CX671613

Overview
NameCX671613
Unique NameCX671613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SRF7_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsis thaliana GN=SRF7 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.234e-22
Identity = 62/194 (31.96%), Postives = 100/194 (51.55%), Query Frame = 3
Query:  297 DQKQGQPTVSNNISRLPSGRDRLRSRSNGVSKRELHLPKDGAGVNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNR--EFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            + K+   ++S N+   PS R +     +   ++ +   K    V     T+T  +L  AT +F  ++ +GEG FGRVY+   E  G+V+AVK++D + L  +   +F                   GYC++  Q L+VYEF   GSL D LH    + + L WN R+KIA G A+ LEYLH+  +P +++++ K
Sbjct:  357 ETKKLDTSLSMNLRPPPSERHKSFDDDDSTMRKPIVAKKAAVVVPSNVNTYTVSDLQVATNSFSVDNLLGEGTFGRVYRAQFED-GKVLAVKKIDSSALPTDTADDFTEIVSKIAHLDHENVTKLDGYCSEHGQHLVVYEFHRNGSLHDFLHLAEEESKPLIWNPRVKIALGTARALEYLHEVCSPSIVHKNIK 549          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: ACCR3_ARATH (Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana GN=CCR3 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.234e-22
Identity = 72/202 (35.64%), Postives = 104/202 (51.49%), Query Frame = 3
Query:  312 QPTVSNNISRLPSGRDRLRSRS-NGVSKRELHLPKDGAGVNIA-----AQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGL-----QGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALD----WNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            QPT++   S   S     RS S      R L + +  +G +       A+ F+F ELA+AT NF  E+ IG G FG VY+G L   G+ VA+K+ + N       +    F  E               +GYC + +++LLVY++M  G+L DHLHD    ++       W  R+KIA  AA+G+EYLH+ A PP+I+RD K
Sbjct:  433 QPTITRGGSNSRSNSSNSRSLSIRRQGSRMLSMRRQRSGTSSMKHADKAEEFSFSELASATGNFSLENKIGSGSFGVVYRGKLND-GREVAIKRGEVNAKMKKFQEKETAFDSEIAFLSRLHHKHLVRLVGYCEEREEKLLVYDYMKNGALYDHLHDKNNVEKHSSLINSWKMRIKIALDAARGIEYLHNYAVPPIIHRDIK 633          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  426 VNIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            + +  + FT+ E+   T NF     +GEGGFG V  G +  + QV AVK L ++  QG +EF  E               +GYC +GD   L+YEF+P G L  HL      K  ++W TR++IAA AA GLEYLH    PP+++RD K
Sbjct:  563 IEMKKRKFTYSEVTKMTNNFG--RVVGEGGFGVVCHGTVNGSEQV-AVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSG-KGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVK 707          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.835e-22
Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F+F+ + AAT  F   + IG GGFG VY+G L S+G  VAVK+L +   QG  EF  E               +G+C +G++++LVYEF+P  SL+  L D P  +  LDW  R  I  G A+G+ YLH  +   +I+RD K
Sbjct:  333 FSFKTIEAATDKFSDSNMIGRGGFGEVYRGKL-SSGPEVAVKRLSKTSGQGAEEFKNEAVLVSKLQHKNLVRLLGFCLEGEEKILVYEFVPNKSLDYFLFD-PAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLK 472          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 63/175 (36.00%), Postives = 89/175 (50.86%), Query Frame = 3
Query:  360 RLRSRSNGVSKRELHLPKDGAGVNIAAQT----FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            R  + SN  +     LP D         T    FT+ E+   T NF  +  +G+GGFG VY G +  T QV AVK L  +  QG ++F  E               +GYC +GD+  L+YE+M  G L++H+         L+W TR+KIA  AA+GLEYLH+   P +++RD K
Sbjct:  534 RKNNPSNDEAPTSCMLPADSRSSEPTIVTKNKKFTYAEVLTMTNNF--QKILGKGGFGIVYYGSVNGTEQV-AVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSG-KRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVK 704          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: ACCR2_ARATH (Serine/threonine-protein kinase-like protein CCR2 OS=Arabidopsis thaliana GN=CCR2 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.927e-22
Identity = 61/144 (42.36%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGL--QGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F   EL  AT  F+  + +G G FG VYK  L S G  VAVK+ +   +    NR F  E               +GYC++  +RLLVYE+MP G+L DHLH    D   LDW+ R+KI   AA+GL+YLH++ +PP+I+RD K
Sbjct:  507 FRLSELKDATHGFKEFNELGRGSFGFVYKAVL-SDGIHVAVKRANAATIIHSNNRGFESELEILCKIRHNNIVNLLGYCSEMGERLLVYEYMPHGTLHDHLHG---DLSQLDWSMRLKIMLQAARGLDYLHNEVDPPIIHRDVK 646          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 57/149 (38.26%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  432 IAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNRE--FLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            I A  +T   L  AT +F  E+ IGEG  GRVY+    + G+++A+K++D   L    E  FL                  GYC +  QRLLVYE++  G+L+D LH        L WN R+K+A G AK LEYLH+   P +++R+FK
