CX671551

Overview
NameCX671551
Unique NameCX671551
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_MYCLE (Probable O-sialoglycoprotein endopeptidase OS=Mycobacterium leprae GN=gcp PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 57/176 (32.39%), Postives = 82/176 (46.59%), Query Frame = -1
Query:  146 GETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYVVKGMD--------VSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMI-AYTGLLAFAHGSSTPLE 646
            G T+D A G   D+ AR+L L      G  ++ LA+ G++  D     +GM          SFSG+ +   A A    ++ +  PAD+    QE +  +L     RA        +LIVGGV  N RL+E+    C+  G  L     R+C DNGAMI A+   L  A    +PL+
Sbjct:  168 GSTVDDAAGEAYDKVARLLGLGYPG--GKVLDDLARTGDR--DAIVFPRGMTGPADDLNAFSFSGLKT---AVARYVESHPDALPADVAAGFQEAVADVLTMKAVRAATGLGVSTLLIVGGVAANSRLRELAAQRCAAAGLMLRIPGPRFCTDNGAMIAAFAAHLLAAAAPPSPLD 336          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_GEOSM (Probable O-sialoglycoprotein endopeptidase OS=Geobacter sp. (strain M21) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 53/166 (31.93%), Postives = 78/166 (46.99%), Query Frame = -1
Query:  185 GRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPG-YNIEQLAKKGE----KFLDLPYVVKG-MDVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTG 664
            GRY+  G+T+D A G   D+ A+++ L   P PG   I++LA  G+    KF   P +  G  + SFSG+ + +     +     E    DL  S Q  +  +L + T  A+A    K +++ GGV CN  L+  M    +  G  L       C DN AMIA  G
Sbjct:  148 GRYQTLGQTVDDAAGEAFDKVAKLIGL---PYPGGVAIDRLAVSGDPKAIKF-PRPLLHDGTFNFSFSGLKTAVLTHVGKHPEAKEAGINDLAASFQAAVCEVLTKKTAAAVAATGIKRLVVAGGVACNSALRRSMAEYAAANGVELSIPSPALCADNAAMIAVPG 309          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_FUSNN (Probable O-sialoglycoprotein endopeptidase OS=Fusobacterium nucleatum subsp. nucleatum GN=gcp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 56/170 (32.94%), Postives = 82/170 (48.24%), Query Frame = -1
Query:  194 NTQVIAYSEGRYRI-FGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEK-FLDLPYV-VKGMDVSFSGI-LSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIA 691
            +T +I   E    I  GET+D AVG   D+ ARVL L     P   I+++  KG++ FL +    V   D SFSGI  + I      K+ N E    DL  S   T+  +L + T  A    + K +++ GGV  N  L+  +    +E+G ++     + C DN AMIA
Sbjct:  138 HTNIIYIDENHNFINIGETLDDAVGESCDKVARVLGLGYPGGPV--IDKMYYKGDRDFLKITKPKVSRFDFSFSGIKTAIINFDNNMKMKNQEYKKEDLAASFLGTVVDILCDKTLNAAVEKNVKTIMLAGGVAANSLLRSQLTEKAAEKGIKVIYPSMKLCTDNAAMIA 305          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_DEHSC (Probable O-sialoglycoprotein endopeptidase OS=Dehalococcoides sp. (strain CBDB1) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = -1
Query:  146 CVVCQRWNTQVIAYS-EGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLP--YVVKGMDVSFSGILSYIEATAAEKL--NNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDR-YCVDNGAMIAYTGLLAFAHGSSTPLE 712
            C+     +T ++  S  G+Y++ G T D A G   D+ AR+L LS    P   I++ ++ G+  LDLP  ++    D SFSG+      TA  +L  +   C+  D   S Q+ +  +LV  T       + K +L+ GGV  N     ++R   SE+     +      C DN A+IA  G   F  G    L+
Sbjct:  132 CLTVSGGHTDLVLMSGHGQYQLLGRTRDDAAGEAFDKAARILGLSYPGGPA--IDRASQDGQAVLDLPRSWIPGSHDFSFSGL-----KTALLRLVESGEVCSVNDAAASFQKAVVDVLVTKTINCAQEYNVKQILLAGGVAAN----NLLRKQLSEKSSLPVSIPPMGLCTDNAAVIASCGYFRFISGKQDGLD 315          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_DEHSB (Probable O-sialoglycoprotein endopeptidase OS=Dehalococcoides sp. (strain BAV1) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 57/195 (29.23%), Postives = 89/195 (45.64%), Query Frame = -1
