CX671594

Overview
NameCX671594
Unique NameCX671594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5072 contig Csv1_Contig5072:1..886. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.489e-80
Identity = 151/251 (60.16%), Postives = 177/251 (70.52%), Query Frame = -1
Query:   50 ASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFA-FKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 799
            A   G    LT+DEIQ  TY++VKG+G AN CP ++ G  +    K G Y+ + FC+EPTSFTVK E   K    +F  TKLMTRLTYTLD + G F+V  DG+ +  E DGIDYAA TVQL GGERV FLFTIKQ    G  +   G+FLVPSYRGSSFLDPKGRGGSTGYDNA+ALPA  R D E+L KEN+K T +  G    SV K  P TGE+ GVFESIQPSDTDLGAK PKD+K+ G+WYAQL+
Sbjct:   43 AMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 2.378e-78
Identity = 146/241 (60.58%), Postives = 175/241 (72.61%), Query Frame = -1
Query:   53 LTYDEIQSKTYMEVKGTGTANQCPTIDGGVDS-FAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQL 772
            LTYDE+QS +Y+EVK +G A  CP +  GV S  + K GKY+   +CLEP+SF VK     K    +F+ TKLMTRLTYTLD I     V  DG+    EKDG+DYAA TVQLAGGERVPFLFTIK L+A G    F G+F VPSYRG++FLDPKGRGG++GYD A+ALPA   GD+E+ AKEN K+T++S G I   V K   ETGE+ GVFESIQPSDTDLGAKVPKD+K  G+WYAQ+
Sbjct:   96 LTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPAS--GDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQI 334          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 4.075e-62
Identity = 125/244 (51.23%), Postives = 164/244 (67.21%), Query Frame = -1
Query:   50 TYMEVKGTGTANQCP----TIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 745
            TY +++GTG AN+CP    T  G +   + K   Y  K+ CLEPT+F VK E  NK    +F   KL+TR T T+D++ G  + + D ++ FVEKDG+D+ A+TVQL GGERVPFLFTIK LVA  +P         +F G F VPSYRG++FLDPKGRG  +GYDNA+ALPA  + D+EDL + N+K      GKI+L + K    +GE+ G FES QPSDTDLGA  PK+VKI+GI+YA++E
Sbjct:   34 TYEQIRGTGLANKCPQLTETSRGSIPLDSSK--SYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADEPKEVKIRGIFYARVE 273          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.236e-60
Identity = 132/273 (48.35%), Postives = 178/273 (65.20%), Query Frame = -1
Query:   50 TLLNNCL--FPQGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 832
            TLL  CL  F   A A    + LTYD+I         GTG AN+CPT+D     ++     + Y+  + CL+PT+F VK E  NK    +F  TKL+TR T +LD+I+G  +V+ DG++ FVE+DGID+  VTVQ+AGGER+P LFT+K LVAS +P         +F GEF VPSYR ++FLDPKGRG ++GYD+AIALP   +  EE+LA+ N+K  S + G+I+L+V K    TGE+ G FES Q SD D+GA  P +VKIQG++YA +E
Sbjct:    9 TLLAVCLGIFSLSAPAFAAKQTLTYDDIV--------GTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.236e-60
Identity = 132/273 (48.35%), Postives = 178/273 (65.20%), Query Frame = -1
Query:   50 TLLNNCL--FPQGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 832
            TLL  CL  F   A A    + LTYD+I         GTG AN+CPT+D     ++     + Y+  + CL+PT+F VK E  NK    +F  TKL+TR T +LD+I+G  +V+ DG++ FVE+DGID+  VTVQ+AGGER+P LFT+K LVAS +P         +F GEF VPSYR ++FLDPKGRG ++GYD+AIALP   +  EE+LA+ N+K  S + G+I+L+V K    TGE+ G FES Q SD D+GA  P +VKIQG++YA +E
Sbjct:    9 TLLAVCLGIFSLSAPAFAAKQTLTYDDIV--------GTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKIQGVFYASIE 270          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.155e-57
Identity = 124/244 (50.82%), Postives = 156/244 (63.93%), Query Frame = -1
Query:   53 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPE--------NFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQL 754
            Q  TY E+  TG AN+CP I      S   +PG+ Y     CLEP  + VK E VNK    ++   KL+TR T +L++I G   V  DG + F E+ GID+  VTVQL GGE+VPF FTIK LV   +P         +F G+F VPSYRG++FLDPKGRG +TGYDNA+ALPA    D+ED A  N+K T    G I+L VTK    TGE+ GVF+S QPSDTDLGAK P +VKI+GI+YA++
Sbjct:   32 QDLTYDEILNTGLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPVEVKIRGIFYARV 271          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.823e-52
Identity = 113/250 (45.20%), Postives = 156/250 (62.40%), Query Frame = -1
Query:   50 TYDEIQSKTYMEVKGTGTANQCPTI-DGGVDSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVAS--------GKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 769
