CX671584

Overview
NameCX671584
Unique NameCX671584
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:658..1462. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.005e-25
Identity = 69/192 (35.94%), Postives = 90/192 (46.88%), Query Frame = -1
Query:  230 VGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 799
            +G D SAFY+      QDTL+    R +F  C I G VDFI G+  ++ Q+C I     +   G    +TAQGR + N   G V              V G    YLGR W+ YSR +   S++TDV+ P GW EW+       L Y EH   G+G+ TS R KW       SA+  Q     SFI    W+
Sbjct:  144 IGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCL---------VHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWV---KKLSASAVQHLADLSFINRGGWV 323          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.949e-25
Identity = 68/198 (34.34%), Postives = 91/198 (45.96%), Query Frame = -1
Query:  212 VGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFP 799
            +G D SAFY+      QDTL+    R +F  C I G VDFIFG   ++ Q+C I     +   G    +TAQGR +P    G +              V G+   +LGRPW+ YSR +   S++TDV+ P GW  W+     N L + EH   G+GA    RVKW       S +  Q     SFI    W+     P
Sbjct:  149 IGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCL---------VYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWV---KKLSESAIQNLADLSFINRGGWVEDLPIP 334          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 67/193 (34.72%), Postives = 97/193 (50.26%), Query Frame = -1
Query:  230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHA-RKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805
            L+V  D +AFY C     QDTL     R FF  C I G++DFIFGN  ++ ++C +H+  K N+     +TA G+      TG V    +I          GS   +LGR W+ Y+R +  ++ ++ V+   GW++        T++YGEH+  G GA  S RV    +  + S  EA  FT  SFI G  WL
Sbjct:  155 LKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENT--IGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVT---YAKLLSDVEAAPFTNISFIDGEEWL 333          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 65/161 (40.37%), Postives = 89/161 (55.28%), Query Frame = -1
Query:  335 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIHARK-PNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLF--YGEHQNAGAGA 805
            L   AD   +Y C+   YQDTL   +  Q ++N  I G VDFIFG +A A  QN DI   + P S     +TA GR+     +  VI KS + A       +G++  YLGRPW EY+R V  Q+S+T+VI+  GW EW  +   NT +  +GE+ N GAG+
Sbjct:  143 LSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVEGPTSAS---ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTS-TPNTEYVTFGEYANTGAGS 297          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.996e-21
Identity = 62/192 (32.29%), Postives = 91/192 (47.40%), Query Frame = -1
Query:  230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805
            +R+ AD +AFY+C    +QDTL       FF +C I GT DFIFG  A++  N  +HA     G + ++TAQGR    +  G      ++  T            YLGR W  + + V   + +T V++P+GW E        T+FYGE++  G G+    RV    +       E   F    +I GS+WL
Sbjct:  178 MRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA--VGDGLR-VITAQGRQSATEQNGYTFVHCKVTGTGT--------GIYLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVP---YTQDIDKNEVTPFLTLGYIKGSTWL 355          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.673e-21
Identity = 65/199 (32.66%), Postives = 87/199 (43.72%), Query Frame = -1
Query:  209 DLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARK---PNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQA--FTPGSFIAGSSWLGSTGFPF 790
            D  A  +     +QDTLY    R ++  C+I+G +DFIFG A ++ + C +  R    P +     +TAQGR  P    G V +            V GS    LGR WK YSR +  +S  +D I P GW  W        + + E    G GA TS RV W     +T A+E     FT  +FI    WL      F
Sbjct:  155 DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCT---------VMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPW-----LTKASEKDVLQFTNLTFIDEEGWLSRLPIKF 339          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.312e-20
Identity = 58/191 (30.37%), Postives = 92/191 (48.17%), Query Frame = -1
Query:  230 VGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 799
            V AD  AFY+C   +  +TL+ +  R ++  C I G++DFIFG A ++  NC+I        +    +TA  R    + TG V  + +         V G    YLGR    YSR +  ++ ++  + P GW  W  + +   L++GE++  G GA    R  W   + +T   E ++F    FI G+SWL
