EY680240

Overview
NameEY680240
Unique NameEY680240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_NEUCR (ATP-dependent RNA helicase dbp-5 OS=Neurospora crassa GN=dbp-5 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.022e-30
Identity = 79/196 (40.31%), Postives = 119/196 (60.71%), Query Frame = 2
Query:   17 PELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD-PNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            PE +    + + F+KPSK+Q   LP++L+ P RN+IAQ+++G+GKT  FVL +LSR+D      PQAL + P+RELA Q   V++ +G+    +  E A+P        IS+   V   VV+GTPGT+   +  ++   S+LK+LV DEAD+MLD+ G  D  +R+   + ++    Q+LLFSATF + V  F  R
Sbjct:   82 PEAVNRGLLAINFKKPSKVQEKCLPLMLSDPPRNMIAQSQSGTGKTAAFVLTVLSRIDLSKPHQPQALLLAPSRELARQIQTVVQTIGQFCENLIVEAAIPG------AISRETGVRGSVVVGTPGTVMDLVKRRQFDISQLKVLVIDEADNMLDQQGLGDQCVRVKNMLPKT---IQILLFSATFPDKVLRFAER 268          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DDX19_DROME (DEAD-box helicase Dbp80 OS=Drosophila melanogaster GN=Dbp80 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.743e-30
Identity = 81/201 (40.30%), Postives = 115/201 (57.21%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKH-TGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKW-MSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTRI 601
            L+L   LLKG+Y  M F  PSKIQ  +LP +L  P +N+IAQ+++G+GKT  FVL MLSRV+  L  PQ LC+ PT ELAIQ  EV  +MG+    I    AV  +      + +   +   ++IGTPG +  W +  +     ++ + V DEAD M+   G  D  +RI K +   + HCQ+L FSAT+ + V +F   I
Sbjct:   78 LHLKASLLKGIYA-MGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEE-----VDRSKKIEEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKML---NPHCQMLFFSATYGKEVMDFARLI 269          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DBP5_COCIM (ATP-dependent RNA helicase DBP5 OS=Coccidioides immitis GN=DBP5 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.287e-29
Identity = 77/200 (38.50%), Postives = 123/200 (61.50%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVD---PNLKAPQALCICPTRELAIQNLEVLRKMGKHT-GITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            +L L+  +  GL  +M F++PSKIQ  +LP+++  P  N+IAQ+++G+GKT  FVL +LSR++      K+PQAL + P+RELA Q + V++ MG    G+    AVP +      +++   V A +V+GTPGT++  +  +      L++LV DEAD+MLD+ G  D  +R+   + R+    QV+LFSATF + V  +
Sbjct:   96 ELGLAEPIQMGLS-KMNFRRPSKIQERALPLLMANPPTNMIAQSQSGTGKTAAFVLNILSRLELTPEKQKSPQALVLAPSRELARQIVGVIQAMGTFVEGLFVATAVPME------MNRNQRVEASIVVGTPGTVQDLIKKRLFNTQHLRVLVLDEADNMLDQQGLGDQCIRVKSLLPRT---IQVVLFSATFPDFVVRY 285          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G++ E  F+KPS IQ  ++P+ +T   R+++A+A+NG+GKT  FV+  L +V P L   QAL + PTRELA+Q  +V+R +GKH GI+  C V T  TN      R   T  +++GTPG +    S K    S   + + DEAD ML     RD    I + +       Q LLFSATF  TVK F+ +
Sbjct:   50 DFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLS----RDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVK 239          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.634e-28
Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G++ E  F+KPS IQ  ++P+ +T   R+++A+A+NG+GKT  FV+  L +V P L   QAL + PTRELA+Q  +V+R +GKH GI+  C V T  TN      R   T  +++GTPG +    S K    S   + + DEAD ML     RD    I + +       Q LLFSATF  TVK F+ +
Sbjct:   50 DFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLS----RDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVK 239          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.747e-28
Identity = 80/199 (40.20%), Postives = 112/199 (56.28%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G++ E  F+KPS IQ  ++P+ +T   R+++A+A+NG+GKT  FV+  L ++ P L   QAL + PTRELA+Q  +V+R +G+H G++  C V T  TN      R   T  V++GTPG +    S K    S   + V DEAD ML     RD    I + +       Q LLFSATF  TVK F+ +
Sbjct:   35 DFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAITG--RDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHCGVS--CMVTTGGTNLRDDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLS----RDFKTIIEQVLTFLPKAHQSLLFSATFPLTVKEFMVK 224          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.804e-27
