EY680240

Overview
NameEY680240
Unique NameEY680240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A1_HUMAN (Eukaryotic initiation factor 4A-I OS=Homo sapiens GN=EIF4A1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.932e-21
Identity = 71/195 (36.41%), Postives = 110/195 (56.41%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580
            D+NLS  LL+G+Y    F+KPS IQ  + LP I      ++IAQA++G+GKT  F + +L +++ +LKA QAL + PTRELA Q  +V+  +G + G  + C      TN    + K       +++GTPG +   ++ + L    +K+ V DEAD ML   GF+D   +I    ++ + + QV+L SAT    V
Sbjct:   36 DMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD---QIYDIFQKLNSNTQVVLLSATMPSDV 220          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A1_BOVIN (Eukaryotic initiation factor 4A-I OS=Bos taurus GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.932e-21
Identity = 71/195 (36.41%), Postives = 110/195 (56.41%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAIS-LPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580
            D+NLS  LL+G+Y    F+KPS IQ  + LP I      ++IAQA++G+GKT  F + +L +++ +LKA QAL + PTRELA Q  +V+  +G + G  + C      TN    + K       +++GTPG +   ++ + L    +K+ V DEAD ML   GF+D   +I    ++ + + QV+L SAT    V
Sbjct:   36 DMNLSESLLRGIYA-YGFEKPSAIQQRAILPCIKG---YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD---QIYDIFQKLNSNTQVVLLSATMPSDV 220          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: FAL1_CRYNE (ATP-dependent RNA helicase FAL1 OS=Cryptococcus neoformans GN=FAL1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.932e-21
Identity = 68/198 (34.34%), Postives = 111/198 (56.06%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            LNL  +LL+G+Y    F+KPS IQ  ++  I+    R++IAQA++G+GKT  F + ML  +D NL+  QAL + PTRELA+Q   V+  +G +  ++  C      T+     ++     QVV GTPG +   +  + L    +K+L+ DE+D +L++ GF+D    I + +  ++   QV++ SAT    V    T+
Sbjct:   28 LNLKEDLLRGIYA-YNFEKPSAIQQRAIIPIIRG--RDVIAQAQSGTGKTATFSISMLQSIDTNLRETQALVLSPTRELAVQIQTVVLALGDYMNVS--CHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK-GFKDQIYDIYRYLPPAT---QVVVVSATLPHDVLEMTTK 216          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 68/194 (35.05%), Postives = 109/194 (56.19%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNY-VPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580
            D+NLS  LL+G+Y    F+KPS IQ  ++   +     ++IAQA++G+GKT  F + +L +++ +LKA QAL + PTRELA Q  +V+  +G + G  + C      TN    + K       +++GTPG +   ++ + L    +K+ V DEAD ML   GF+D   +I    ++ + + QV+L SAT    V
Sbjct:   36 DMNLSESLLRGIYA-YGFEKPSAIQQRAILSCIKG--YDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMG--ASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKD---QIYDIFQKLNSNTQVVLLSATMPSDV 220          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.523e-21
Identity = 72/200 (36.00%), Postives = 103/200 (51.50%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIER----SSGHCQVLLFSATFNETVKNF 589
            +  L  +LL G++ E  F+KPS IQ  S+P+ LT   R+++A+A+NG+GKT  FV+  L  ++P +   Q L + PTRELA+Q  +V + +GKH GI     V T  T       R      +V+GTPG I           S   + + DEAD +L        S+     IE+         QV+LFSATF  +VK F
Sbjct:   40 NFGLKRDLLMGIF-EAGFEKPSPIQEESIPVALTG--RDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGI--NVMVTTGGTTLRDDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL--------SIEFTPVIEQLLQFHPKDRQVMLFSATFPISVKEF 226          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica GN=Os02g0641800 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 73/199 (36.68%), Postives = 111/199 (55.78%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLK---ILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D  L  ELL G+Y E  F++PS IQ  S+P+ LT    +++A+A+NG+GKT  F +  L ++D    A Q + + PTRELA+Q  +V +++GKH  I  +  V T  T+      R      +++GTPG I   +   K G   LK   +L+ DEAD +L    F+    ++++ +  S    Q+L+FSATF  TVK F
Sbjct:  138 DYFLKRELLMGIY-EKGFERPSPIQEESIPIALTGS--DILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKI--QVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRI---LDLTKKGICILKDCSMLIMDEADKLLSPE-FQPSVEQLIRYLPASR---QILMFSATFPVTVKEF 324          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 74/199 (37.19%), Postives = 109/199 (54.77%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLK---ILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D  L  ELL G+Y E  F++PS IQ  S+P+ LT    +++A+A+NG+GKT  F +  L ++D +  A Q + + PTRELA+Q  +V +++GKH  I  +  V T  T+      R      +++GTPG I   +   K G   LK   +LV DEAD +L      +    I + I     + Q+L+FSATF  TVK F