Sbjct:  158 VAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.644e-19
Identity = 63/189 (33.33%), Postives = 91/189 (48.15%), Query Frame = -1
Query:  233 ADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFG-NAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFA-LNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSW 793
            A    +Y C    YQDTL   +  Q +    I G VDFIFG +A A    CDI   +  S     +TA GR+  + ++  VI KS + A        G++  YLGRPW +Y+R    ++S+TDVI+  GW EW  +      + + E+ N G GA        +G R   S+   +  T  S++ GS W
Sbjct:  146 ASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSAS--ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGA--------EGPRANFSSELTEPITI-SWLLGSDW 321          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.662e-19
Identity = 57/192 (29.69%), Postives = 85/192 (44.27%), Query Frame = -1
Query:  230 RVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWD-GNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 802
            R+  D + F  C     QDTL   + R +F  C I G++DFIFGN  ++ ++C++H+     G    + A GR  P + TG      R         V G+ P Y+GR   +YSR V   +    ++   GW +WD  +    T F+G +   G GA  +  V W           A  F   SF+ G  W+
Sbjct:  181 RISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIASRFGS---IAAHGRTCPEEKTGFAFVGCR---------VTGTGPLYVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWAR---ALDYESAHPFIAKSFVNGRHWI 357          
BLAST of CX671584 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 58/192 (30.21%), Postives = 84/192 (43.75%), Query Frame = -1
Query:  230 LRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRADPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 805
            +R+  D +AFYNC    +QDTL       FF NC I GT DFIFG  A++     +HA     G + ++ A  R    +  G      ++               YLGR W  + + V   + ++ V++P+GW E        T+FYGE+   G G+  + RV            EA  F    +I GS WL
Sbjct:  178 MRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA--VGDGLR-VIAAHNRQSTTEQNGYSFVHCKVTGVGT--------GIYLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGSHKAKRV---AHTQDIDNKEASQFLTLGYIKGSKWL 355          
The following BLAST results are available for this feature:
BLAST of CX671584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME55_ARATH2.005e-2535.94Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME29_ARATH9.949e-2534.34Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME14_ARATH1.299e-2434.72Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME_ASPAC6.449e-2440.37Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME50_ARATH2.996e-2132.29Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME10_ARATH6.673e-2132.66Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME67_ARATH3.312e-2030.37Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME_ASPTU1.644e-1933.33Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME68_ARATH3.662e-1929.69Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME49_ARATH1.391e-1830.21Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11H12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11H12-P23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671584 ID=CX671584; Name=CX671584; organism=Citrus sinensis; type=EST; length=805bp
TTTTTTTTTTAATTTAAAGAAGCCGGAAATTATTATTCTTCCCATGCTAT
TTTATTTCTTGTTAATCACACAATAGTATTTGTGAAATCGAAGCCACGAA
TAAGACACGCTCAATCAAATATTACAAATTGAAAGACCAGAGACCTATGG
ATCCACTAATACAAAACATATTAATTAAAACTCCTAGTGAATATTACAAA
CCAAGGGAGAATGGGAAACCAGTGGAGCCCAGCCAGCTACTACCAGCAAT
GAAGCTTCCAGGAGTAAAAGCTTGAGCCTCGGTAGCACTTGTAATAACCC
TAAATCCCTTCCATTTCACTCTCCCTGAAGTTCCGGCACCGGCTCCGGCG
TTCTGATGCTCTCCGTAAAACAATGTGTTCAACGCGAAGTTACCATCCCA
CTCGTGCCACCCGGCAGGGTGGATCACGTCAGTAATCGATGACTGCATGA
TCACCGTCCTCGAGTACTCCTTCCAGGGCCTGCCGAGGTACGTCGGGAAA
CTACCCTGAACCGGTTTTAAATCGGAGGTGGCACCAATCCTAGATTTTTG
AATGACAATGCCGGTGTTTTGGTTAGGGTCAGCCCTGCCTTGGGCTGTGA
CCATATTTTTTTGGCCGGAATTGGGCTTTCGTGCATGGATGTCACAATTT
TGTAACACGGCTGCAGCGTTACCAAAAATAAAATCAACCGTGCCAGCAAT
TAAGCAGTTCACAAAGAACTGGCGGTTCGAGTGGACGTAGAGTGTGTCTT
GGTAAGCTAACATATCGCAATTGTAAAATGCTGAAAGGTCAGCTCCCACT
CGTAG
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