CX671584
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 2.697e-38 Identity = 84/204 (41.18%), Postives = 117/204 (57.35%), Query Frame = -1 Query: 197 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQG-RADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 805 LRV D + +NC YQDTLYV++ RQF+ N +++GTVDFIFG +A V+QN I RK + GQ N VTA G GIV+ RI +L+ + + +YLGRPWK+++ TVI+ + I D+I P GW EW G T Y E N G GA T+ R W +V SA E + +T +++ ++W+ P LGL Sbjct: 387 LRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.675e-37 Identity = 72/133 (54.14%), Postives = 91/133 (68.42%), Query Frame = -1 Query: 407 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGW 805 LR+ D++ Y C + AYQDTLY +S RQF+ +C I GTVDFIFG AAAV Q C I ARKP GQ N++TAQ R + +G QK I A+SDL P++G+ T+LGRPW+ +SR V M+S I DVI AGW Sbjct: 154 LRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.306e-36 Identity = 80/203 (39.41%), Postives = 115/203 (56.65%), Query Frame = -1 Query: 197 RVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQ-NTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 802 RV D + +NC YQDTLYV++ RQF+ N +++GTVDFI G +A V+QN I RK + GQ N VTA G+ GIV+ RI A +L+ + + +YLGRPWK ++ T ++ + I D+I P GW+EW G T Y E N G GA + RV W ++ SA E + FT +++ ++W+ LGL Sbjct: 371 RVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.211e-32 Identity = 78/192 (40.62%), Postives = 107/192 (55.73%), Query Frame = -1 Query: 230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805 LRV AD +AF+ C ML QDTLY H R ++ +C I G+VDFIFGNA ++ + C +HA G VTAQGR+ ++TG K ++ T L YLGR W +SR V + + ++I P GW+ W T+FYG+++ GAGA GRV W R +T EA+ F +FI GS W+ Sbjct: 205 LRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLG---AVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.872e-31 Identity = 72/192 (37.50%), Postives = 102/192 (53.12%), Query Frame = -1 Query: 230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805 LRV AD +AFY C + +YQDTL + +F NC I G DFI G+A+++ + C +H+ PN+G +TAQ R + +G ++ GS T+LGRPW YSR V S ++V+ P GW++W + NT++YGE++ G GA RV+W S EA F FI G WL Sbjct: 156 LRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGS---ITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWS---KQLSDEEATVFLSKDFIGGKDWL 332
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.039e-26 Identity = 70/197 (35.53%), Postives = 102/197 (51.78%), Query Frame = -1 Query: 230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDI--HARKPNSGQK---NMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805 +R+ D SAF C QDTL+ R +F +C I G++DFIFGNA ++ Q+C I A + + G K VTA GR+ ++N+G IG T + +LGR W+ YSR V + +++TDVI P GW+ ++ T+FYGE+ +G GA S R + + T+ SFI G WL Sbjct: 204 IRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAP---YVQKLNETQVALLINTSFIDGDQWL 388
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.039e-26 Identity = 67/197 (34.01%), Postives = 99/197 (50.25%), Query Frame = -1 Query: 224 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK---NMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGS 805 + V D SAFYNCD L QDT++ + R F NC I G +DFIFG+ +V ++C I+A K +TAQGR+ + +G V + V GS YLGR + +SR + +Q+ ++ V+HP GW+ W + Y E + GAG+ S RV W + S Q F+ +FI W+ + Sbjct: 104 ISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRG---------SVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.998e-26 Identity = 68/192 (35.42%), Postives = 90/192 (46.88%), Query Frame = -1 Query: 230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805 LR+ D + FY +L QDTL+ + +F C I G VDFIFGNA ++ Q+CDIH+ G + A R ++TG I T + YLGR W YSRTV I D+I P GW +W + +GE+ G GA GRV W + +T E + F FI G WL Sbjct: 202 LRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYG---AIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.175e-25 Identity = 69/197 (35.03%), Postives = 96/197 (48.73%), Query Frame = -1 Query: 221 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIH--ARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 805 LR+ D +AFY C QDTL R FF C I G++DFIFGN ++ Q+C I+ A+ SG +TAQGR ++ +G +I GS LGR W Y+ V + ++ +I P GW+ W + T+ +GEH+ G GA RV F + +EA +F SFI G WL T Sbjct: 204 LRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVL---FGKQLTDSEASSFIDVSFIDGDEWLRHT 388
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.535e-25 Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = -1 Query: 311 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKW 805 +RV AD AFYNC L +QDTLY+H +Q+ +C I G+VDFIFGN+ A+L++C IH + + +TAQ R ++TG V + I S YLGRPW + R V+ + + I GWH W + + E++ G G+ +S RV W Sbjct: 125 IRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPW 278 The following BLAST results are available for this feature:
BLAST of CX671584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671584 ID=CX671584; Name=CX671584; organism=Citrus sinensis; type=EST; length=805bpback to top |