CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:667..1508. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.468e-39
Identity = 83/189 (43.92%), Postives = 114/189 (60.32%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 843
            S+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  143 SSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATK_HUMAN (Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.468e-39
Identity = 83/189 (43.92%), Postives = 114/189 (60.32%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 843
            S+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ N G+D+E+AYPY G++  C ++      +      I  G E  L+ AV  V PVSVA +  +  F+FY  GVY    C +   ++NHAV+AVGYG++ G  +W+IKNSWGENWG+ GY  M   K N CGIA  AS+P
Sbjct:  143 SSVGALEGQLKKKTGKLLNLSPQNLVDCVS--ENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSD--NLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLASFP 327          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.954e-39
Identity = 82/189 (43.39%), Postives = 113/189 (59.79%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 843
            S+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ NGG+D+E+AYPY G+D  C +++     +      I +G E  L+ AV  V PVSV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  YW+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  143 SSAGALEGQLKKKTGKLLALSPQNLVDCVS--ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGNKYWIIKNSWGESWGNKGYVLLARNKNNACGITNLASFP 327          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.698e-38
Identity = 87/193 (45.08%), Postives = 110/193 (56.99%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYG----VEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 843
            +  G++E       G    LS Q L+DC++   N+GC  G   QAFEY+  N GL+ E  YPY GKDG C++ SEN    + D VN+    E  L  AV  + PVS A +   D FRFY  G+Y    C +    VNHAV+ VGYG    V+DG  YWLIKNSWGE WG +GY ++     N CGIA+ ASYP
Sbjct:  142 AAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVGNKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKDGPCRYRSENASANITDYVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSS--YFVNHAVLVVGYGSEGDVKDGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASLASYP 331          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.896e-38
Identity = 84/192 (43.75%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQA-FNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S  G+LEA      GK +SLS Q LVDC+ A + N+GCNGG  ++AF+YI  N G+D+E +YPY   DG C++  +N        + +  G+E+ L+ AV    PVSV  +     F  YK+GVY    C     +VNH V+ VGYG  DG  YWL+KNSWG ++GD GY +M     N CGIA   SYP +
Sbjct:  143 SAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSC---TQNVNHGVLVVGYGNLDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGIANYPSYPEI 331          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.452e-38
Identity = 84/192 (43.75%), Postives = 112/192 (58.33%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D+E +YPY   +G C++ S+           +  G+ED L+ AV    PVSVA +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+GD GY +M     N CGIA+  SYP +
Sbjct:  143 SAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMNGKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGNLNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPSYPEI 331          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.426e-38
Identity = 80/189 (42.33%), Postives = 113/189 (59.79%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 843
            S+ G+LE    +  GK ++LS Q LVDC     N GC GG  + AF+Y++ NGG+D+E+AYPY G+D  C +++     +      I +G E  L+ AV  V P+SV+ +  +  F+FY  GVY    C     +VNHAV+ VGYG + G  +W+IKNSWGE+WG+ GY  +   K N CGI   AS+P
Sbjct:  143 SSAGALEGQLKKKTGKLLALSPQNLVDCVT--ENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRD--NVNHAVLVVGYGTQKGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMASFP 327          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37
Identity = 87/200 (43.50%), Postives = 120/200 (60.00%), Query Frame = -1
Query:  262 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNM----CGIATCASYPVVA*SAP 843
            S   ++E+      G+ I+LSEQ+LV+C+    N GCNGGL   AF++I  NGG+DTE+ YPY   DG C  + EN  V  +D   ++    E  LQ AV   +PVSVA E     F+ Y SGV+S  +CG +   ++H VVAVGYG ++G  YW+++NSWG  WG+ GY +ME   N+    CGIA  ASYP  + + P
Sbjct:  169 SAVSTVESINQLVTGEMITLSEQELVECSTNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKVVSIDGFEDVPQNDEKSLQKAVA-HQPVSVAIEAGGREFQLYHSGVFSG-RCGTS---LDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVTTGKCGIAMMASYPTKSGANP 363          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37
Identity = 87/194 (44.85%), Postives = 119/194 (61.34%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 843
            S   ++E       G  ISLSEQ+LVDC  ++N +GCNGGL   AF++I  NGG+DTE+ YPY GKD  C  + +N  V  +DS  ++T  +E  LQ AV   +PVSVA E     F+ Y SG+++  KCG     ++H V AVGYG E+G  YW+++NSWG++WG+ GY +ME         CGIA   SYP+
Sbjct:  157 SAIAAVEGINQIVTGDLISLSEQELVDCDTSYN-EGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVA-NQPVSVAIEAGGRAFQLYSSGIFTG-KCGTA---LDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKASSGKCGIAVEPSYPL 344          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.437e-37
Identity = 88/194 (45.36%), Postives = 122/194 (62.89%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 843
            ST  ++E       G+ +SLSEQ+LVDC +++N QGCNGGL   AF++I  NGGL+TE+ YPY G +G C    +N  V  +D   ++    E  L+ AV   +PVSVA +     F+ Y+SG+++  KCG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME         CGIA  ASYPV
Sbjct:  128 STAAAVEGINKIVTGELVSLSEQELVDCDKSYN-QGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSY-QPVSVAIDAGGRAFQHYQSGIFTG-KCGT---NMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVASKSGKCGIAIEASYPV 315          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CATK_MACFA4.468e-3943.92Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATK_HUMAN4.468e-3943.92Cathepsin K OS=Homo sapiens GN=CTSK PE=1 SV=1[more]
CATK_RAT9.954e-3943.39Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]
CATJ_MOUSE1.698e-3845.08Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATS_BOVIN2.896e-3843.75Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATS_CANFA6.452e-3843.75Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATK_MOUSE8.426e-3842.33Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
ORYB_ORYSJ1.101e-3743.50Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
ORYA_ORYSJ1.101e-3744.85Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CYSP4_BRANA1.437e-3745.36Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
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