Sbjct:  128 DYFLKRELLMGIY-EKGFERPSPIQEESIPIALTGS--DILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKI--QVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRI---LDLTKKGVCVLKNCSMLVMDEADKLLSP----EFQPSIQELIRYLPSNRQILMFSATFPVTVKEF 314          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 65/193 (33.68%), Postives = 109/193 (56.48%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEA-GFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580
            +NL  +LL+G+Y    F+ PS IQ+ ++  I++   +++IAQA++G+GKT  F +G+L  +D   K  QAL + PTRELA Q  +V++ +G +  + +  A+    T    + K      Q V GTPG +   +  + L    +++LV DEAD +L E  GF+     I   + +   +CQV++ SAT N+ +
Sbjct:   28 MNLKDDLLRGIY-SYGFEAPSSIQSRAITQIISG--KDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNA-FAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPK---NCQVVVVSATMNKDI 213          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 65/193 (33.68%), Postives = 109/193 (56.48%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEA-GFRDDSLRIMKDIERSSGHCQVLLFSATFNETV 580
            +NL  +LL+G+Y    F+ PS IQ+ ++  I++   +++IAQA++G+GKT  F +G+L  +D   K  QAL + PTRELA Q  +V++ +G +  + +  A+    T    + K      Q V GTPG +   +  + L    +++LV DEAD +L E  GF+     I   + +   +CQV++ SAT N+ +
Sbjct:   28 MNLKDDLLRGIY-SYGFEAPSSIQSRAITQIISG--KDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNA-FAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPK---NCQVVVVSATMNKDI 213          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAP (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Schizaphis graminum GN=deaD PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.295e-21
Identity = 74/199 (37.19%), Postives = 102/199 (51.26%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRP-PVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            L L+P ++K L  +M + KPS IQA  +P++L    R+++  A+ GSGKT  F L +L  ++ NLKAPQ L + PTRELA+Q  E      K+  I     +P        +  R      Q+V+GTPG +   +    L  S L  LV DEAD ML   GF +D   IM  I +     Q  LFSAT  E ++    R
Sbjct:   11 LGLNPFIIKSLS-KMGYVKPSPIQAACIPLLLEG--RDVLGMAQTGSGKTAAFSLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKY--IMGIHVLPLYGGQRYEVQLRALRQGPQIVVGTPGRLLDHLKRGTLNLSNLYALVLDEADEML-RMGFIEDVETIMSQIPKEH---QTALFSATMPEAIRRISKR 200          
The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A1_HUMAN1.932e-2136.41Eukaryotic initiation factor 4A-I OS=Homo sapiens ... [more]
IF4A1_BOVIN1.932e-2136.41Eukaryotic initiation factor 4A-I OS=Bos taurus GN... [more]
FAL1_CRYNE1.932e-2134.34ATP-dependent RNA helicase FAL1 OS=Cryptococcus ne... [more]
IF4A1_PONAB2.523e-2135.05Eukaryotic initiation factor 4A-I OS=Pongo abelii ... [more]
DHH1_MAGGR2.523e-2136.00ATP-dependent RNA helicase DHH1 OS=Magnaporthe gri... [more]
RH8_ORYSJ3.295e-2136.68DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sat... [more]
RH6_ORYSJ3.295e-2137.19DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sat... [more]
FAL1_YEAST3.295e-2133.68ATP-dependent RNA helicase FAL1 OS=Saccharomyces c... [more]
FAL1_YEAS73.295e-2133.68ATP-dependent RNA helicase FAL1 OS=Saccharomyces c... [more]
DEAD_BUCAP3.295e-2137.19Cold-shock DEAD box protein A homolog OS=Buchnera ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bp
AGATTTGAATCTCTCACCAGAGCTCCTAAAGGGATTATACGTGGAAATGA
AATTCCAGAAGCCTAGCAAGATTCAAGCCATCAGTTTGCCTATGATCTTG
ACTCCTCCCTACAGAAATTTGATTGCTCAGGCACGTAATGGTTCTGGCAA
GACGACTTGTTTTGTGCTTGGGATGTTGAGCCGTGTTGATCCAAACCTCA
AGGCTCCACAAGCACTTTGCATTTGTCCTACCAGAGAATTGGCAATTCAG
AATTTGGAGGTTCTTCGTAAGATGGGGAAGCACACAGGGATAACTTCAGA
ATGTGCTGTGCCAACAGACAGCACCAATTATGTGCCAATATCAAAAAGGC
CACCAGTTACAGCACAAGTAGTGATTGGCACTCCTGGTACCATTAAGAAA
TGGATGTCAGCAAAGAAATTGGGTTTCAGTCGTTTGAAAATTCTTGTGTA
TGATGAGGCCGATCACATGCTTGATGAGGCTGGCTTTAGAGATGATTCTT
TGAGGATTATGAAGGACATTGAAAGAAGCAGTGGTCATTGCCAGGTTCTT
CTATTTTCAGCCACATTCAACGAAACTGTCAAGAATTTTGTAACAAGGAT
TTGTTAAAGATTATAATCAACTTTTTGTCAAGAAAAAAGAGTTGTCATTT
AAAATCAGTAAAGCAGTATAAAGTTTTACTGTCCCGACGAACTTGCCAAG
GTTATGGTAATCAGGGGAAAAATTTTTGGAACTGGGAAAAAAAAAGGGGC
AAAAAATTATATTTTTGCCCCACAAAAAAAATTGGAAAGCGCCTTGCCAA
AAACCCTTTAAAAAATTTGGGTTAAAAAAGCCCCAAAAATTTAGGGGGGG
CCAAAA
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