Sbjct:  378 ITASQYTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPN-GKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFK 525          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.166e-21
Identity = 59/143 (41.26%), Postives = 78/143 (54.55%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNR-EFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            FT REL  AT NF  ++ +G GGFG+VYKG L + G +VAVK+L     +G   +F  E                G+C    +RLLVY +M  GS+   L + P    ALDW  R  IA G+A+GL YLHD  +  +I+RD K
Sbjct:  282 FTLRELLVATDNFSNKNVLGRGGFGKVYKGRL-ADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVK 423          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.523e-21
Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 3
Query:  447 FTFRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNR-EFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            F+ REL  AT +F  ++ +G GGFG+VYKG L + G +VAVK+L      G   +F  E                G+C    +RLLVY +M  GS+   L + PP +  L W+ R +IA G+A+GL YLHD  +P +I+RD K
Sbjct:  293 FSLRELQVATDSFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVK 434          
BLAST of CX671613 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.523e-21
Identity = 66/178 (37.08%), Postives = 89/178 (50.00%), Query Frame = 3
Query:  363 LRSRSNGVSKRELHLPKDGAGVNIAAQTFT--------FRELAAATKNFRPESFIGEGGFGRVYKGWLESTGQVVAVKQLDRNGLQGNREFLVEXXXXXXXXXXXXXXXIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 872
            L+ R N    +   L K     +IA   F+        F  L  AT NF  E+ +G GGFG VYKG     GQ +AVK+L  N  QG+ EF  E               IG+C  G++RLLVYEF+   SL+  + D    ++ LDW  R K+  G A+GL YLH+ +   +I+RD K
Sbjct:  309 LKWRKNKSGYKNKVLGKSPLSGSIAEDEFSNTESLLVHFETLKTATDNFSSENELGRGGFGSVYKGVFPQ-GQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFD-TEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLK 484          
The following BLAST results are available for this feature:
BLAST of CX671613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 220
Match NameE-valueIdentityDescription
SRF7_ARATH5.234e-2231.96Protein STRUBBELIG-RECEPTOR FAMILY 7 OS=Arabidopsi... [more]
ACCR3_ARATH5.234e-2235.64Putative serine/threonine-protein kinase-like prot... [more]
Y5596_ARATH6.835e-2239.60Probable LRR receptor-like serine/threonine-protei... [more]
CRK35_ARATH6.835e-2240.14Putative cysteine-rich receptor-like protein kinas... [more]
Y5181_ARATH8.927e-2236.00Probable LRR receptor-like serine/threonine-protei... [more]
ACCR2_ARATH8.927e-2242.36Serine/threonine-protein kinase-like protein CCR2 ... [more]
SRF8_ARATH1.166e-2138.26Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
SERK4_ARATH1.166e-2141.26Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK2_ARATH1.523e-2139.86Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
CRK29_ARATH1.523e-2137.08Cysteine-rich receptor-like protein kinase 29 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B06-D12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671613 ID=CX671613; Name=CX671613; organism=Citrus sinensis; type=EST; length=872bp
TTATCAGCTTAAAGTTATTTTTATTTCCTTCTGTTCTTGTTGGATTCATT
TGCTTTGTGCTAAGTGGATATATCGTGAAGGTGGTTTGTACCCAGATGGG
ATTGTTGTTTGGAATATTAACTGTTGTCTGAGTGTGAGAAAAAAAATCTG
CTTTTTTTTTTTTATAAGGATTTGAAAGATTTGATTTTTATTTTTTTTCC
CTTTTTGTGTGGCGGGTTTGATTTCGGGAGATGGGTTGTTTTCCTTGTTT
TGATTCGAGGGAAGATGAGAAGTTGAATCCAGAGAAAGAACCCGATGATC
AAAAGCAAGGACAACCAACGGTCTCCAATAACATTTCCAGATTGCCTTCT
GGAAGAGACAGACTTAGATCAAGAAGTAATGGAGTCTCGAAAAGGGAATT
GCACCTTCCCAAAGATGGGGCTGGTGTCAATATTGCTGCTCAAACATTTA
CATTTCGTGAGCTTGCTGCTGCAACAAAGAATTTTAGACCAGAGAGTTTC
ATAGGGGAAGGAGGATTTGGACGTGTGTACAAGGGGTGGCTTGAGAGCAC
TGGTCAGGTCGTTGCTGTCAAGCAATTGGATAGAAATGGCCTTCAGGGTA
ATAGGGAGTTTCTTGTGGAGGTCCTCATGCTTAGCCTTCTTCATCACTCT
AACCTAGTGAACTTGATTGGATATTGTGCTGATGGGGACCAACGGCTTCT
TGTCTACGAATTTATGCCTTTGGGATCCTTGGAAGATCACCTTCATGATT
TACCACCTGATAAGGAAGCACTTGATTGGAACACAAGAATGAAGATTGCA
GCTGGTGCTGCCAAAGGTTTGGAATACCTCCATGATAAAGCAAACCCTCC
AGTTATCTATAGGGACTTTAAG
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