CX671609

Overview
NameCX671609
Unique NameCX671609
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.437e-37
Identity = 82/189 (43.39%), Postives = 109/189 (57.67%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-KNMCGIATCASYP 843
            S+ G+LE    +  GK +SLS Q LV C    NN GC GG  + AFEY++ N G+D+E+AYPY G+D  C +S      +      I    E  L+ AV  + PVSV  +  +  F+FY  GVY  T C   P ++NHAV+AVGYG + G  +W+IKNSWG  WG+ GY  +    K  CGIA  AS+P
Sbjct:  148 SSVGALEGQLKRRTGKLLSLSPQNLVYCVS--NNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGC--NPENINHAVLAVGYGAQKGTKHWIIKNSWGTEWGNKGYVLLARNMKQTCGIANLASFP 332          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.452e-37
Identity = 89/195 (45.64%), Postives = 122/195 (62.56%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG-----KNMCGIATCASYPV 843
            STT ++E       G+ ISLSEQ+LVDC +++N QGCNGGL   AF++I  NGGL+TE+ YPY G  G C    +N  V  +D   ++    E  L+ A+   +PVSVA E     F+ Y+SG+++ + CG    +++HAVVAVGYG E+GV YW+++NSWG  WG+ GY +ME          CGIA  ASYPV
Sbjct:  173 STTAAVEGINKIVTGELISLSEQELVDCDKSYN-QGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISY-QPVSVAIEAGGRIFQHYQSGIFTGS-CGT---NLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASYPV 361          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.202e-37
Identity = 83/193 (43.01%), Postives = 113/193 (58.55%), Query Frame = -1
Query:  277 TGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 837
            TG++E    +  GK I LS Q L+DC++   N+GC  G    AF+Y+ +NGGL+ E  YPY  K+GVC+++ +N   ++   V +   +ED L  AV    P++    V+   FRFY+ GVY   KC +    VNHAV+ VGYG E    DG  YWLIKNSWG+ WG  GY K+   + N C IA+ A YP V
Sbjct:  155 TGAIEGQMFKKTGKLIPLSVQNLIDCSKPQGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKEGVCRYNPKNSSAKITGFV-VLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSY---VNHAVLVVGYGFEGNETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASLAQYPTV 343          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.182e-37
Identity = 81/191 (42.41%), Postives = 109/191 (57.07%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S  G+LEA      GK +SLS Q LVDC++ + N+GCNGG  ++AF+YI  N G+D+E +YPY   D  C++ S+           +  G ED L+ AV    PV V  +     F  Y+SGVY    C      VNH V+ +GYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  143 SAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPAC---TQKVNHGVLVIGYGDLNGKEYWLVKNSWGSNFGEQGYIRMARNKGNHCGIASYPSYPEI 330          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36
Identity = 83/194 (42.78%), Postives = 119/194 (61.34%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM----EMGKNMCGIATCASYPV 843
            ST G++E       G  I+LSEQ+LVDC  ++N +GCNGGL   AFE+I  NGG+DT++ YPY G DG C    +N  V  +DS  ++   +E+ L+ AV   +P+S+A E     F+ Y SG++  + CG     ++H VVAVGYG E+G  YW+++NSWG++WG+ GY +M          CGIA   SYP+
Sbjct:  165 STIGAVEGINQIVTGDLITLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAH-QPISIAIEAGGRAFQLYDSGIFDGS-CGT---QLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASSSGKCGIAIEPSYPI 352          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36
Identity = 85/193 (44.04%), Postives = 108/193 (55.96%), Query Frame = -1
Query:  283 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYP 843
            +  G++E       G    LS Q L+DC+++  N GC  G   QAF Y+  N GL+ E  YPY GKDG C++ SEN    +   VN+    E  L  AV  + PVS A +   D FRFY  GVY    C +    VNHAV+ VGYG E    DG  YWLIKNSWGE WG +G+ K+   + N CGIA+ AS+P
Sbjct:  142 AAVGAIEGQMFSKTGNLTPLSVQNLLDCSKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKDGPCRYHSENASANITGFVNLPPN-ELYLWVAVASIGPVSAAIDASHDSFRFYSGGVYHEPNCSS--YVVNHAVLVVGYGFEGNETDGNNYWLIKNSWGEEWGINGFMKIAKDRNNHCGIASQASFP 331          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.589e-36
Identity = 82/193 (42.49%), Postives = 112/193 (58.03%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 843
            S   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I  NGG++TEE YPYT +DG C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     ++HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  155 SAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNLDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKHYSSGIFTG-PCGTA---IDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 152.525 bits (384), Expect = 2.711e-36
