CX671582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 66/160 (41.25%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHS---SNISKLNHPS-LELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEVG+I+FS GKLFE ++ S M+ I+ RY +S + +H S + LE+ K L + R + GEDL L+++ELQ+LE L+ L + K + IS L++K Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRK---LKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 65/155 (41.94%), Postives = 88/155 (56.77%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTFSKRR GL KKA ELSVLCDAEV +IIFS+ GKL+E S ++ I RYN + N P Q + L + R R + GEDL + ++ELQ LE LE L+ Q K +M E+ L +K Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNRCYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALTATRQRKTQVMMEEMEDLRKK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 68/156 (43.59%), Postives = 93/156 (59.62%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISKLNHPSLE-LQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K+++++I+N RQVTFSKR+ GL KKA ELSVLCDAEV +IIFS GKL+E S+ + I RY N+ L++ +LE Q + L + R R + GEDL G++I+ELQ LE LE LS + K +M ++ L RK Sbjct: 1 MGRGKVEVKRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYRCKDNL--LDNDTLEDTQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRK 154
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL11_ARATH (Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana GN=AGL11 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 61/161 (37.89%), Postives = 102/161 (63.35%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARY------NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDAEV +I+FS G+L+E ++++++ I RY + ++S + ++N + Q E++K L ++I R + G+ L L+++EL+ +E LE+ +SR+ K + ++ EI +++ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNNIRSTIERYKKACSDSTNTSTVQEIN--AAYYQQESAK---LRQQIQTIQNSNRNLMGDSLSSLSVKELKQVENRLEKAISRIRSKKHELLLVEIENAQKR 156
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23 Identity = 62/158 (39.24%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSK--YLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R + ++++I+N T+RQVTFSKRR GL KKA ELSVLCDAEV +I+FS G+L+E +S+ S++ I RY ++ + +N+ +++ ++ K L L++++ R++ GE+L G +IEEL+ LE LE+ L + K + + +I+ L+ K Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKD--HVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIAKLKEK 156
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23 Identity = 64/177 (36.16%), Postives = 105/177 (59.32%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLEL---QLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAXXXXXXXXXXQKVASS 714 M R KI+I++I+N T+RQVTF KRR GL KKA EL++LCDAE+ +I+FS+ G+L+E S+ +S + I RY S++ S + P +++ Q + + +I R + GE + +T +EL+ LE LE+G+SR+ K + + +EI ++++ A KVA + Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSG-SAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEA 176
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.012e-23 Identity = 63/157 (40.13%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLE-NSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K+++++I+N RQVTFSKRR GL KKA E+SVLCDAEV +IIFS GKL++ ++ S M I+ RY +S L + Q +Y L ++ + + + GEDL L ++ELQ LE LE L + K ++ I+ L+RK Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.012e-23 Identity = 65/159 (40.88%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLN---HPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTF+KRR GL KKA ELSVLCDAEV +IIFS GKL+E SSSSM + RY + + N +LE+ +YL L R R + GEDL L +EL+ LE L+ L ++ T+ +++++ L+RK Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEIS-SQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRK 158
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23 Identity = 65/160 (40.62%), Postives = 98/160 (61.25%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQ----LENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEV ++IFS+ GKLFE S+ S M+ I+ RY+ + + +L + LE++K L E+ +K++ R GEDL L+++ELQ LE L + + K + IS L++K Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAK-LKARVEVLEKNK--RNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKK 157
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.934e-23 Identity = 66/160 (41.25%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKL----NHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R ++++++I+N RQVTFSKRR GL KKA E+SVLCDAEV +I+FS+ GKLFE S+ S M+ I+ RY+ + + +L S LE++K L E+ +K++ R GEDL L+++ELQ LE L+ + + K + IS L++K Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEHAK-LKARVEVLEKNK--RNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKK 157 The following BLAST results are available for this feature:
BLAST of CX671582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671582 ID=CX671582; Name=CX671582; organism=Citrus sinensis; type=EST; length=778bpback to top |