CX671610

Overview
NameCX671610
Unique NameCX671610
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1387 contig Csv1_Contig1387:76..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 8.664e-42
Identity = 107/261 (41.00%), Postives = 132/261 (50.57%), Query Frame = 3
Query:   12 NWCLTSVS-QAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVKIGIPAKSKVFTEHGDKPFGDQCTYCE 791
            NWC  +V+ +A+SS I +S   P   A  +S +  P LIR  PV AAP                                    VA A ++                +VER+K GF  FK E Y+K P  +  L  GQ+PKYMVFAC+DSRVCPS  L  +PGEAF +RN+AN+VP Y + K              LKV  IVVIGHS CGGIK L+S     ++S  F+EDWV+IG PAK KV TE    PF DQCT  E
Sbjct:   73 NWCYATVAPRARSSTIAASLGTP---APSSSASFRPKLIRTTPVQAAP------------------------------------VAPALMDA---------------AVERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLE 279          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  333 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMS 662
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +              L+VS+IV+ GHS CG +  + S
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS 109          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.252e-16
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = 3
Query:  333 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMS 662
            ++ I +GF+ F+RE + K  AL+ +LA  QSP+ +  +CSDSR+ P  V   +PG+ FV+RN  NIVP Y   +              L+VS+IV+ GHS CG +  + S
Sbjct:    1 MKEIIDGFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYG-PEPGGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS 109          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14
Identity = 40/127 (31.50%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  333 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVK 713
            ++R+ EG   F+   +  +  L+ +L+ GQ P+ +   CSDSRV P+ +   + G+ FV+RN  NI+PPY                + L+++ I+V GHS CG +KGL+            + DW+K
Sbjct:    1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKLN-SLQEKLPLVYDWLK 125          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.540e-14
Identity = 39/127 (30.71%), Postives = 63/127 (49.61%), Query Frame = 3
Query:  333 VERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFTFDGNNSTDFIEDWVK 713
            + ++ EG  HF+   Y  +  L+ + AKGQ P+ +   CSDSR+ P+ +     GE FV+RN  N++PP+                  L + ++VV GHS CG +KGL+            + DW++
Sbjct:    1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAANGGEGASIEYAIAA-LNIEHVVVCGHSHCGAMKGLLKLN-QLQEDMPLVYDWLQ 125          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.627e-14
Identity = 46/126 (36.51%), Postives = 67/126 (53.17%), Query Frame = 3
Query:  306 PSDTKAF-----DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMSFT 668
            PSD KA       + ++I E    +   K   +P  +++LA GQSP+Y+   CSDSRV  + ++    GE FV RN+AN+VP  D +              HLKV +IVV GH  CGG++  ++ T
Sbjct:    4 PSDRKAVTRYLEQTHDKIFESNRAWVASKKGADPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTIDLSSMSVINYAVG----HLKVKHIVVCGHYNCGGVQAALTPT 125          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.431e-14
Identity = 43/107 (40.19%), Postives = 57/107 (53.27%), Query Frame = 3
Query:  342 IKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIKGLMS 662
            I +GF+ F+R+ Y     L+  LA  Q+PK +  ACSDSRV P  +   +PGE FV+RN  NIVP Y                + L V +IVV GHS CG +  + S
Sbjct:    4 IIDGFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQPGGVSASVEYAVAV-LGVGDIVVCGHSDCGAMGAIAS 109          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.304e-13
Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 3
Query:  351 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXL-HLKVSNIVVIGHSACGGIKGLMSFTFDGNN--STDFIEDWVKIGIPAKSKV 740
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   QPGE +V+RN+ N++PP    K            + H+ V N+++ GHS CG   G +    D      T +I +W++   P K ++
Sbjct:    6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGAC-GSIHLIHDETTKAKTPYIANWIQFLEPIKEEL 137          
BLAST of CX671610 vs. ExPASy Swiss-Prot
Match: CYNT_HELPY (Carbonic anhydrase OS=Helicobacter pylori GN=cynT PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.220e-11
Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = 3
Query:  351 GFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXL-HLKVSNIVVIGHSACGGIKGLMSFTFDGNN--STDFIEDWVKIGIPAKSKV 740
            G + F+  +YE+   LY  L   Q P  +  +C DSRV P+ +   +PGE +V+ N+ N+ PP    K            + H+ V N+++ GHS CG   G +    D      T +I +W++   P K ++
Sbjct:    6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGAC-GSVHLIHDETTKAKTPYIANWIQFLEPVKEEL 137          
The following BLAST results are available for this feature:
BLAST of CX671610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
CAHC_HORVU8.664e-4241.00Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_ECOLI6.252e-1639.09Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO576.252e-1639.09Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_SYNY31.179e-1431.50Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]
CYNT_SYNE71.540e-1430.71Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CAN_EMENI2.627e-1436.51Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]
CYNT_PSEAE3.431e-1440.19Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_HELPJ1.304e-1330.83Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]
CYNT_HELPY1.220e-1129.32Carbonic anhydrase OS=Helicobacter pylori GN=cynT ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671610 ID=CX671610; Name=CX671610; organism=Citrus sinensis; type=EST; length=792bp
CTTCGATCAATAACTGGTGCCTTACTTCTGTTTCTCAAGCTCAATCCTCT
CTCATCAAAAGCTCCACATTACGTCCCTCCATCGTTGCAAGGCTCAACTC
TCCTGCTTCTCCTCCTAGCCTCATCCGAAACGAGCCCGTTTTTGCTGCAC
CAGCTCCTATCATCAACCCTAACTGGAGGGAAGACATGGCAAATCAGTCG
TACGAGGAAGCCATTGAAGCTCTCAAGAAACTTCTCAAGGAGAAGGAAGA
CTTGAAACCTGTTGCTGCTGCAAAAGTAGAGCAGATTACTGCGCAGCTAC
AGACTCCATCTGACACCAAAGCATTTGATTCCGTGGAGAGGATCAAAGAG
GGCTTCATTCACTTCAAGAGAGAAAAATACGAGAAAAATCCAGCTCTGTA
CTCTGAGCTCGCCAAAGGCCAAAGCCCGAAGTATATGGTATTTGCCTGCT
CAGACTCCAGGGTTTGCCCGTCCCATGTGTTGGATTTTCAACCTGGGGAA
GCTTTCGTGGTTCGCAATGTTGCTAACATTGTTCCACCCTATGATCAGAC
TAAATATGCTGGAGTTGGAGCTGCTGTCGAGTATGCAGTTTTGCATCTCA
AGGTTTCAAACATTGTGGTCATTGGGCACAGCGCCTGTGGTGGCATCAAA
GGACTCATGTCTTTCACATTTGATGGAAACAACTCCACCGATTTCATTGA
AGACTGGGTGAAAATTGGCATCCCTGCCAAGTCTAAGGTGTTTACAGAGC
ATGGTGACAAGCCTTTTGGAGACCAATGCACATACTGTGAAA
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