CX671582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 60/195 (30.77%), Postives = 107/195 (54.87%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSS-SSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERKGAXXXXXXXXXXQKVASSCKGKRVVLVDSDIAIQEEGMS 777 M R+K++I++I+N ++RQVTFSKRR GL +KA +LS+LC++ + V++ S +GKL++S+S +M II RY +H ++ +L+L + YL L + +L + ++ +++ L LE LE LS K + +M E+ +L++ Q +AS K ++++ D + E S Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHAD----ELEALDLAEKTRNYLPLKELLEIVQSKLEE---SNVDNASVDTLISLEEQLETALSVTRARKTELMMGEVKSLQK----TENLLREENQTLASQVGKKTFLVIEGDRGMSWENGS 184
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.310e-18 Identity = 58/157 (36.94%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKL--FESSSSSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R K++IRKI+N T RQVTFSKRR G+ KKA+EL+VLCDA+V +++ S+T KL + S S+K + Y + +Q ++ K L L+ + R++ + G DL GLT+ EL L+ +E+ + ++ K I N+ T +K Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEY-QKIEGVDLWRKQWERMQEQHRKVLELNSLL---RREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKK 153
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.710e-18 Identity = 59/157 (37.58%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFE-SSSSSMKDIIARY-NMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 M R+K++I++I+N ++RQVTFSKRR GL +KA +LSVLCDA V +++ SA+GKL+ SS ++ I+ RY H+ ++ L+H S L S Y L E+ D ++ G ++ ++I+ L LE LE LS K + ++ + L+ K Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHADDLKALDHQSKALNY-GSHYELL--ELVDS-----KLVGSNVKNVSIDALVQLEEHLETALSVTRAKKTELMLKLVENLKEK 149
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.448e-17 Identity = 53/141 (37.59%), Postives = 83/141 (58.87%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISK----LNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRV 606 M R KI+I++I+N R VTFSKRR GL KKA+E++VLCDA+V +IIF++ GK+ + SM D+ A + + K H +L +++ K +E +LR ++GED+ L ++ L +E +E GL +V Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSM-DLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIK-----KENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKV 135
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16 Identity = 52/131 (39.69%), Postives = 74/131 (56.49%), Query Frame = 1 Query: 274 GLFKKAEELSVLCDAEVGVIIFSATGKLFESSSS--SMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSREIADKSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLERK 660 GL KKA EL++LCDA++GVIIFS++GK+FE SS SM++II RY S N + P + Q + + EI +R GEDL LT+ E+ LE LE +++V K + ++ L RK Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQKLSGNCA----PVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRK 128
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.312e-15 Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSS---SSMKDIIARYNMHSSNISKLNHPSLELQLENSKYLSLSR--EIAD-KSRQLRQMRGEDLHGLTIEELQHLETMLEQGLSRVLQTKGDRIMNEISTLE 654 M R + +I++I+N T RQ TF KRR GLFKKA EL+VLCDA++ +++FSA+GKL+ S S+++ + RY H + + + L + + D +QLR M +D T+ L+ LE LE + +V K +I EI L+ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERY-------EATTHTKVWADIRQERRAELEKVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQ 152
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.147e-14 Identity = 39/78 (50.00%), Postives = 51/78 (65.38%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHSSNISK 429 M R KI I KI N RQ TF+KR+ GL KKA ELS+LCD E+ +I+FS+ KLF+ SS M ++ RY ++ N K Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRYTDNTDNTRK 80
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.712e-14 Identity = 48/122 (39.34%), Postives = 68/122 (55.74%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARY----NMHSSNISKLN---HPSLELQLENSKYLSLSREIADKSRQLRQMRGEDL 540 + R+KI + KI + RQVTFSKRR GLFKKA EL LC AE+G+I+FS K F S++ ++ RY NM + +L S EL ++ + LS E K + + +MR E + Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSFGHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEMRKESV 183
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 36/73 (49.32%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHS 414 M R+KI+I +I + RQVTF+KR+ GL KKA ELSVLCD E+ +IIF++T KLF+ +S+ M ++ +Y ++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYN 73
BLAST of CX671582 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 36/73 (49.32%), Postives = 54/73 (73.97%), Query Frame = 1 Query: 196 MAREKIKIRKIDNITARQVTFSKRRRGLFKKAEELSVLCDAEVGVIIFSATGKLFESSSSSMKDIIARYNMHS 414 M R+KI+I +I + RQVTF+KR+ GL KKA ELSVLCD E+ +IIF++T KLF+ +S+ M ++ +Y ++ Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYN 73 The following BLAST results are available for this feature:
BLAST of CX671582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671582 ID=CX671582; Name=CX671582; organism=Citrus sinensis; type=EST; length=778bpback to top |