CX671582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.184e-29 Identity = 76/158 (48.10%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI+I++I+N T RQVTFSKRR GL KKA ELSVLCDAE+G+IIFS++GKLFE S+SSSMK II RY + + I++ ++ L ++ K E +R+M GEDL LT+ EL HL LE SRV K ++ ++ L RK Sbjct: 1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMK-----NENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRK 153
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.823e-28 Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGA 666 M R KI I++IDN RQVTFSKRR GL KKA EL++LCDA+VG+I+FS TG+L++ SSSSMK II RY +L +P E + + +L +++ + RQ+ GE++ T+ +LQ L+ +E L + K + EI L KG+ Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGS 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.543e-27 Identity = 71/159 (44.65%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYN---MHSSNISKLNHPSLEL-QLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS G+L+E +++S+K I RY S N S ++ + + Q E SK L +EI+ + R M GE L LT+ +L+ LET LE+G+SR+ K + + EI +++K Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASK---LRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKK 172
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.965e-26 Identity = 71/158 (44.94%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R +++R+I+N RQVTFSKRR GL KKA E+SVLCDA+V +I+FS GKL+E SS SSM+ I+ RY +S + + P+ E Q EN +Y L ++ + RQ+ GE L LTI+ELQ LE LE L + K + IS L++K Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 4.965e-26 Identity = 71/158 (44.94%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLEN--SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R +++R+I+N RQVTFSKRR GL KKA E+SVLCDA+V +I+FS GKL+E SS SSM+ I+ RY +S + + P+ E Q EN +Y L ++ + RQ+ GE L LTI+ELQ LE LE L + K + IS L++K Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQ-ENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.469e-26 Identity = 69/157 (43.95%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI+I+KI+N TARQVTFSKRR GL KK ELS+LCDA +G+I+FSATGKL E S + M +I RY +H++ + +H + QL + L L RE + +LR G DL + EL LE LE + +V + K + + ++ L RK Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRY-LHTNGLRLPDHHDDQEQLHHEMEL-LRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.469e-26 Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS G+L+E +++S++ I RY S+ +N PS+ Q + L R+I D R + GE L L +EL++LE LE+G+SRV K + ++ EI ++++ Sbjct: 16 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSD--AVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKR 171
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.469e-26 Identity = 68/150 (45.33%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMH-SSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEI 642 M R KI+I++I+N +RQVTFSKRR GL KKA ELSVLCDAEV VI+FS +GKLFE SS+ MK ++RY H SS+ SK E+ + L +++ + Q++G+ L+ LT +ELQ LE L L V + K + N++ Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRYGNHQSSSASKAEEDCAEVDI-------LKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQL 143
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.106e-25 Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAXXXXXXXXXXQKVASSCKGKR 729 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +I+FS GKL+E S+S M + RY S + + PS E + +YL L ++ R R + GEDL L+ +EL+ LE L++ L ++ K ++++++ L++K K+ SC R Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEESCASFR 179
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.445e-25 Identity = 66/158 (41.77%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLN-HPSLELQLEN-SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K+++++I+N +RQVTF+KRR GL KKA ELSVLCDAEV +IIFS G+LFE S+SS M + RY + N++ +LE +L N +YL L + R + GEDL L+++EL+ LE +E L + +K ++++++ L+RK Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRK 158 The following BLAST results are available for this feature:
BLAST of CX671582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671582 ID=CX671582; Name=CX671582; organism=Citrus sinensis; type=EST; length=778bpback to top |