Identity = 83/193 (43.01%), Postives = 112/193 (58.03%), Query Frame = -1
Query:  280 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSV-NITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEM---GKNMCGIATCASYPV 843
            S   ++E       G  ISLSEQ+L+DC +  N +GCNGG  +  F++I  NGG++TEE YPYT +DG C    +N     +D+  N+    E  LQ AV   +PVSVA +   D F+ Y SG+++   CG     V+HAV  VGYG E G+ YW++KNSW   WG+ GY ++     G   CGIAT  SYPV
Sbjct:  155 SAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECNVDLQNEKYVTIDTYENVPYNNEWALQTAV-TYQPVSVALDAAGDAFKQYSSGIFTG-PCGTA---VDHAVTIVGYGTEGGIDYWIVKNSWDTTWGEEGYMRILRNVGGAGTCGIATMPSYPV 342          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.624e-36
Identity = 80/195 (41.03%), Postives = 113/195 (57.95%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            + TG++EA      GK   LS Q LVDC++   N GC GG    AF+Y+ +NGGL++E  YPY GKDG C+++ +N   ++   V++   +ED L  AV  + P++   +   + F+ YK G+Y    C +    V H V+ VGYG +    DG  YWLIKNSWG+ WG  GY K+   K N CGIA+ A YP +
Sbjct:  143 AVTGAIEAQAIWQTGKLTPLSVQNLVDCSKPQGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKAEITGFVSLP-QSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSD--TVTHGVLVVGYGFKGIETDGNHYWLIKNSWGKRWGIRGYMKLAKDKNNHCGIASYAHYPTI 334          
BLAST of CX671609 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 6.039e-36
Identity = 82/192 (42.71%), Postives = 110/192 (57.29%), Query Frame = -1
Query:  277 STTGSLEAAYHQAFGKGISLSEQQLVDCA-QAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFSSENVGVQVLDSVNITLGAEDELQHAVGLVRPVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 843
            S  G+LEA      GK +SLS Q LVDC+ + + N+GCNGG  + AF+YI  N G+D++ +YPY   D  C++ S+           +  G ED L+ AV    PVSV  +     F  Y+SGVY    C     +VNH V+ VGYG  +G  YWL+KNSWG N+G+ GY +M   K N CGIA+  SYP +
Sbjct:  143 SAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC---TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPSYPEI 331          
The following BLAST results are available for this feature:
BLAST of CX671609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
CATK_CHICK1.437e-3743.39Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
GCP1_ARATH2.452e-3745.64Germination-specific cysteine protease 1 OS=Arabid... [more]
CATQ_RAT3.202e-3743.01Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATS_SAIBB4.182e-3742.41Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
RD21A_ARATH1.589e-3642.78Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CATJ_RAT1.589e-3644.04Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
ACTN_ACTDE1.589e-3642.49Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
ACTN_ACTCH2.711e-3643.01Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CATR_MOUSE4.624e-3641.03Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATS_HUMAN6.039e-3642.71Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B04-D8-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671609 ID=CX671609; Name=CX671609; organism=Citrus sinensis; type=EST; length=843bp
TTTTTTTTTTTTTTTTTGCATTGACAAAATATATATAACATCGNTTGGTG
TCCTAGTCACAATGACTGTTTACATGGACATAGATCTCAGAATTTATTTT
GAACATCAAGCAGCCATGCATTGCTATTGTAGATTATATGGACATTAATC
TCCGAATTTATTTCGTACATAAAGCCAACCATTCTGCTATCATTCTTGAG
TGAAATAATATAAGTTTTATGAGCAAATGACTTGCTGATAGCCAGATCCA
ACTATTTCTTCAGGAGCAGACTAAGCCACAACTGGGTATGATGCACAAGT
TGCAATACCACACATGTTCTTCCCCATCTCCATCTTAAAGTAGCCATGAT
CGCCCCAGTTCTCTCCCCAAGAGTTCTTAATCAGCCAATATGGAACACCA
TCTTCAACTCCGTACCCAACAGCAACGACGGCATGGTTCACATCCATGGG
AGTATTTCCACATTTAGTGCTGCTGTAAACTCCACTCTTGTAAAATCGGA
ATCCATCTACTACTTCAAATGCCACACTCACAGGTCGAACAAGACCAACT
GCATGCTGTAATTCATCTTCAGCACCCAAGGTAATGTTGACTGAGTCCAG
GACTTGGACGCCAACATTTTCAGATGAGAATTTGCAGACACCATCTTTTC
CGGTGTAGGGATATGCTTCCTCAGTATCAAGGCCACCATTGTACTTGATG
TATTCAAAGGCTTGGGATGGCAACCCACCATTGCATCCCTGGTTGTTGAA
AGCTTGGGCACAGTCTACAAGCTGCTGTTCTGACAAAGAGATACCCTTTC
CAAAGGCCTGGTGGTAAGCAGCCTCAAGAGATCCAGTCGTGCT
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