CX671587

Overview
NameCX671587
Unique NameCX671587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.641e-45
Identity = 83/144 (57.64%), Postives = 109/144 (75.69%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F  ++  TW+  H +Q+ GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y++LWN + IVF+VD++PIRV+KN
Sbjct:   34 FGRNYVPTWAFDHQKQLNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKN 176          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.799e-45
Identity = 84/144 (58.33%), Postives = 106/144 (73.61%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F  ++  TW+  H++   GG  IQL LD+ +G GF +K  YLFG  SM IK+VPGDSAGTVTAF ++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVF VD++PIRV+KN
Sbjct:   32 FGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKN 174          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.236e-45
Identity = 83/144 (57.64%), Postives = 107/144 (74.31%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F  ++  TW+  H +Q  GG  +QL+LD+ +G GF SK  YLFG  SM IKL  GD+AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y+ILWN + IVF+VD++PIR +KN
Sbjct:   35 FGRNYVPTWAFDHQKQFNGGSELQLILDKYTGTGFQSKGSYLFGHFSMHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKN 177          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.814e-44
Identity = 79/146 (54.11%), Postives = 107/146 (73.29%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            + F ++F +TW D   +   GG  + L LDQ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  N+H Y+I+W   HI+F VD++PIRV+ N
Sbjct:   26 SNFFDEFDLTWGDHRGKIFNGGNMLSLSLDQVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNN 170          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.370e-44
Identity = 79/145 (54.48%), Postives = 106/145 (73.10%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F + F +TW        E G+ +   LD+ SG GF SK++YLFG++ MKIKLVPG+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP A++H YT+LWN  +I+F VD +PIRV+KN
Sbjct:   26 SFYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKN 169          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.095e-44
Identity = 82/144 (56.94%), Postives = 107/144 (74.31%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F +DF VTWS  H+     GR+  L LDQ SG  F+S + +LFG++ MKIKL+ G S GTV A+YM+S+  N RDE+DFEFLGN  GQPY +QTN+YA G  +RE+R++LWFDPA ++H Y+ILWN H IVF VD +PIR+Y+N
Sbjct:   37 FNKDFFVTWSPTHVNTSNDGRSRTLKLDQESGASFSSIQTFLFGQIDMKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRN 179          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.005e-44
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F E F +TW +      E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S      DE+DFEFLGNRTG PYT+ TN++  GKGDRE +  LWFDP A++H YT+ WN  +I+F VD +PIRV+KN
Sbjct:   30 FYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKG-TAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKN 172          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.536e-43
Identity = 81/146 (55.48%), Postives = 103/146 (70.55%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            A F  D ++TW D   +    G  + L LD++SG GF SK +YLFG+VSM++KLVPG+SAGTVT  Y+ S      DE+DFEFLGN +G+PYT+ TN+Y  GKGD+EQ+  LWFDP AN+H YTILWN   I+F VD  PIR +KN
Sbjct:   21 ANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKS-PGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKN 165          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 2.620e-43
Identity = 77/145 (53.10%), Postives = 108/145 (74.48%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F E+F +TW +   +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKG+REQ+  LWFDP  N+H Y+++W   HI+F VD+VPIRV+ N
Sbjct:   26 SFNEEFDLTWGEHRGKIFSGGKMLSLSLDRVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSEGPT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNN 169          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 2.620e-43
Identity = 77/145 (53.10%), Postives = 108/145 (74.48%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F ++F +TW +     +E G+ +   LD+ SG GF SK++YLFG++ MK+KLV G+SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP A++H YT+LWN  +I+F VD +PIRV+KN
Sbjct:   25 SFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKN 168          
The following BLAST results are available for this feature:
BLAST of CX671587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH_BRAOB1.641e-4557.64Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTHB_PHAAN2.799e-4558.33Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH6.236e-4557.64Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH15_ARATH1.814e-4454.11Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH2.370e-4454.48Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH3.095e-4456.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH9.005e-4454.17Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH1.536e-4355.48Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH16_ARATH2.620e-4353.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH13_ARATH2.620e-4353.10Putative xyloglucan endotransglucosylase/hydrolase... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_12A02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A02-B4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671587 ID=CX671587; Name=CX671587; organism=Citrus sinensis; type=EST; length=582bp
AATTAAAGTTCTCTTTCTAATTAGTAACAGATAATATTTTATTGTACGGC
TTGTTTTACAGCTATGGCTATCCTAAGAAATGCAATAGCATTATTTGTGT
TGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGGGCGACCGGCTACT
TTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCCATCTCAGGCAAAT
CGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAATTCAGGATGTG
GGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATC
AAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAA
TTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAA
ACCGAACGGGTCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGA
AAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAAA
TTATCACCTTTACACTATTCTCTGGAACCATCACCATATTGTCTTCTATG
TGGATGATGTGCCCATCAGGGTTTACAAAAAC
back to top