CX671605

Overview
NameCX671605
Unique NameCX671605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:109..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.087e-53
Identity = 107/244 (43.85%), Postives = 141/244 (57.79%), Query Frame = 1
Query:    7 EHPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCP-KMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDS--------MPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            +H  KA G AA D SGHL+P   SRR+TGD+DV +KVLYCGICH+DL  IKNEW  +++P+V GHEI G VTE                      C  CESC +  ENYC   ++ TY+S++ DGT T+GGYSD +V ++R++VRFP S        +PLD+ APLLCAG+TVY+P++  GL E                              ISTSP K+ EALE LGAD F+ S +  +++
Sbjct:   18 QHTRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVVAGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVDRDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGLCEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASEMK 261          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.338e-53
Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            G+AARDSSGHLSP+ ++ R  G EDV ++V+YCGICH+DL  + NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TVYSP+K+FG+ E                              IS+S  KK EALE LGAD++L S+D +++Q
Sbjct:   12 GYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQ 239          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.338e-53
Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            G+AARDSSGHLSP+ ++ R  G EDV ++V+YCGICH+DL  + NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TVYSP+K+FG+ E                              IS+S  KK EALE LGAD++L S+D +++Q
Sbjct:   12 GYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQ 239          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.971e-53
Identity = 100/231 (43.29%), Postives = 137/231 (59.31%), Query Frame = 1
Query:   19 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            KA GWAARD SG LSP++++ R TG +DV +KV+ CGICHTD+  IKN+ G S +PMVPGHE+ GEV E                      C SC+ C+++LE YC K I +Y+ + TDG  T GG++D M+ N++++V+ P+ M ++ AAPLLCAG+TVYSPL +FGL                                IS+S  KK EA+EHLGAD ++ S DP ++Q
Sbjct:   10 KALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYNDVYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQ 240          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 106/237 (44.73%), Postives = 137/237 (57.81%), Query Frame = 1
Query:   10 HPVKAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAE---QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            H     GWAA D SG + PF F RRE G +DV +KV YCG+CHTDL  I N+WG +++P+VPGHEI G VT+                     +C  CE C    ENYC K+ LTY+ I  DG+IT+GGYS  +VA++R++VR PD++PLDAAAPLLCAGITVYSP+K  G+ +                                 ISTSP+K+ EA E+L AD+F+ S D  Q+Q
Sbjct:    7 HTQTVSGWAAMDESGKIVPFVFKRRENGVDDVTIKVKYCGMCHTDLHFIHNDWGITMYPVVPGHEITGVVTKVGTNVAGFKVGDRVGVGCIAASCLDCEHCRRSEENYCDKVALTYNGIFWDGSITYGGYSGMLVAHKRFVVRIPDTLPLDAAAPLLCAGITVYSPMKQHGMLQADAAGRRLGVVGLGGLGHVAVKFGKAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQ 243          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 2.649e-52
Identity = 98/231 (42.42%), Postives = 136/231 (58.87%), Query Frame = 1
Query:   19 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            K  GWAA DS+GHL+P+ +S R+TG EDV +KV+ CG+CHTD+  IKN+ G S +PMVPGHE+ GEV E                     +C +C  C +++E YC K I +Y+ + TDG  T GG+++ MV +++++VR PD M  + AAPLLCAG+TVYSPLK+FGL +                              IS+S  K+ EA+EHLGAD +L S D + +Q
Sbjct:    9 KIVGWAATDSTGHLAPYTYSLRDTGPEDVFIKVISCGVCHTDIHQIKNDLGMSHYPMVPGHEVVGEVVEVGSDVTRFKVGDVVGVGVIVGSCKNCHPCKSEIEQYCNKKIWSYNDVYTDGKPTQGGFAESMVVHQKFVVRIPDGMSPEQAAPLLCAGLTVYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQ 239          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.519e-52
Identity = 103/232 (44.40%), Postives = 134/232 (57.76%), Query Frame = 1
