CX671587

Overview
NameCX671587
Unique NameCX671587
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.148e-37
Identity = 71/144 (49.31%), Postives = 103/144 (71.53%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            F +++ VTW   ++ ++  G+ +QL LD +SG GF SK  Y  G   ++IK+ P D++G VTAFY+ S   N  DE+DFEFLGN+ G+   VQTN++ NGKG+REQ++ LWFDP+ ++H Y ILWN + IV YVD++P+RV+KN
Sbjct:   39 FDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKG-NTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKN 180          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.806e-37
Identity = 70/146 (47.95%), Postives = 100/146 (68.49%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLR-QIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F +D ++ W D   +     G+ + L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  N+H Y I WN   I+F VD +PIR +KN
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKN 172          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.786e-37
Identity = 71/148 (47.97%), Postives = 101/148 (68.24%), Query Frame = 1
Query:  145 ATFLEDFKVTWSDAHLRQIEGG---RAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYK 579
            A F E F V  +  H+R +      + + L LD++SG GF SK  YLFG  S+++KLV G+SAGTVT+FY++S   +  DE+D EF+GN +G PY + TN++ANG G +E +  LWFDP A++H Y I+WN  +I+F VDDVP+R +K
Sbjct:   26 AGFYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFK 173          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.786e-37
Identity = 68/146 (46.58%), Postives = 102/146 (69.86%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEG-GRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYKN 582
            +F +D ++ W D   + ++  G  + L LD+ SG GF S +++L+G+V +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I+WN   ++F +D +PIR +KN
Sbjct:   28 SFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKN 172          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 1.491e-30
Identity = 68/148 (45.95%), Postives = 93/148 (62.84%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGK--GDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYK 579
            +F E +   + D +L   + G++++L LD+ +G GF S   YL G  S  IKL    +AG V AFYM++    E   DE+DFEFLGN   + + VQTNIY NG     RE+R NLWFDP  ++H Y+ILW+  HI+F+VD+VPIR  K
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVK 177          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30
Identity = 66/149 (44.30%), Postives = 91/149 (61.07%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV--RDELDFEFLGNRTGQPYTVQTNIYANGKGDR-----EQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVY 576
            F  +F+  W   H R+ +    + L LD+++G GF S R Y  G     IKL PG +AG  T+ Y+++N E+    DE+D EFLG   G+PY++QTN++  G GDR     E +  LWFDP  ++H Y ILWN + IVF+VDDVPIR Y
Sbjct:   39 FDREFRTLWGSQHQRREQD--VVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTY 185          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.947e-30
Identity = 69/147 (46.94%), Postives = 92/147 (62.59%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGKGD--REQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVYK 579
            F E +   + D +L     G++++L LD+ +G GF S   YL G  S  IKL    SAG V AFY+++    E   DE+DFEFLGN  G+ + +QTNIY NG     RE+R NLWFDP  ++H Y+ILW+  HI+FYVD+VPIR  K
Sbjct:   31 FDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVK 177          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.069e-28
Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 1
Query:  151 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGD-----REQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVY 576
            F + F+  W   H R  +   A+ + LD+ SG GF S + +  G     IKL PG +AG +T+ Y+++N  +    DE+D EFLG   G+PYT+QTN+Y  G GD     RE +  LWFDP  ++H Y ILW+   I+F VDD+PIR Y
Sbjct:   43 FYKGFRNLWGPQHQRMDQN--ALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRY 189          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.109e-28
Identity = 65/145 (44.83%), Postives = 87/145 (60.00%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDR--EQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIR 570
            +F E     + DA+L +     +++L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    E   DELD EFLGN  G+P+  QTN+Y NG   R  E+R  LWFDP+  +H Y+ILW  H I+F+VDDVPIR
Sbjct:   31 SFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIR 175          
BLAST of CX671587 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27
Identity = 63/143 (44.06%), Postives = 87/143 (60.84%), Query Frame = 1
Query:  148 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAANYHLYTILWNHHHIVFYVDDVPIRVY 576
            T+  ++  TW    L  I     +QL LD+NSG GF S+  Y  G  +++IK     S G +T+FY+ S +    DEL F+ LG + G PY + TN+Y  G+G ++QR  LWFDP  +YH Y+ LWN + +VFYVDD PIRVY
Sbjct:   23 TWGNNYYQTWGHQAL-VINKTSELQLTLDKNSGSGFESQLIYGSGYFNVRIKAPQTTSTGVITSFYLISRSSR-HDELCFQILG-KNGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVY 162          
The following BLAST results are available for this feature:
BLAST of CX671587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH1_ARATH2.148e-3749.31Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH17_ARATH2.806e-3747.95Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ4.786e-3747.97Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH20_ARATH4.786e-3746.58Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH27_ARATH1.491e-3045.95Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH1.947e-3044.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.947e-3046.94Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH1.069e-2842.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH3.109e-2844.83Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH11_ARATH5.864e-2744.06Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_12A02_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-12A02-B4-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671587 ID=CX671587; Name=CX671587; organism=Citrus sinensis; type=EST; length=582bp
AATTAAAGTTCTCTTTCTAATTAGTAACAGATAATATTTTATTGTACGGC
TTGTTTTACAGCTATGGCTATCCTAAGAAATGCAATAGCATTATTTGTGT
TGCTTTACTGTCTTGTATCCTGCTCTTGCGTTTTAGGGCGACCGGCTACT
TTTCTTGAGGATTTTAAAGTCACATGGTCCGATGCCCATCTCAGGCAAAT
CGAGGGAGGGAGGGCCATCCAGCTAGTTCTAGACCAAAATTCAGGATGTG
GGTTTGCTTCCAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATC
AAGCTCGTTCCTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAA
TTCCAACACCGAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAA
ACCGAACGGGTCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGA
AAAGGCGATAGAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAAA
TTATCACCTTTACACTATTCTCTGGAACCATCACCATATTGTCTTCTATG
TGGATGATGTGCCCATCAGGGTTTACAAAAAC
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