            T  ++ + TY ++K TG AN+C ++ +    +   + GK Y     CLEP  F VK E  NK    +F   K++TR T +LD++ G   +  DGT+ F EK GID+ A+TV L GGE VPFLFT+K LVAS            +  G + VPSYR S+FLDPK RG +TGY++A+A+P+   GD EDL KEN+K   +  G+I+L+V+K    TGEV GVF +IQPSDTD+G K   DVK+ G +Y ++E
Sbjct:   26 TAADLGTLTYDQIKDTGLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSA--GDAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKLVGQFYGRIE 273          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.993e-52
Identity = 121/277 (43.68%), Postives = 160/277 (57.76%), Query Frame = -1
Query:   50 LTLLNNCL----FPQGASAEGVPK-RLTYDEIQSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPG-KYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKP--------ENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGIWYAQLE 835
            + LL+ C     F    SA  V K +LTYD+I +        TG AN CP I      +   +P  KY    FC+EP  + VK E VNK    ++   K++TR T +L++I G   V  DGT+ F EKDGID+  +TV L GGE VPF FT+K    + +P         +F G+F VPSYRG+ FLDPK RG  TGYDNA+ALP+       D  + N K T    G ++L VT+    TGE+ G+FES QPSDTDLGAK P DVK++GI+Y +++
Sbjct:    8 VALLSVCFGLLTFLYSGSAFAVDKSQLTYDDIVN--------TGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPLDVKVRGIFYGRVD 271          
BLAST of CX671594 vs. ExPASy Swiss-Prot
Match: PSBO_POPEU (Oxygen-evolving enhancer protein 1, chloroplastic (Fragments) OS=Populus euphratica GN=PSBO PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.372e-30
Identity = 83/174 (47.70%), Postives = 88/174 (50.57%), Query Frame = -1
Query:   89 KAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFLFTIKQLVASGKPENFGGEFLVPSYRGSSFLDPKGRGGSTGYDNAIALPAGGRGDEEDLAKENIKNTSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGAKVPK 610
            KAEG+NKN+PPDFQ TKLMTR                         DGIDYAAVTVQL GGERVPFLFTIK                               GGSTGYDNA+ALPAGGR                           SKPETGE+IGVFES+QPSDTDLGAK PK
Sbjct:   10 KAEGINKNSPPDFQKTKLMTR-------------------------DGIDYAAVTVQLPGGERVPFLFTIK-------------------------------GGSTGYDNAVALPAGGR---------------------------SKPETGEIIGVFESLQPSDTDLGAKTPK 100          
The following BLAST results are available for this feature:
BLAST of CX671594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PSBO_CHLRE1.489e-8060.16Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR2.378e-7860.58Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_ANASP4.075e-6251.23Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_THEEB2.236e-6048.35Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_SYNEN2.236e-6048.35Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_CYAA55.155e-5750.82Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_SYNE73.823e-5245.20Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_SYNY34.993e-5243.68Photosystem II manganese-stabilizing polypeptide O... [more]
PSBO_POPEU5.372e-3047.70Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A08-B16-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671594 ID=CX671594; Name=CX671594; organism=Citrus sinensis; type=EST; length=886bp
TTTTTTTCTGAATAGGAATAAGTACACTCATACAAGAAAAGCTCTATTGC
TCAAGCTGTGCATACCAGATACCCTGGATCTTAACATCCTTTGGAACCTT
GGCTCCCAAATCAGTATCAGATGGCTGAATGCTCTCAAACACTCCAATAA
CCTCTCCGGTCTCAGGCTTGCTCTTGGTAACGCTGAGGGTGATCTTCCCT
GTTGAAGATGAAGTATTCTTGATATTCTCCTTGGCGAGATCTTCCTCGTC
CCCTCTTCCACCGGCAGGCAATGCAATAGCATTGTCATAACCAGTTGAAC
CACCCCTTCCCTTTGGGTCCAAGAAGGATGATCCACGGTAAGATGGTACC
AGGAATTCTCCTCCGAAATTCTCAGGTTTGCCTGATGCTACCAATTGTTT
GATGGTGAAAAGGAAGGGCACACGCTCGCCTCCAGCCAGCTGAACTGTCA
CAGCAGCATAGTCAATTCCATCCTTCTCCACAAACTTAATGGTGCCATCG
GGGGACACTTCAAAAGGTCCCTCAATCTCGTCAAGGGTGTAGGTAAGGCG
GGTCATGAGCTTGGTGTTCTGGAAATCTGGTGGGGCATTCTTGTTGACAC
CCTCAGCCTTGACAGTGAAGGAAGTTGGTTCTAGGCAGAACTTCTTAGCC
TGGTATTTGCCAGGTTTGAAGGCAAAAGAGTCAACTCCGCCATCAATGGT
TGGGCACTGGTTAGCAGTTCCGGTTCCCTTCACTTCCATGTATGTCTTGC
TCTGGATTTCATCATAGGTTAGCCTCTTTGGAACACCTTCAGCACTTGCT
CCCTGAGGAAACAAGCAATTATTCAACAATGTCAGATCATAAAGTCCTTT
CCCAACAACATTTTCACTATCTTAAAACTAATTCTT
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