Query:  146 CVVCQRWNTQVIAYS-EGRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLP--YVVKGMDVSFSGILSYIEATAAEKL--NNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDR-YCVDNGAMIAYTGLLAFAHGSSTPLE 712
            C+     +T ++  S  G+Y++ G T D A G   D+ AR+L LS    P   I++ ++ G+  LDLP  ++    D SFSG+      TA  +L  +   C+  D   S Q+ +  +LV  T       + K +L+ GGV  N     ++R   SE+     +      C DN A+IA  G   F  G    L+
Sbjct:  132 CLTVSGGHTDLVLMSGHGQYQLLGRTRDDAAGEAFDKAARILGLSYPGGPA--IDRASQDGQAVLDLPRSWIPGSHDFSFSGL-----KTALLRLVESGEVCSVNDAAASFQKAVVDVLVTKTINCAQEYNVKQILLAGGVAAN----NLLRKQLSEKSSLPVSIPPMGLCTDNAAVIASCGYFRFISGKQDGLD 315          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_CHLPB (Probable O-sialoglycoprotein endopeptidase OS=Chlorobium phaeobacteroides (strain BS1) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 55/182 (30.22%), Postives = 82/182 (45.05%), Query Frame = -1
Query:  152 YRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEK-FLDLPYVV-----------KGMDVSFSGI-LSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHGSSTP 658
            Y++ G TID A G   D+  ++L L  D   G  I++LA  G+  F + P  +              D SFSG+  S +     +  +  E    D+  S+QE + ++LVE T  A        + + GGV  N  L++ M   C   G RL+     Y  DN AMIA    L  + G++TP
Sbjct:  153 YQVIGRTIDDAAGEAFDKTGKMLGL--DYPAGPVIDRLAADGDPGFHEFPRALTSQSRTSKSYRNNFDFSFSGLKTSVLHYIGKQDPSYIERHLQDIAASVQEAITSVLVEKTVAAAKKYRINAISVAGGVSANSGLRQKMAVACEANGLRLYIPKPVYSTDNAAMIATFAHLKLSRGTTTP 332          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_THET8 (Probable O-sialoglycoprotein endopeptidase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 54/160 (33.75%), Postives = 73/160 (45.62%), Query Frame = -1
Query:  194 GRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYVVKGM---DVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIA 664
            GRYR+ G T D A G   D+ AR+L L     P   +E+LA++ E+ +  P  ++G    D SFSG+      T A  L       A L    QE   A L E+  +A      + +L+ GGV  N  LQE  +    E G  +         DNGAMIA
Sbjct:  149 GRYRLLGATRDDAAGEAFDKVARLLGLGFPGGP--EVERLAEEAEEAIPFPVPLRGQEGYDFSFSGL-----KTKALHLVEKGLPKAALAKGFQEAAIAHLAEVVLKAAKDTGHRVLLVAGGVAANRALQERFK----EAGLEVHFPPRGLSQDNGAMIA 297          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_THET2 (Probable O-sialoglycoprotein endopeptidase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 54/160 (33.75%), Postives = 73/160 (45.62%), Query Frame = -1
Query:  194 GRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYVVKGM---DVSFSGILSYIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIA 664
            GRYR+ G T D A G   D+ AR+L L     P   +E+LA++ E+ +  P  ++G    D SFSG+      T A  L       A L    QE   A L E+  +A      + +L+ GGV  N  LQE  +    E G  +         DNGAMIA
Sbjct:  146 GRYRLLGATRDDAAGEAFDKVARLLGLGFPGGP--EVERLAEEAEEAIPFPVPLRGQEGYDFSFSGL-----KTKALHLVEKGLPKAALAKGFQEAAIAHLAEVVLKAAKDTGHRVLLVAGGVAANRALQERFK----EAGLEVHFPPRGLSQDNGAMIA 294          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_STRP8 (Probable O-sialoglycoprotein endopeptidase OS=Streptococcus pyogenes serotype M18 GN=gcp PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = -1
