
Query:  387 SKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDR--NGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            SKR  H P  G   + +A  FT   L   T NF  E+ IGEG  G VY+  L   G+ +AVK+L    N  Q + EFL                 +GYC +  QRLLVYE+ P GSL+D LH      + L WN R+ IA GA+K L++LH+   PPV++++FK
Sbjct:  466 SKRAAHFPP-GLNSSSSATVFTIASLQQYTNNFSEENIIGEGSIGNVYRAELRH-GKFLAVKKLSNTINRTQSDGEFLNLVSNVLKLKRGHILELLGYCNEFGQRLLVYEYCPNGSLQDALHLDRKLHKKLTWNVRINIALGASKALQFLHEVCQPPVVHQNFK 627          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.125e-23
Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F+  E+ +AT +F  +  IG GGFG VYKG ++    +VAVK+L+    QG +EF  E               IGYC D ++ +LVYE+MP G+L+DHL   D   D   L W  R++I  GAA+GL+YLH  A   +I+RD K
Sbjct:  513 FSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASD-PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIK 655          
The following BLAST results are available for this feature:
BLAST of CX671613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
ACR4_ARATH4.281e-2439.89Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y1154_ARATH5.592e-2443.66Probable serine/threonine-protein kinase At1g01540... [more]
RKF1_ARATH5.592e-2441.56Probable LRR receptor-like serine/threonine-protei... [more]
CRI4_MAIZE5.592e-2444.59Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
NORK_PEA7.303e-2442.57Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK25_ARATH7.303e-2439.05Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
ANX1_ARATH1.246e-2337.76Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y5614_ARATH1.627e-2340.94Probable LRR receptor-like serine/threonine-protei... [more]
SUB_ARATH1.627e-2340.24Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
Y5389_ARATH2.125e-2341.67Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B06-D12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671613 ID=CX671613; Name=CX671613; organism=Citrus sinensis; type=EST; length=872bp
TTATCAGCTTAAAGTTATTTTTATTTCCTTCTGTTCTTGTTGGATTCATT
TGCTTTGTGCTAAGTGGATATATCGTGAAGGTGGTTTGTACCCAGATGGG
ATTGTTGTTTGGAATATTAACTGTTGTCTGAGTGTGAGAAAAAAAATCTG
CTTTTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCC
CTTTTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTT
TGATTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATC
AAAAGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCT
GGAAGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATT
GCACCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTA
CATTTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTC
ATAGGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCAC
TGGTCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTA
ATAGGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCT
AACCTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCT
TGTCTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATT
TACCACCTGATAAGGAAGCACTTGATTGGAACACAAGAATGAAGATTGCA
GCTGGTGCTGCCAAAGGTTTGGAATACCTCCATGATAAAGCAAACCCTCC
AGTTATCTATAGGGACTTTAAG
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