EY680240

Overview
NameEY680240
Unique NameEY680240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DD19A_BOVIN (ATP-dependent RNA helicase DDX19A OS=Bos taurus GN=DDX19A PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.280e-37
Identity = 88/202 (43.56%), Postives = 130/202 (64.36%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601
            +L L P+LL+G+Y  M F +PSKIQ  +LPM+L  P +NLIAQ+++G+GKT  FVL MLSRV+P  + PQ LC+ PT ELA+Q  +V+ +MGK H  +    AV  +      + +   ++  +VIGTPGT+  W S  K +   ++K+ V DEAD M+   G +D S+RI + + R   +CQ+LLFSATF ++V  F  ++
Sbjct:   95 ELRLKPQLLQGVYA-MGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNK-----LERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR---NCQMLLFSATFEDSVWKFAQKV 287          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_DEBHA (ATP-dependent RNA helicase DBP5 OS=Debaryomyces hansenii GN=DBP5 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 7.306e-37
Identity = 98/268 (36.57%), Postives = 151/268 (56.34%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQE--------KRVVI*NQ*SSIKFYCPDELAKVMVIRGKIFGTGKKKGAKNYIFAPQKK 781
            +L LS ELLKGLY  MKF KPSKIQ  +LP++++ P +N+I Q+++G+GKT  F L MLSRVD +    Q +C+ P RELA Q LEV+  M K T ITS+  VP        + +     A V++GTPGT+   +  K +  S++K+ V DEAD+ML+  G  D  +R+ + + +++   Q++LFSATF + V+ +  +      S   ++        K++ +    ++ KF    EL  ++ I   I    K K   N ++A  KK
Sbjct:  107 ELGLSSELLKGLYA-MKFNKPSKIQEKALPLLISNPPKNMIGQSQSGTGKTAAFSLTMLSRVDESDPNTQCICLAPARELARQTLEVITTMSKFTKITSQLIVPD------AMQRGQSTCAHVLVGTPGTLLDLIRRKLINTSKVKVFVLDEADNMLESQGLGDQCVRVKRTLPKAT---QLVLFSATFPDEVRKYAEKFVPNANSLELKQEELNVEGIKQLYMDCDSANHKFEVLSELYGLLTIGSSIIFV-KTKDTANILYAKMKK 363          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.246e-36
Identity = 87/202 (43.07%), Postives = 131/202 (64.85%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGK-HTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKK-LGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601
            +L L P+LL+G+Y  M F +PSKIQ  +LP++L  P +NLIAQ+++G+GKT  FVL MLS+V+P  K PQ LC+ PT ELA+Q  +V+ +MGK +  +    AV  +      + +   ++ Q+VIGTPGT+  W S  K +   ++K+ V DEAD M+   G +D S+RI + + R   +CQ+LLFSATF ++V  F  ++
Sbjct:   96 ELRLKPQLLQGVYA-MGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNK-----LERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPR---NCQMLLFSATFEDSVWKFAQKV 288          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX25_XENLA (ATP-dependent RNA helicase DDX25 OS=Xenopus laevis GN=deadsouth PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.626e-36
Identity = 90/202 (44.55%), Postives = 127/202 (62.87%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW-MSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601
            +L+L  ELL+G+Y  M F +PSKIQ  +LPM+L  P +NLIAQ+++G+GKT  FVL MLSRVD N K PQ +C+ PT ELA+Q  +V+ +MGK   GI    A+  +        K   + AQ+VIGTPGT+  W    + +    + + V DEAD M++  G  D S+R+ + + +S   CQ+LLFSATF ++V  F  RI
Sbjct:  101 ELHLKNELLRGIYA-MGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAMLSRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRP-----GKGSRLEAQIVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKS---CQMLLFSATFEDSVWAFAERI 293          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_NEOFI (ATP-dependent RNA helicase dbp5 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dbp5 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.990e-34
