CX671582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.445e-25 Identity = 66/158 (41.77%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLN-HPSLELQLEN-SKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K+++++I+N +RQVTF+KRR GL KKA ELSVLCDAEV +IIFS G+LFE S+SS M + RY + N++ +LE +L N +YL L + R + GEDL L+++EL+ LE +E L + +K ++++++ L+RK Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRK 158
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.445e-25 Identity = 66/158 (41.77%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI+I++I+N T RQVTFSKRR GL KKA EL+VLCDA VGV+IFS+TGK+FE S + S++++I +Y + +S+ ++NH ++ LE ++ + E+ +R+ G+DL LT++++ LE LE +S+V K + ++ L RK Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQ-QILLEMTR---MKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRK 154
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.445e-25 Identity = 66/159 (41.51%), Postives = 102/159 (64.15%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYN---MHSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS+ G+L+E +++S+K I RY SSN ++ + + Q E SK L +I + Q R M GE L L++ +L++LE +E+G+S++ K + + EI ++++ Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASK---LRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKR 172
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.445e-25 Identity = 66/158 (41.77%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV ++IFS G+L+E +++S++ I RY S+ +N P++ Q + L R+I D R + GE L L +EL++LE+ LE+G+SRV K + ++ EI ++++ Sbjct: 16 IGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSD--AVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKR 171
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: SEP1_ARATH (Developmental protein SEPALLATA 1 OS=Arabidopsis thaliana GN=SEP1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.887e-25 Identity = 69/157 (43.95%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS-SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E SSS+M + RY S +I N P+ EL+ +YL L + RQ R + GEDL L +EL+ LE L+ L +V K +++++S L+ K Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSNMLKTLDRYQKCSYGSIEVNNKPAKELENSYREYLKLKGRYENLQRQQRNLLGEDLGPLNSKELEQLERQLDGSLKQVRSIKTQYMLDQLSDLQNK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.887e-25 Identity = 63/156 (40.38%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPS-LELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 + R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +++FS G+L+E +++S+K I RY S+ S S Q + L +I + Q R M GE L G+ ++EL++LE +E+G+S++ K + + EI ++++ Sbjct: 17 LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKR 172
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL3_ARATH (Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana GN=AGL3 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.464e-25 Identity = 62/157 (39.49%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K+++++I+N RQVTF+KRR GL KKA ELSVLCDAE+ ++IFS GKL+E SS S M + +Y HS N + +LQ + YL L + R + GE+L + + EL+HLE ++ L ++ TK +++++S L+ K Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSSPSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.218e-25 Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E S+ + + RY N N+ E Q + L + R R + GEDL L+++ELQ LE LE LS+ Q K +M ++ L RK Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGITKTLERYQHCCYNAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQVEELRRK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.203e-25 Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMH--SSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTK 618 M R KI+I++I+N +RQVTFSKRR GL KKA ELSVLCDAEV VI+FS +GKLFE SS+SMK + RY + SS++ +N + E Q E ++ L EI+ + M+G+ L+ L+++ELQHLE L L V + K Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPGINCKT-ENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERK 142
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MADS7_ORYSJ (MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica GN=MADS7 PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 5.490e-25 Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E S+ SM + +Y S + N S +L+ ++YL L + + R R + GEDL L I+EL+ LE L+ L V T+ ++++++ L+RK Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTQSMTKTLEKYQKCSYAGPETAVQNRESEQLKASRNEYLKLKARVENLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHVRTTRTKHLVDQLTELQRK 159 The following BLAST results are available for this feature:
BLAST of CX671582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671582 ID=CX671582; Name=CX671582; organism=Citrus sinensis; type=EST; length=778bpback to top |