CX671553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A4_ARATH (Probable histone H2A.4 OS=Arabidopsis thaliana GN=At5g02560 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.056e-39 Identity = 82/105 (78.10%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 SRSVK+GLQFPVGRIGRYLKKGRYS+RVGTGAP GNAARDNKKNRIIPRHVLLAVRNDEELG LL GVTIAHGGVLPNINP+LLPKKS Sbjct: 26 SRSVKSGLQFPVGRIGRYLKKGRYSKRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGTLLKGVTIAHGGVLPNINPILLPKKS 130
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.349e-38 Identity = 81/105 (77.14%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 +RSVKAGLQFPVGRIGRYLKKGRY+QRVGTGAP GNAARDNKK RIIPRH+LLAVRNDEELGKLLAGVT AHGGVLPNINPVLLPKK+ Sbjct: 24 TRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKT 128
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A_MAIZE (Histone H2A OS=Zea mays PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.762e-38 Identity = 81/105 (77.14%), Postives = 84/105 (80.00%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 SRSVKAGLQFPVGRIGRYLKKGRY+Q VGTGAP GNAARDNKK RIIPRHVLLA+RNDEELGKLL GVTIAHGGVLPNINPVLLPKK+ Sbjct: 30 SRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKT 134
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.695e-38 Identity = 80/105 (76.19%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 ++S+KAGLQFPVGRIGRYLKKGRY+QRVG+GAP GNAARDNKK+RIIPRHVLLAVRNDEELGKLLAGVTIA GGVLPNINPVLLPKKS Sbjct: 23 TKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKS 127
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A3_WHEAT (Histone H2A.2.2 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.323e-37 Identity = 75/105 (71.43%), Postives = 87/105 (82.86%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 +RS+KAGLQFPVGRIGRYLKKGRY+QRVG+GAP GNAA+DNKK+RI+PRH+LLAVRND+ELG+LLAGVTIAHGGV+PNINPVLLPKK+ Sbjct: 23 TRSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKSRIVPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINPVLLPKKA 127
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A1_PEA (Histone H2A.1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.668e-37 Identity = 77/104 (74.04%), Postives = 85/104 (81.73%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 468 +RSV+AGLQFPVGR+GR+LKKGRY+QRVGTGAP GNAARDNKKNRI PRH+LLAVRNDEELGKLLAGVTIA+GGVLPNINPVLLPK+ Sbjct: 25 TRSVRAGLQFPVGRVGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDEELGKLLAGVTIAYGGVLPNINPVLLPKR 128
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A5_WHEAT (Protein H2A.5 OS=Triticum aestivum GN=H2A-2 PE=2 SV=3) HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37 Identity = 77/105 (73.33%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 +RSVKAGLQFPVGRIGRYLKKGRY+QRVG+GAP GNAA+DNKK RIIPRH+LLAVRND+ELG+LLAGVTIAHGGV+PNIN VLLPKKS Sbjct: 14 TRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPKKS 118
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A1_WHEAT (Histone H2A.1 OS=Triticum aestivum GN=H2A-9 PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 9.668e-37 Identity = 77/105 (73.33%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 +RSVKAGLQFPVGRIGRYLKKGRY+QRVG+GAP GNAA+DNKK RIIPRH+LLAVRND+ELG+LLAGVTIAHGGV+PNIN VLLPKKS Sbjct: 14 TRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIIPRHLLLAVRNDQELGRLLAGVTIAHGGVIPNINSVLLPKKS 118
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A2_PEA (Histone H2A.2 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.154e-36 Identity = 77/105 (73.33%), Postives = 85/105 (80.95%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 +RSV+AGLQFPVGRIGR+LKKGRY+QRVGTGAP GNAARDNKKNRI PRH+LLAVRND ELGKLLAGVTIA+GGVLPNINPVLLPK++ Sbjct: 25 TRSVRAGLQFPVGRIGRFLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRISPRHLLLAVRNDVELGKLLAGVTIAYGGVLPNINPVLLPKRT 129
BLAST of CX671553 vs. ExPASy Swiss-Prot
Match: H2A2_WHEAT (Histone H2A.2.1 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.813e-36 Identity = 72/105 (68.57%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 157 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 471 ++S+KAGLQFPVGRIGRYLKKGRY+QRVG+GAP GNAA+DNKK RI+PRH+LLA+RND+ELG+LL+GVTIAHGGV+PNINPVLLPKK+ Sbjct: 23 TKSIKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHLLLAIRNDQELGRLLSGVTIAHGGVIPNINPVLLPKKA 127 The following BLAST results are available for this feature:
BLAST of CX671553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671553 ID=CX671553; Name=CX671553; organism=Citrus sinensis; type=EST; length=732bpback to top |