Identity = 89/204 (43.63%), Postives = 125/204 (61.27%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            DL L P +LKGL   M F+KPSKIQ  +LP++L  P +NL+ Q+++G+GKT  FVL  LSRVD +     K PQAL + PTRELA Q L V++ MG+   G+    AVPTD       S+   +   +V+GTPGT+   +  +    ++LK+LV DEAD+MLD+ G  D  +R+   + R     QV+LFSATF E V  + ++
Sbjct:   81 DLGLDPRILKGLS-NMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAVPTDRD-----SRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNMLDQQGLGDQCIRVKALLPRD---IQVVLFSATFPEHVHQYASK 275          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_ASPFU (ATP-dependent RNA helicase dbp5 OS=Aspergillus fumigatus GN=dbp5 PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.990e-34
Identity = 89/204 (43.63%), Postives = 125/204 (61.27%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL----KAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            DL L P +LKGL   M F+KPSKIQ  +LP++L  P +NL+ Q+++G+GKT  FVL  LSRVD +     K PQAL + PTRELA Q L V++ MG+   G+    AVPTD       S+   +   +V+GTPGT+   +  +    ++LK+LV DEAD+MLD+ G  D  +R+   + R     QV+LFSATF E V  + ++
Sbjct:   81 DLGLDPRILKGLS-SMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRVDLSTEQMQKTPQALILAPTRELARQILGVVQVMGQFVDGLIIGAAVPTDRD-----SRPKRLECSIVVGTPGTVGDMIKRRTFIPNKLKVLVLDEADNMLDQQGLGDQCIRVKALLPRD---IQVVLFSATFPEHVHQYASK 275          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_SCLS1 (ATP-dependent RNA helicase dbp5 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=dbp5 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.561e-34
Identity = 93/247 (37.65%), Postives = 142/247 (57.49%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI*NQ*SSIK---FYCPDELAKVMVIRGKIFG 730
            L +   +LKGLY  M F+KPSKIQ  +LP++L  P  N+IAQ+++G+GKT  FV+ +LSR+D      PQALC+ P+RELA Q   V+R +G+   G++ + A+P        + +   V A V++GTPGT+   +  K +  S++K+L  DEAD+MLD+ G  D  LR+   I+      Q+LLFSATF + V  F  +   R      +   + +    S IK     CP+E+ K  ++  K++G
Sbjct:   74 LGIDASILKGLYA-MNFKKPSKIQEKALPLLLGNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVVRSIGQFVEGLSVQAAIPG------AVERNARVNAMVIVGTPGTVMDLIKRKSIDASQMKVLCLDEADNMLDQQGLGDQCLRVKSMIKVE----QILLFSATFPDEVYGFAQQFSPRANEIKLKRDELTV----SGIKQMFMDCPNEVGKYEIL-VKLYG 304          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_CRYNE (ATP-dependent RNA helicase DBP5 OS=Cryptococcus neoformans GN=DBP5 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.561e-34
Identity = 83/218 (38.07%), Postives = 133/218 (61.01%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWM--SAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI 649
            +LNL  +L+KG+ +   FQKPSKIQ  +LP++L+ P RNLI Q+++G+GKT  F L MLSRVDP +  PQA+CI P+RELA Q  EV+ ++G+ T + +  A+P         S+   +  Q++IGTPGT+   +   ++ L    +++LV DEAD ++ + G  + + RI + +     + Q +LFSATFN+ V+ F  R        F +++ + +
Sbjct:  152 ELNLHEDLMKGI-IAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNMLSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGS------WSRNSRIDKQILIGTPGTLVDMLMRGSRILDPRMIRVLVLDEADELIAQQGLGEQTFRIKQLL---PPNVQNVLFSATFNDDVQEFADRFAPEANKIFLRKEDITV 359          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_BOTFB (ATP-dependent RNA helicase dbp5 OS=Botryotinia fuckeliana (strain B05.10) GN=dbp5 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.561e-34
