CX671587

Overview
NameCX671587
Unique NameCX671587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 4.469e-43
Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F +D  +TW D     +  G  + L LDQ+SG GF SK +YL+G+V M+IKLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PY V TN+Y  GKGDREQ+  LWFDP A +H Y+ILWN  HIVFY+D  PIR +KN
Sbjct:   28 FNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTW-DEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKN 170          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 5.837e-43
Identity = 79/146 (54.11%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            A F  D  V W +   + +  G+ + L LD++SG GF SK +YLFG++ M+IKLVPG+SAGTVT FY+ S   +  DE+DFEFLGN +G PYT+ TN+Y  GKGD+EQ+ +LWFDP AN+H Y+ILWN   I+  VDD PIR +KN
Sbjct:   22 ADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEG-STWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKN 166          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 9.956e-43
Identity = 77/145 (53.10%), Postives = 105/145 (72.41%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F +DF +TW     +   GG+ + L LD+ SG GF SK++YLFGR+ M++KLV G+SAGTVTA+Y++S      DE+DFEFLGN +G PY + TNI+  GKG+REQ+  LWFDP  N+H Y+I+W   HI+F VD+ PIRV+KN
Sbjct:   31 SFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPT-HDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKN 174          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.218e-42
Identity = 84/146 (57.53%), Postives = 106/146 (72.60%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            A F E ++ +W+  H   +  G   +L LD  SG GF S+ +YLFG+VS++IKLV GDSAGTVTAFYM+S+  N  +E DFEFLGN TG+PY VQTNIY NG G+REQR+NLWFDP   +H Y+ILW+   +VF VD+ PIRV KN
Sbjct:   27 AKFDELYRSSWAMDHC--VNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKN 169          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.183e-41
Identity = 77/146 (52.74%), Postives = 102/146 (69.86%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            A F  D ++TW D   +    G  + L LD+ SG GF SK +YLFG++ M+IKLV G+SAGTVTA+Y+ S   +  DE+DFEFLGN +G PYT+ TN++  GKGDREQ+  LWFDP +++H Y+ILWN   I+F VD  PIR +KN
Sbjct:   24 ANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKN 168          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.757e-39
Identity = 75/141 (53.19%), Postives = 99/141 (70.21%), Query Frame = 1
Query:  160 DFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            ++ VTW   H+ ++  G+ +QL +D +SG GF SK  Y  G   M+IKL P DSAG VTAFY+ S  +   DE+DFEFLGNR G+P  +QTN+++NG+G REQ+   WFDP  ++H Y ILWN + IVFYVD VPIRV+KN
Sbjct:   35 NYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDT-HDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKN 174          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.678e-39
Identity = 73/145 (50.34%), Postives = 101/145 (69.66%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            TF +++ VTW  +H+  +  G  + L +DQ+SG GF SK  Y  G   M+IK+  G++ G VTAFY+ S      DE+DFEFLGN  G+P T+QTN++ NG+G+RE+R  LWF+P  +YH Y +LWN + IVFYVD++PIRVYKN
Sbjct:   34 TFGQNYIVTWGQSHVSTLHSGEEVDLYMDQSSGGGFESKDAYGSGLFEMRIKVPSGNTGGIVTAFYLTSKGGG-HDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKN 177          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH26_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 26 OS=Arabidopsis thaliana GN=XTH26 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 8.722e-39
Identity = 77/146 (52.74%), Postives = 103/146 (70.55%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            A F ++F VTW   H+     G  ++LVLD+++G    SK  +LFG V M IKLVPG+SAGTV A+Y++S T +  DE+DFEFLGN TGQPYT+ TN+YA GKG+REQ+   WF+P   +H YTI WN   +V++VD  PIRV++N
Sbjct:   27 ADFSKNFIVTWGKDHM--FMNGTNLRLVLDKSAGSAIKSKVAHLFGSVEMLIKLVPGNSAGTVAAYYLSS-TGSTHDEIDFEFLGNATGQPYTIHTNLYAQGKGNREQQFRPWFNPTNGFHNYTIHWNPSEVVWFVDGTPIRVFRN 169          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.259e-37
Identity = 71/146 (48.63%), Postives = 101/146 (69.18%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F +D K+ W D   +  +  G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP AN+H Y I WN   I+F VD +PIR + N
Sbjct:   23 SFHKDVKIHWGDGRGKIHDNQGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMN 167          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.259e-37
Identity = 70/146 (47.95%), Postives = 101/146 (69.18%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F +D ++ W D   + +   G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  N+H Y I WN   I+F VD +PIR +KN
Sbjct:   28 SFHKDVQIHWGDGRGKVRDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKN 172          
The following BLAST results are available for this feature:
BLAST of CX671587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH21_ARATH4.469e-4356.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH5.837e-4354.11Xyloglucan endotransglucosylase/hydrolase protein ... [more]
BRU1_SOYBN9.956e-4353.10Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH9_ARATH2.218e-4257.53Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH4.183e-4152.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH1.757e-3953.19Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH3_ARATH6.678e-3950.34Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH26_ARATH8.722e-3952.74Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH1.259e-3748.63Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH1.259e-3747.95Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A02-B4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671587 ID=CX671587; Name=CX671587; organism=Citrus sinensis; type=EST; length=582bp
AATTAAAGTTCTCTTTCTAATTAGTAACAGATAATATTTTATTGTACGGC
TTGTTTTACAGCTATGGCTATCCTAAGAAATGCAATAGCATTATTTGTGT
TGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGGGCGACCGGCTACT
TTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCCATCTCAGGCAAAT
CGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAATTCAGGATGTG
GGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATC
AAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAA
TTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAA
ACCGAACGGGTCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGA
AAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAAA
TTATCACCTTTACACTATTCTCTGGAACCATCACCATATTGTCTTCTATG
TGGATGATGTGCCCATCAGGGTTTACAAAAAC
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