CX671613

Overview
NameCX671613
Unique NameCX671613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.182e-23
Identity = 63/157 (40.13%), Postives = 86/157 (54.78%), Query Frame = 3
Query:  405 LPKDGAGVNIAAQT-FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            L ++G  +  A    F F+ + AAT NF P + +G+GGFG VYKG   S G  VAVK+L +   QG REF  E               +GYC +G++++LVYEF+   SL+  L D    K  LDW  R KI  G A+G+ YLH  +   +I+RD K
Sbjct:  481 LAENGDSITTAGSLQFDFKAIVAATNNFLPINKLGQGGFGEVYKGTFPS-GVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFDTTM-KRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLK 635          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.074e-23
Identity = 63/144 (43.75%), Postives = 79/144 (54.86%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLH--DLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F F+E+  AT  F   S +G GGFGRVYKG LE  G  VAVK+ +    QG  EF  E               IGYC +  + +LVYE+M  G L  HL+  DLPP    L W  R++I  GAA+GL YLH  A+  +I+RD K
Sbjct:  498 FMFQEIMDATNKFDESSLLGVGGFGRVYKGTLED-GTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLPP----LSWKQRLEICIGAARGLHYLHTGASQSIIHRDVK 636          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.055e-22
Identity = 57/142 (40.14%), Postives = 75/142 (52.82%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F +REL  AT NF  ++ +G+GGFG+VYKG L    +V   +  D     G+  F  E               IG+C    +RLLVY FM   SL   L ++      LDW TR +IA GAA+G EYLH+  NP +I+RD K
Sbjct:  278 FAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVK 419          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SRF3_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana GN=SRF3 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.055e-22
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGL--QGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            ++   L   T++F  E+ IG G  G VY+  L + G++ AVK+LD+     Q + EF+                 +GYCA+ DQRLLVYE+   G+L+D LH     K+ L WNTR+ +A GAA+ LEYLH+   PP+I+R+FK
Sbjct:  473 YSIASLQQYTESFAQENLIGSGMLGSVYRARLPN-GKLFAVKKLDKRASEQQQDHEFIELVNNIDMIRHSNIVELVGYCAEHDQRLLVYEYCSNGTLQDGLHSDDEFKKKLSWNTRVSMALGAARALEYLHEVCEPPIIHRNFK 615          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.799e-22
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNR-EFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F+ REL  A+  F  ++ +G GGFG+VYKG L + G +VAVK+L      G   +F  E                G+C    +RLLVY +M  GS+   L + PP +  LDW TR +IA G+A+GL YLHD  +P +I+RD K
Sbjct:  290 FSLRELQVASDGFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVK 431          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.349e-22
Identity = 63/165 (38.18%), Postives = 89/165 (53.94%), Query Frame = 3
Query:  387 SKRELHLPKDGAGVNIAAQT---FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            +++  + P   AG +I         +R +  AT +F   + IG+GGFG VYKG L S G  VAVK+L ++  QG  EF  E               +G+C DG++R+LVYE++P  SL+  L D P  K  LDW  R KI  G A+G+ YLH  +   +I+RD K
Sbjct:  302 ARKSYYTPSAFAGDDITTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTL-SDGTEVAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFD-PAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLK 464          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.068e-22
Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNR-EFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F+ REL  A+ NF  ++ +G GGFG+VYKG L + G +VAVK+L     QG   +F  E                G+C    +RLLVY +M  GS+   L + P  +  LDW  R +IA G+A+GL YLHD  +P +I+RD K
Sbjct:  277 FSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 418          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: RLK6_ARATH (Receptor-like protein kinase At3g21340 OS=Arabidopsis thaliana GN=At3g21340 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.007e-22
Identity = 56/142 (39.44%), Postives = 79/142 (55.63%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            FT+ E+   T NF  E  +G+GGFG VY G + +T QV AVK L  +  QG +EF  E               +GYC +G+   L+YE+M  G L +H+         L+W TR+KI   +A+GLEYLH+   PP+++RD K
Sbjct:  582 FTYSEVVTMTNNF--ERVLGKGGFGMVYHGTVNNTEQV-AVKMLSHSSSQGYKEFKAEVELLLRVHHKNLVGLVGYCDEGENLALIYEYMANGDLREHMSG-KRGGSILNWETRLKIVVESAQGLEYLHNGCKPPMVHRDVK 719          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.234e-22
Identity = 62/137 (45.26%), Postives = 78/137 (56.93%), Query Frame = 3
Query:  462 LAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            L  AT NF  +  +G G FG VY G ++  G+ VAVK         NR+F+ E               IGYC + D+R+LVYE+M  GSL DHLH    D + LDW TR++IA  AAKGLEYLH   NP +I+RD K
Sbjct:  601 LEEATDNFSKK--VGRGSFGSVYYGRMKD-GKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHG-SSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVK 733          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.234e-22
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 3
Query:  378 NGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDK--EALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            N V +RE  L  +  G +  ++ FT RE+  AT NF  ++ IG GGFG V+K  LE  G + A+K+   N  +G  + L E               +G C D +  LL+YEF+P G+L +HLH    D+  + L W  R++IA   A+GL YLH  A PP+ +RD K
Sbjct:  330 NIVKEREEMLSANSTGKS--SRIFTGREITKATNNFSKDNLIGTGGFGEVFKAVLED-GTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHG-SSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVK 492          
The following BLAST results are available for this feature:
BLAST of CX671613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
CRK23_ARATH6.182e-2340.13Putative cysteine-rich receptor-like protein kinas... [more]
THE1_ARATH8.074e-2343.75Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y5129_ARATH1.055e-2240.14Probable LRR receptor-like serine/threonine-protei... [more]
SRF3_ARATH1.055e-2240.28Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsi... [more]
SERK1_ARATH1.799e-2240.56Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
CRK10_ARATH2.349e-2238.18Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
BAK1_ARATH3.068e-2240.56BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
RLK6_ARATH4.007e-2239.44Receptor-like protein kinase At3g21340 OS=Arabidop... [more]
Y1677_ARATH5.234e-2245.26Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH5.234e-2237.72Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B06-D12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671613 ID=CX671613; Name=CX671613; organism=Citrus sinensis; type=EST; length=872bp
TTATCAGCTTAAAGTTATTTTTATTTCCTTCTGTTCTTGTTGGATTCATT
TGCTTTGTGCTAAGTGGATATATCGTGAAGGTGGTTTGTACCCAGATGGG
ATTGTTGTTTGGAATATTAACTGTTGTCTGAGTGTGAGAAAAAAAATCTG
CTTTTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCC
CTTTTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTT
TGATTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATC
AAAAGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCT
GGAAGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATT
GCACCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTA
CATTTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTC
ATAGGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCAC
TGGTCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTA
ATAGGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCT
AACCTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCT
TGTCTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATT
TACCACCTGATAAGGAAGCACTTGATTGGAACACAAGAATGAAGATTGCA
GCTGGTGCTGCCAAAGGTTTGGAATACCTCCATGATAAAGCAAACCCTCC
AGTTATCTATAGGGACTTTAAG
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