EY680240

Overview
NameEY680240
Unique NameEY680240
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length856
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.802e-26
Identity = 79/197 (40.10%), Postives = 109/197 (55.33%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFV 592
            D  L  ELL G++ E  F+KPS IQ  S+P+ L    R+++A+A+NG+GKT  FV+  L +V       QAL + PTRELA+Q  +V+R +GKH GI+  C V T  TN      R   T  +++GTPG +    S K    S   + + DEAD ML     RD    I + +     + Q LLFSATF  +VK F+
Sbjct:   38 DFYLKRELLMGIF-EAGFEKPSPIQEESIPVALAG--RDILARAKNGTGKTAAFVIPTLEKVKSKHNKIQALIMVPTRELALQTSQVVRTLGKHCGIS--CMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSECNLFIMDEADKMLS----RDFKSIIEQILVFLPKNHQSLLFSATFPLSVKEFM 225          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.761e-25
Identity = 77/199 (38.69%), Postives = 107/199 (53.77%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDE--AGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFV 592
            D  L  ELL G++ E  F+KPS +Q  S+PM L    R+++A+A+NG+GKT  FV+  L +  P +   QAL + PTRELA+Q  +V+R +GKH G+  +C V T  T+      R      V++GTPG +    S K    S   + V DEAD ML     G  +  L       +S      LLFSATF   VK+F+
Sbjct:   34 DFPLKRELLMGIF-EAGFEKPSPVQEESIPMALAG--RDILARAKNGTGKTASFVIPCLQQARPKVNKIQALILVPTRELALQTSQVVRTLGKHLGL--QCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRKVADLSECPLFVMDEADKMLSREFKGIIEQILAFFPTTRQS------LLFSATFPLAVKSFM 221          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.210e-23
Identity = 70/196 (35.71%), Postives = 108/196 (55.10%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D ++  ELL G++ EM ++KPS IQ  ++P+ LT   R+++A+A+NG+GKT  FV+  L R++P     Q L + PTRELA+Q  +V + +G+H GI     V T  T       R      +++GTPG I           S   + V DEAD +L      + ++ I + ++      Q++LFSATF  TVK+F
Sbjct:   51 DFSIKRELLMGIF-EMGYEKPSPIQEEAIPVALTG--RDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHLGI--NVMVTTGGTTLRDDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLLSP----EFTIVIEQLLQFHPKDRQIMLFSATFPMTVKDF 237          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23
Identity = 73/198 (36.87%), Postives = 112/198 (56.57%), Query Frame = 2
Query:    5 LNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            ++L PELL+G+Y    F++PS IQ  ++  I+     ++IAQA++G+GKT  F +  L ++DPNLKA QAL + PTRELA Q  +V+  +G    +  EC      TN     K      QVV+GTPG ++  +  + L   ++K+ + DEAD ML   GF +    I + + +S+   QV+L SAT  + V    T+
Sbjct:   30 MDLKPELLRGIYA-YGFERPSAIQQRAIMPIIKGS--DVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSL--ECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEMLSR-GFTEQIYDIFQLLPQST---QVVLLSATMPQDVLEVTTK 218          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_YARLI (ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica GN=DHH1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.580e-23
Identity = 75/199 (37.69%), Postives = 108/199 (54.27%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G++ E  F+ PS IQ  ++P+ L    R+++A+A+NG+GKT  FV+  L +V+P +   QAL + PTRELA+Q  +V + +GKH GI  +  V T  TN      R   T  V++GTPG +           S   + + DEAD +L      D +  I + +       Q+LLFSATF  TVK F+ R