Identity = 94/247 (38.06%), Postives = 140/247 (56.68%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRIC*RL*STFCQEKRVVI*NQ*SSIK---FYCPDELAKVMVIRGKIFG 730
            L +   +LKGLY  M F+KPSKIQ  +LP++L  P  N+IAQ+++G+GKT  FV+ +LSR+D      PQALC+ P+RELA Q   V+R +G+   G+T + A+P        + +   V A VV+GTPGT+   +  + +  S++KIL  DEAD+MLD+ G  D  +R+   I       Q+LLFSATF + V  F      R      +   + +    S IK     CP+E+ K  ++  K++G
Sbjct:   74 LGIDASILKGLYA-MNFKKPSKIQEKALPLLLRNPPTNMIAQSQSGTGKTAAFVITILSRLDFSKPTTPQALCLAPSRELARQIEGVIRSIGQFVDGLTVQAAIPG------AVERNAKVNAMVVVGTPGTVMDLIKRRSIDASQMKILCLDEADNMLDQQGLGDQCMRVKSMIRVE----QILLFSATFPDEVYGFAQDFSPRANEIKLKRDELTV----SGIKQMFMDCPNEVGKYEIL-VKLYG 304          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_MAGGR (ATP-dependent RNA helicase DBP5 OS=Magnaporthe grisea GN=DBP5 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.200e-33
Identity = 85/201 (42.29%), Postives = 130/201 (64.68%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNL-KAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            +L L   ++ GL + M F+KPSKIQA +LP++L+ P RN+IAQ+++G+GKT  FV+ +LSRVD N    PQAL + P+RELA Q   V++ +G+  TG+  + A+P        IS+   V A VV+GTPGT+   +  ++   S+LK+LV DEAD+MLD+ G  +  +R+   + ++    Q LLFSATF + VK++  +
Sbjct:  100 ELGLPQGIIDGL-LAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTILSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPG------AISRETGVKANVVVGTPGTVMDLIRRRQFDVSQLKLLVVDEADNMLDQQGLGEQCVRVKNMLPKT---IQTLLFSATFPDHVKSYAEK 290          
The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DD19A_BOVIN3.280e-3743.56ATP-dependent RNA helicase DDX19A OS=Bos taurus GN... [more]
DBP5_DEBHA7.306e-3736.57ATP-dependent RNA helicase DBP5 OS=Debaryomyces ha... [more]
DD19B_HUMAN1.246e-3643.07ATP-dependent RNA helicase DDX19B OS=Homo sapiens ... [more]
DDX25_XENLA3.626e-3644.55ATP-dependent RNA helicase DDX25 OS=Xenopus laevis... [more]
DBP5_NEOFI1.990e-3443.63ATP-dependent RNA helicase dbp5 OS=Neosartorya fis... [more]
DBP5_ASPFU1.990e-3443.63ATP-dependent RNA helicase dbp5 OS=Aspergillus fum... [more]
DBP5_SCLS17.561e-3437.65ATP-dependent RNA helicase dbp5 OS=Sclerotinia scl... [more]
DBP5_CRYNE7.561e-3438.07ATP-dependent RNA helicase DBP5 OS=Cryptococcus ne... [more]
DBP5_BOTFB7.561e-3438.06ATP-dependent RNA helicase dbp5 OS=Botryotinia fuc... [more]
DBP5_MAGGR2.200e-3342.29ATP-dependent RNA helicase DBP5 OS=Magnaporthe gri... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bp
AGATTTGAATCTCTCACCAGAGCTCCTAAAGGGATTATACGTGGAAATGA
AATTCCAGAAGCCTAGCAAGATTCAAGCCATCAGTTTGCCTATGATCTTG
ACTCCTCCCTACAGAAATTTGATTGCTCAGGCACGTAATGGTTCTGGCAA
GACGACTTGTTTTGTGCTTGGGATGTTGAGCCGTGTTGATCCAAACCTCA
AGGCTCCACAAGCACTTTGCATTTGTCCTACCAGAGAATTGGCAATTCAG
AATTTGGAGGTTCTTCGTAAGATGGGGAAGCACACAGGGATAACTTCAGA
ATGTGCTGTGCCAACAGACAGCACCAATTATGTGCCAATATCAAAAAGGC
CACCAGTTACAGCACAAGTAGTGATTGGCACTCCTGGTACCATTAAGAAA
TGGATGTCAGCAAAGAAATTGGGTTTCAGTCGTTTGAAAATTCTTGTGTA
TGATGAGGCCGATCACATGCTTGATGAGGCTGGCTTTAGAGATGATTCTT
TGAGGATTATGAAGGACATTGAAAGAAGCAGTGGTCATTGCCAGGTTCTT
CTATTTTCAGCCACATTCAACGAAACTGTCAAGAATTTTGTAACAAGGAT
TTGTTAAAGATTATAATCAACTTTTTGTCAAGAAAAAAGAGTTGTCATTT
AAAATCAGTAAAGCAGTATAAAGTTTTACTGTCCCGACGAACTTGCCAAG
GTTATGGTAATCAGGGGAAAAATTTTTGGAACTGGGAAAAAAAAAGGGGC
AAAAAATTATATTTTTGCCCCACAAAAAAAATTGGAAAGCGCCTTGCCAA
AAACCCTTTAAAAAATTTGGGTTAAAAAAGCCCCAAAAATTTAGGGGGGG
CCAAAA
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