Query:  173 NTQVIAYSE-GRYRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYVV---KGMDVSFSGILS-YIEATAAEKLNNNECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAF 691
            +T+++   E G Y I GET D AVG   D+  RV+ L+     G  I+QLA KG+     P  +     ++ SFSG+ S +I      K   +E    DLC S Q  +  +L+  T++A++    K +++ GGV  N+ L++ +    +     +     R C DN  MIA    + +
Sbjct:  141 HTELVYVPEPGDYHIIGETRDDAVGEAYDKVGRVMGLTYPA--GREIDQLAHKGQDTYHFPRAMITEDHLEFSFSGLKSAFINVHHNAKQKGDELILEDLCASFQAAVLDILLAKTKKALSRYPAKMLVVAGGVAANQGLRDRLAQEITHI--EVVIPKLRLCGDNAGMIALAAAIEY 314          
BLAST of CX671551 vs. ExPASy Swiss-Prot
Match: GCP_STAS1 (Probable O-sialoglycoprotein endopeptidase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=gcp PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.384e-11
Identity = 52/173 (30.06%), Postives = 76/173 (43.93%), Query Frame = -1
Query:  164 YRIFGETIDIAVGNCLDRFARVLTLSNDPSPGYNIEQLAKKGEKFLDLPYV---VKGMDVSFSGILSYIEATAAEKLNN-----NECTPADLCYSLQETLFAMLVEITERAMAHCDKKDVLIVGGVGCNERLQEMMRTMCSERGGRLFATDDRYCVDNGAMIAYTGLLAFAHG 658
            + + GET D AVG   D+ AR + LS    P   ++ LA  GE   D P V       D SFSG+ S +      KL+N          A++  S Q ++  +LV  T  A  + +   +++ GGV  N+ L+  + + C      L     + C DN AMI   G   F  G
Sbjct:  154 FEVIGETRDDAVGEAYDKVARTIGLSYPGGP--QVDNLAAHGEDSYDFPRVWLDKNSYDFSFSGLKSAV----INKLHNLRQKGEAINEANVATSFQNSVVEVLVGKTIAACKNYNVNQLIVAGGVASNKGLRAHLSSACESNDINLSIPSPKLCTDNAAMIGAAGYYLFKAG 320          
The following BLAST results are available for this feature:
BLAST of CX671551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GCP_MYCLE1.060e-1132.39Probable O-sialoglycoprotein endopeptidase OS=Myco... [more]
GCP_GEOSM1.060e-1131.93Probable O-sialoglycoprotein endopeptidase OS=Geob... [more]
GCP_FUSNN1.060e-1132.94Probable O-sialoglycoprotein endopeptidase OS=Fuso... [more]
GCP_DEHSC1.060e-1129.23Probable O-sialoglycoprotein endopeptidase OS=Deha... [more]
GCP_DEHSB1.060e-1129.23Probable O-sialoglycoprotein endopeptidase OS=Deha... [more]
GCP_CHLPB1.060e-1130.22Probable O-sialoglycoprotein endopeptidase OS=Chlo... [more]
GCP_THET81.384e-1133.75Probable O-sialoglycoprotein endopeptidase OS=Ther... [more]
GCP_THET21.384e-1133.75Probable O-sialoglycoprotein endopeptidase OS=Ther... [more]
GCP_STRP81.384e-1129.78Probable O-sialoglycoprotein endopeptidase OS=Stre... [more]
GCP_STAS11.384e-1130.06Probable O-sialoglycoprotein endopeptidase OS=Stap... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_11G04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11G04-N7-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671551 ID=CX671551; Name=CX671551; organism=Citrus sinensis; type=EST; length=727bp
ACTGCCAGAATGATCCTACCTCTAAATCTACCATCTGAATCAGCTAGCTT
CCTTAATGACTACCATTCTTGCAAGCTGAATCTTCTTTTTCTCTCCAGAC
TGCATGCACTTCATCCGTCCTGAATCGCTGGGTAAAGGTTGATTCCTCTA
ACGGAGTTGATGAACCATGAGCAAAAGCAAGCAGACCGGTGTACGCAATC
ATTGCTCCGTTGTCAACACAATATCGGTCATCCGTTGCAAACAGCCTTCC
ACCCCGCTCGGAGCACATTGTTCTCATCATCTCTTGCAAGCGCTCGTTAC
AACCCACACCGCCTACAATAAGAACATCCTTTTTGTCACAATGTGCCATT
GCCCGTTCCGTGATCTCCACAAGCATCGCAAAAAGAGTTTCCTGCAGGGA
ATAGCACAAATCTGCAGGAGTGCACTCATTATTGTTGAGCTTCTCCGCAG
CAGTTGCTTCAATATAGCTCAATATCCCGCTAAAAGAGACATCCATCCCT
TTTACAACATAAGGAAGATCAAGAAACTTTTCCCCTTTCTTTGCCAGCTG
CTCAATGTTGTATCCAGGGCTTGGATCATTGGACAGCGTTAAAACCCTTG
CAAACCGATCCAAGCAGTTACCCACAGCAATATCGATAGTCTCCCCAAAG
ATCCGATACCTTCCTTCACTATAAGCAATCACCTGGGTATTCCACCGCTG
ACATACAACACAACAGGATCCTCCGCT
back to top