Sbjct:   32 DFFLKRELLMGIF-EAGFENPSPIQEEAIPIALAG--RDILARAKNGTGKTAAFVIPALQQVNPKVNKIQALIMVPTRELALQTSQVCKTLGKHLGI--KVMVTTGGTNLRDDIMRLEDTVHVLVGTPGRVLDLAGKGVADLSESPMFIMDEADKLLSP----DFTPIIEQVLHFFPEDRQILLFSATFPLTVKAFMDR 221          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNV (ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.064e-23
Identity = 75/200 (37.50%), Postives = 108/200 (54.00%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHC----QVLLFSATFNETVKNF 589
            D  L  ELL G+Y    F++PS IQ  ++PM LT   R+++A+A+NG+GKT  F++  L+R++ +L   QAL + PTRELA+Q  +V + +G H     +  + T  T       R      +++GTPG I    S    G ++  I V DEAD +L E          M  IE++   C    QV+LFSATF  TVK F
Sbjct:   40 DFGLRRELLMGIYTA-GFERPSPIQEQAIPMALTG--RDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIP-NLQVMITTGGTTLRDDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGIFVMDEADKLLSE--------DFMPVIEQTLALCPQERQVMLFSATFPWTVKEF 227          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 2.064e-23
Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPIS--KRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            DL L   +L+ L  ++ ++KPS IQA  +P +L    R+++  A+ GSGKT  F L +L+ +DP L+APQ L + PTRELA+Q  E + +  KH    +  A+       V +   ++ P   Q+V+GTPG +   +    L  S+L  LV DEAD ML   GF +D   IM  I    GH Q  LFSAT  E ++    R
Sbjct:   10 DLGLKAPILEAL-TDLGYEKPSPIQAECIPHLLDG--RDVLGMAQTGSGKTAAFSLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGP---QIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML-RMGFIEDVETIMAQI--PEGH-QTALFSATMPEAIRRITRR 200          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana GN=RH8 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.695e-23
Identity = 77/202 (38.12%), Postives = 115/202 (56.93%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLK---ILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            D  L  ELL G+Y E  F++PS IQ  S+P+ LT   R+++A+A+NG+GKT  F + +L ++D +    QA+ I PTRELA+Q  +V +++GKH  I  +  V T  T+      R      +++GTPG I   +   K G   LK   +LV DEAD +L +  F+     ++  +  S    Q+L+FSATF  TVK+F  R
Sbjct:  135 DYFLKRELLMGIY-EKGFERPSPIQEESIPIALTG--RDILARAKNGTGKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKI--QVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRI---LDLTKKGVCVLKDCSVLVMDEADKLLSQE-FQPSVEHLISFLPESR---QILMFSATFPVTVKDFKDR 324          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.520e-23
Identity = 73/199 (36.68%), Postives = 108/199 (54.27%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNFVTR 598
            +  L  ELL G++ E  F+KPS IQ  S+PM L    R+++A+A+NG+GKT  F++  L +V   L   Q L + PTRELA+Q  +V++ +GKH  +  +C V T  T       R      +++GTPG +    +     FS   + V DEAD ML     R+    I + +E    + Q LLFSATF   VK+F+ +
Sbjct:   33 EFGLKRELLMGIF-EAGFEKPSPIQEESIPMALAG--RDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKH--LKLQCMVTTGGTLLRDDVMRLDEPVHILVGTPGRVLDLAARSIADFSECPMFVMDEADKMLS----REFKGIIEQILEFFPKNRQSLLFSATFPLAVKSFMDK 222          