Query:   19 KAFGWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAE-QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            K  GWAARD SG LSP+ ++ RETG EDV +K++YCGICHTD+  IKN+ G S +PMVPGHE+ GEV E                      C +C  C  D+E YC K I +Y+ + TDG  T GG+S HMV +++++V+ PD M  + AAPLLCAG+TVYSPL +FGL E                               IS+S  KK EA++HLGAD++L S D  Q+Q
Sbjct:    9 KTTGWAARDPSGVLSPYTYTLRETGPEDVFIKIIYCGICHTDIHQIKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTCRPCKADVEQYCNKKIWSYNDVYTDGKPTQGGFSGHMVVDQKFVVKIPDGMAPEQAAPLLCAGVTVYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQ 240          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51
Identity = 97/227 (42.73%), Postives = 137/227 (60.35%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQL 708
            G+AARDSSGHLSP+ ++ R+ G EDV +KV+YCGICH+DL  ++NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TV+SP+K+F + E                              IS+S  KK EA+E LGAD++L S+D +++
Sbjct:   12 GYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKM 238          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.717e-51
Identity = 97/227 (42.73%), Postives = 137/227 (60.35%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQL 708
            G+AARDSSGHLSP+ ++ R+ G EDV +KV+YCGICH+DL  ++NE G S +PMVPGHE+ G VTE                     +C SC +C   +E YC K I TY+ +N DGT T GG++  MV ++ ++VR P+++PL+ AAPLLCAG+TV+SP+K+F + E                              IS+S  KK EA+E LGAD++L S+D +++
Sbjct:   12 GYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGMSHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKM 238          
BLAST of CX671605 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.524e-50
Identity = 97/228 (42.54%), Postives = 129/228 (56.58%), Query Frame = 1
Query:   28 GWAARDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTSPSKKTEALEHLGADSFLNSRDPDQLQ 711
            GWAARD SG LSP+ ++ R TG EDV +KVLYCG+CHTDL  +KN+ G S +P+VPGHE+ GEV E                     +C +C  C  D+E YC K I   + + TDG  T GG++  MV +++++V+ P+ M  + AAPLLCAGITVYSPL +FG  +                              IS+S  K+ EALEHLGAD +L S D D++Q
Sbjct:   12 GWAARDPSGVLSPYTYTLRNTGPEDVEVKVLYCGLCHTDLHQVKNDLGMSNYPLVPGHEVVGEVVEVGPDVSKFKVGDTVGVGLLVGSCRNCGPCKRDIEQYCNKKIWNCNDVYTDGKPTQGGFAKSMVVDQKFVVKIPEGMAPEQAAPLLCAGITVYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQ 239          
The following BLAST results are available for this feature:
BLAST of CX671605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
CADH7_ORYSJ4.087e-5343.85Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH7_PICAB5.338e-5343.86Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB5.338e-5343.86Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH4_ARATH6.971e-5343.29Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH6_ORYSJ2.028e-5244.73Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CADH_POPDE2.649e-5242.42Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH1_ARACO4.519e-5244.40Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH_PINTA1.717e-5142.73Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]
CADH_PINRA1.717e-5142.73Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH1_TOBAC5.524e-5042.54Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12B01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12B01-D2-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671605 ID=CX671605; Name=CX671605; organism=Citrus sinensis; type=EST; length=711bp
GAAGAAGAACATCCAGTAAAGGCCTTCGGGTGGGCAGCCCGAGACAGCTC
CGGCCATCTCTCCCCATTCAACTTCTCCAGAAGGGAAACGGGTGATGAGG
ATGTGAGGCTGAAGGTATTGTATTGTGGGATCTGCCATACTGATCTCGCC
AACATCAAGAATGAATGGGGCTTCTCTCTCTTCCCTATGGTTCCTGGGCA
TGAAATTGCAGGGGAAGTGACAGAAGTTGGTAGCAAAGTAAGAAAGGTTA
AAGTGGGAGATAAAGTTGGAGTTGGATGCATGGTTGGTGCATGCCACAGC
TGCGAGAGCTGTGCCAATGACCTTGAAAATTACTGTCCGAAAATGATACT
CACCTACAGTTCCATTAACACTGACGGAACAATCACATTCGGAGGCTACT
CTGATCACATGGTTGCCAATGAGCGCTACATTGTTCGATTCCCTGATAGC
ATGCCCCTTGATGCTGCTGCTCCTCTGCTTTGCGCCGGGATTACCGTGTA
CAGTCCATTGAAATACTTTGGACTAGCAGAACAAGGAAAGCATGTAGGCA
TCGTTGGCCTTGGCGGGCTTGGTCATGTCGCTGTCAAATTTGCCAAGGCT
TTTGGGGCCAAAGTGACAGTAATTAGCACCTCTCCAAGCAAGAAGACTGA
AGCTCTTGAACATCTTGGCGCTGATTCATTTTTGAATAGCCGTGACCCTG
ACCAATTGCAG
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