Identity = 79/199 (39.70%), Postives = 113/199 (56.78%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D NL  ELL G++ E  F+KPS IQ  S+PM L    R+++A+A+NG+GKT  F++  L  V P L   QAL + PTRELA+Q  +V+R +GKH G  ++C V T  T+      R      +++GTPG +    + K +  S   + V DEAD ML     R+    I + +E    + Q LLFSATF   VK+F+ +
Sbjct:   34 DFNLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVG--TQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLS----REFKGIIEQILEFFPPNRQALLFSATFPLAVKSFMDK 223          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_PICST (ATP-dependent RNA helicase DHH1 OS=Pichia stipitis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.854e-27
Identity = 79/199 (39.70%), Postives = 112/199 (56.28%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D NL  ELL G++ E  F+KPS IQ  S+PM L    R+++A+A+NG+GKT  F++  L ++ P L   QAL + PTRELA+Q  +V+R +GKH GI  +C V T  T+      R      V++GTPG +    +      S   + V DEAD ML     R+    I + +E    + Q LLFSATF   VK+F+ +
Sbjct:   34 DFNLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDVLARAKNGTGKTASFIIPSLQQIKPKLNKIQALILVPTRELALQTSQVVRTLGKHLGI--QCMVTTGGTSLKDDILRLNDPVHVLVGTPGRVLDLAARSVADLSECPLFVMDEADKMLS----REFKGIIEQILEFFPKNRQSLLFSATFPLAVKSFMDK 223          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.169e-26
Identity = 76/199 (38.19%), Postives = 111/199 (55.78%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G++ E  F+KPS IQ  ++P+ +    ++++A+A+NG+GKT  FV+  L +V P L   QAL + PTRELA+Q  +V+R +GKH GI+  C V T  TN      R      +++GTPG +    S +    S   + + DEAD ML     RD  +   + +       Q+LLFSATF  TVK F+ +
Sbjct:   40 DFYLKRELLMGIF-EAGFEKPSPIQEEAIPVAIAG--KDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKMLS----RDFKVLAEQILGFLPERRQLLLFSATFPVTVKEFMVK 229          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.527e-26
Identity = 79/199 (39.70%), Postives = 110/199 (55.28%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G++ E  F++PS IQ  ++P+ L    R+++A+A+NG+GKT  FV+  L  V P +   QAL + PTRELA+Q  +V+R +GKH GI+  C V T  TN      R      V++GTPG +    S K    S   + V DEAD ML     RD    + + +     + Q LLFSATF  TVK F+ +
Sbjct:   33 DFYLRRELLMGIF-EAGFERPSPIQEEAIPIALAR--RDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKMLS----RDFKSLVEQILSFLPQNHQSLLFSATFPLTVKEFMVK 222          
The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DBP5_NEUCR1.022e-3040.31ATP-dependent RNA helicase dbp-5 OS=Neurospora cra... [more]
DDX19_DROME1.743e-3040.30DEAD-box helicase Dbp80 OS=Drosophila melanogaster... [more]
DBP5_COCIM3.287e-2938.50ATP-dependent RNA helicase DBP5 OS=Coccidioides im... [more]
DHH1_YEAST3.634e-2840.70ATP-dependent RNA helicase DHH1 OS=Saccharomyces c... [more]
DHH1_YEAS73.634e-2840.70ATP-dependent RNA helicase DHH1 OS=Saccharomyces c... [more]
DHH1_CANGA4.747e-2840.20ATP-dependent RNA helicase DHH1 OS=Candida glabrat... [more]
DHH1_CANAL1.804e-2739.70ATP-dependent RNA helicase DHH1 OS=Candida albican... [more]
DHH1_PICST6.854e-2739.70ATP-dependent RNA helicase DHH1 OS=Pichia stipitis... [more]
DHH1_KLULA1.169e-2638.19ATP-dependent RNA helicase DHH1 OS=Kluyveromyces l... [more]
DHH1_ASHGO1.527e-2639.70ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bp
AGATTTGAATCTCTCACCAGAGCTCCTAAAGGGATTATACGTGGAAATGA
AATTCCAGAAGCCTAGCAAGATTCAAGCCATCAGTTTGCCTATGATCTTG
ACTCCTCCCTACAGAAATTTGATTGCTCAGGCACGTAATGGTTCTGGCAA
GACGACTTGTTTTGTGCTTGGGATGTTGAGCCGTGTTGATCCAAACCTCA
AGGCTCCACAAGCACTTTGCATTTGTCCTACCAGAGAATTGGCAATTCAG
AATTTGGAGGTTCTTCGTAAGATGGGGAAGCACACAGGGATAACTTCAGA
ATGTGCTGTGCCAACAGACAGCACCAATTATGTGCCAATATCAAAAAGGC
CACCAGTTACAGCACAAGTAGTGATTGGCACTCCTGGTACCATTAAGAAA
TGGATGTCAGCAAAGAAATTGGGTTTCAGTCGTTTGAAAATTCTTGTGTA
TGATGAGGCCGATCACATGCTTGATGAGGCTGGCTTTAGAGATGATTCTT
TGAGGATTATGAAGGACATTGAAAGAAGCAGTGGTCATTGCCAGGTTCTT
CTATTTTCAGCCACATTCAACGAAACTGTCAAGAATTTTGTAACAAGGAT
TTGTTAAAGATTATAATCAACTTTTTGTCAAGAAAAAAGAGTTGTCATTT
AAAATCAGTAAAGCAGTATAAAGTTTTACTGTCCCGACGAACTTGCCAAG
GTTATGGTAATCAGGGGAAAAATTTTTGGAACTGGGAAAAAAAAAGGGGC
AAAAAATTATATTTTTGCCCCACAAAAAAAATTGGAAAGCGCCTTGCCAA
AAACCCTTTAAAAAATTTGGGTTAAAAAAGCCCCAAAAATTTAGGGGGGG
CCAAAA
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