BLAST of EY680240 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.520e-23
Identity = 73/196 (37.24%), Postives = 105/196 (53.57%), Query Frame = 2
Query:    2 DLNLSPELLKGLYVEMKFQKPSKIQAISLPMILTPPYRNLIAQARNGSGKTTCFVLGMLSRVDPNLKAPQALCICPTRELAIQNLEVLRKMGKHTGITSECAVPTDSTNYVPISKRPPVTAQVVIGTPGTIKKWMSAKKLGFSRLKILVYDEADHMLDEAGFRDDSLRIMKDIERSSGHCQVLLFSATFNETVKNF 589
            D  +  EL+ G++ E  F+KPS IQ  ++P+ LT   R+++A+A+NG+GKT  FV+  L R +P +   QAL + PTRELA+Q  +V + +GKH GI     V T  T       R   T  +++GTPG I    S      S     V DEAD +L      + +  I + +       QV+LFSATF   VK+F
Sbjct:   51 DFYIKRELMMGIF-EAGFEKPSPIQEETIPVALTG--RDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHLGI--NVMVTTGGTGLQDDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTFVMDEADKLLSP----EFTPVIEQLLSFHPKDRQVMLFSATFPMIVKSF 237          
The following BLAST results are available for this feature:
BLAST of EY680240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DHH1_VANPO5.802e-2640.10ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma... [more]
DHH1_DEBHA3.761e-2538.69ATP-dependent RNA helicase DHH1 OS=Debaryomyces ha... [more]
DHH1_BOTFB1.210e-2335.71ATP-dependent RNA helicase dhh1 OS=Botryotinia fuc... [more]
IF4A_ASPCL1.580e-2336.87ATP-dependent RNA helicase eIF4A OS=Aspergillus cl... [more]
DHH1_YARLI1.580e-2337.69ATP-dependent RNA helicase DHH1 OS=Yarrowia lipoly... [more]
DHH1_CRYNV2.064e-2337.50ATP-dependent RNA helicase VAD1 OS=Cryptococcus ne... [more]
DEAD_KLEPN2.064e-2337.81Cold-shock DEAD box protein A OS=Klebsiella pneumo... [more]
RH8_ARATH2.695e-2338.12DEAD-box ATP-dependent RNA helicase 8 OS=Arabidops... [more]
DHH1_PICGU3.520e-2336.68ATP-dependent RNA helicase DHH1 OS=Pichia guillier... [more]
DHH1_COCIM3.520e-2337.24ATP-dependent RNA helicase DHH1 OS=Coccidioides im... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-650-008-H09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY680240 ID=EY680240; Name=EY680240; organism=Citrus sinensis; type=EST; length=856bp
AGATTTGAATCTCTCACCAGAGCTCCTAAAGGGATTATACGTGGAAATGA
AATTCCAGAAGCCTAGCAAGATTCAAGCCATCAGTTTGCCTATGATCTTG
ACTCCTCCCTACAGAAATTTGATTGCTCAGGCACGTAATGGTTCTGGCAA
GACGACTTGTTTTGTGCTTGGGATGTTGAGCCGTGTTGATCCAAACCTCA
AGGCTCCACAAGCACTTTGCATTTGTCCTACCAGAGAATTGGCAATTCAG
AATTTGGAGGTTCTTCGTAAGATGGGGAAGCACACAGGGATAACTTCAGA
ATGTGCTGTGCCAACAGACAGCACCAATTATGTGCCAATATCAAAAAGGC
CACCAGTTACAGCACAAGTAGTGATTGGCACTCCTGGTACCATTAAGAAA
TGGATGTCAGCAAAGAAATTGGGTTTCAGTCGTTTGAAAATTCTTGTGTA
TGATGAGGCCGATCACATGCTTGATGAGGCTGGCTTTAGAGATGATTCTT
TGAGGATTATGAAGGACATTGAAAGAAGCAGTGGTCATTGCCAGGTTCTT
CTATTTTCAGCCACATTCAACGAAACTGTCAAGAATTTTGTAACAAGGAT
TTGTTAAAGATTATAATCAACTTTTTGTCAAGAAAAAAGAGTTGTCATTT
AAAATCAGTAAAGCAGTATAAAGTTTTACTGTCCCGACGAACTTGCCAAG
GTTATGGTAATCAGGGGAAAAATTTTTGGAACTGGGAAAAAAAAAGGGGC
AAAAAATTATATTTTTGCCCCACAAAAAAAATTGGAAAGCGCCTTGCCAA
AAACCCTTTAAAAAATTTGGGTTAAAAAAGCCCCAAAAATTTAGGGGGGG
CCAAAA
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