CX671582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.203e-21 Identity = 64/157 (40.76%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 MAR KI+I++I+N T RQVT+SKRR GLFKKA EL+VLCDA V +I+FS++ KL E S +++ K+I+ Y S++ +Q K L +R + Q++Q GE L L I+EL+ LE +E V + K + N+I T ++K Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQT-ISDVDVWATQYERMQETKRKLLETNRNL---RTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKK 153
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.399e-20 Identity = 72/206 (34.95%), Postives = 112/206 (54.37%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARY------NMHSSNIS-----KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAXXXXXXXXXXQKVASSCKGKRVVLVDSDIAIQEEGMS 777 MAR KI++++I+N RQVTF KRR GL KKA+ELSVLCDAE+GV+IFS GKLFE ++ +M+ +I +Y SS+ + +L P+L+ + E + L +EI + + M G + +EEL LE LE +S++ K D ++ EI +L K +K+ + ++D++ A+ E S Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEIN---VLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEIQSLRNKEGVLKNTNKYLLEKIEENNNS----ILDANFAVMETNYS 199
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD33_ORYSJ (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica GN=MADS33 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.944e-20 Identity = 63/157 (40.13%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIAD-KSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K+++R+I+N RQVTF KRR GL KKA ELSVLCDA+VGVIIFS+ GKL E +++ +M +++ RY + + ++ +L+ Q + + L RE D R LR G +T+++L LE LE + ++ TK + EI L K Sbjct: 1 MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATNGNMHNLVERYQSNVAG-GQMEPGALQRQQVAEQGIFLLREEIDLLQRGLRSTYGGGAGEMTLDKLHALEKGLELWIYQIRTTKMQMMQQEIQFLRNK 156
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSJ (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica GN=MADS26 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.070e-20 Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLH-GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 MAR K+++R+I+N RQVTF KRR GL KKA ELS+LC+A++G+IIFSA GKL++ +++ +M+++I RY S++ + N + + + L +EI + LR + G + +T+EEL LE LE + + K ++ EI L+ K Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK--SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD26_ORYSI (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica GN=MADS26 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 9.070e-20 Identity = 60/157 (38.22%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLH-GLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 MAR K+++R+I+N RQVTF KRR GL KKA ELS+LC+A++G+IIFSA GKL++ +++ +M+++I RY S++ + N + + + L +EI + LR + G + +T+EEL LE LE + + K ++ EI L+ K Sbjct: 1 MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATTGTMEELIERYK--SASGEQANACGDQRMDPKQEAMVLKQEINLLQKGLRYIYGNRANEHMTVEELNALERYLEIWMYNIRSAKMQIMIQEIQALKSK 155
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.185e-19 Identity = 60/141 (42.55%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-------SSSSSMKDIIARYNMHSSNIS-KLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQG 594 M R KI+I++I+N T RQVTFSKRR G+ KKA E+ VLCDAEVGV+IFS+ GKL + S + I+ +Y +S I H SL +++ K +E + +LR M+GEDL+ L +EL +E L G Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVK-----KENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNG 136
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.185e-19 Identity = 58/145 (40.00%), Postives = 89/145 (61.38%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMK--DIIARYNMHSSNISKLNHPSL---ELQLENSKYLSLSREIADKSRQ---LRQMRGEDLHGLTIEELQHLETMLEQGLSRV 606 M R +++++KI+N T RQVTFSKRR GL KKA EL++LCDA++GVI+FS TGK++E SS + +I RY L PS E+ ++ ++R + +R +RQ G+DL LT++++ +LE +E L +V Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRY---------LKAPSTRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKV 136
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.185e-19 Identity = 57/138 (41.30%), Postives = 88/138 (63.77%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYN-MHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLS 600 M R KI+I++I+N + RQVT+SKRR G+ KKA+E+SVLCDA V VIIF+++GK+ E S S+++ D++ Y+ + + H L+ ++ K + S +I +LR ++GED+ L +EL LE LE G S Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQI-----ELRHLKGEDITTLNYKELMVLEDALENGTS 133
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.020e-19 Identity = 65/163 (39.88%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARY------NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 MAR KI+I++I+N T RQVT+SKRR GLFKKA ELSVLCDA+V +I+ S+T KL E S +++ K + +Y ++ SS+ K+ L+ N +L REI RQ GE L+ L E++ +L ++ L + + K I N+I T ++K Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVGVDLWSSHYEKMQE---HLKKLNEVNRNLRREI-------RQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKK 153
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 59/160 (36.88%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE--SSSSSMKDIIARYNMHSS-NISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRV---------LQTKGDRIMNE 639 M R KI+I++I+N + RQVT+SKRR G+ KKA+E++VLCDA+V +IIF +GK+ E S S+++ D++ Y S + H +L +++ K +E + +LR ++GED++ L +EL LE L GLS + + K D+I+ E Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIK-----KENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEE 155 The following BLAST results are available for this feature:
BLAST of CX671582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671582 ID=CX671582; Name=CX671582; organism=Citrus sinensis; type=EST; length=778bpback to top |