CX671541

Overview
NameCX671541
Unique NameCX671541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMOH2_SCHPO (Putative primary amine oxidase 2 OS=Schizosaccharomyces pombe GN=SPAC2E1P3.04 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.352e-16
Identity = 72/240 (30.00%), Postives = 102/240 (42.50%), Query Frame = 1
Query:  142 VFICKCKVRPVEYTHIDQIKEDQQG--KLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVT---RRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPME-FAMVNPNKKTKI-GHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTL----LQCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            V  C+ K+  +  T+     ED +G    V       NH H     L+  +DGY+NS      V+      +K N    ++ T E+   KT  EA    ++     + + NPNK     G                         RAGF  ++I VTPY   + Y  G+YV Q+ G+ T         + +  ++N DIV+W+T GI H P  EDFP+MP       LRP NFF  NP L
Sbjct:  420 VIECELKLTGILNTYAMNEGEDLKGWGTQVYPQVNAHNHQHLFCLRLNPMLDGYSNSVAVVDGVSGPGEPGSKENYYGNAF-TTERTVPKTVKEAICDYNSDTSRTWDICNPNKLHPYSGKPVSYKLVSRETPRLMARPGSLVSNRAGFARHHIHVTPYKDGQIYPAGDYVPQTSGEPTKGLPEWIAEEPDASVDNTDIVVWHTFGITHFPAPEDFPLMPAEPIRLLLRPRNFFLRNPAL 658          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMOH1_SCHPO (Putative primary amine oxidase 1 OS=Schizosaccharomyces pombe GN=SPBC1289.16c PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.938e-16
Identity = 64/237 (27.00%), Postives = 103/237 (43.46%), Query Frame = 1
Query:  148 ICKCKVRPVEYTHIDQIKEDQQ----GKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TVEKET-AKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQCT-----DGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            + +C++R     + + I ED+     G  V       NH+H     ++  +DG  NS      +  +N    T    Y   E  T A + +++             ++P     + +                T+ D     +GF + NI+VTPY   + +  G+Y  Q+  DDT    +     D N +I+N DIV+W+T G+ H P  EDFP+MP  S    L+P NFF++NP L
Sbjct:  407 VIECEIRLTGILNTNAINEDEDLKGHGTQVYPKISAENHEHLFCLRINPMLDGLRNSVATVDALRDKN---GTLVSKYIIPETVTEAISNYDSSTGRTWDICNLNKLHPYSGKPVSYKLISRDTSPVLSQPGTTNSDC----SGFAENNIYVTPYMDDQIFPTGDYAPQA-SDDTPKGLSKWISDDPNAQIKNTDIVVWHTFGMIHFPAPEDFPIMPAESIHLFLQPRNFFKHNPAL 635          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: ABP1_MOUSE (Amiloride-sensitive amine oxidase [copper-containing] OS=Mus musculus GN=Abp1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.436e-15
Identity = 62/235 (26.38%), Postives = 99/235 (42.13%), Query Frame = 1
Query:  148 ICKCKVRPVEYTHIDQIKED--QQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFE--KTKLVTRRNTKANTPRKSY*TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLL--QCTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSG--GFELRPTNFFEYNPVL 828
            + + K+    Y H      +  + G  +  + +G  H H ++Y +DLD+ G  NSF   KTKL    N  + +      T+E+     E +A  +      ++ + +  +K + GH                      +    +  Y + VT Y +SE+YS   Y      D  ++  +    N  IEN+D+V W T+G  H P  ED P   T     GF +RP NFFE +P L
Sbjct:  474 VMETKMHATGYVHATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVDLDVAGTKNSFRTLKTKLENITNPWSPSHSLVQPTLEQTQYSHEHQAAFRFGQTLPKYLLFSSPQKNRWGHRRSYRLQIHSMAEQVLPPGWQEERAVTWARYPLAVTKYRESERYSSSLYNQNDPWDPPVVFEEFLRNNENIENEDLVAWVTVGFLHIPHSEDVPNTATPGNCVGFLIRPFNFFEEDPSL 708          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: ABP1_HUMAN (Amiloride-sensitive amine oxidase [copper-containing] OS=Homo sapiens GN=ABP1 PE=1 SV=4)

HSP 1 Score: 77.411 bits (189), Expect = 1.093e-13
Identity = 63/235 (26.81%), Postives = 95/235 (40.43%), Query Frame = 1
Query:  148 ICKCKVRPVEYTHIDQIKED--QQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*--TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYV--DQSHGDDTLLQCTDGNREIENKDIVLWYTMGIHHAPCQEDFP--VMPTVSGGFELRPTNFFEYNPVL 828
            + + K+    Y H      +  + G  +  + IG  H H ++Y +DLD+ G  NSF+  ++     T   +PR      T+E+     E +A  +   K  ++ +    ++   GH                      +    +  Y + VT Y +SE  S   Y   D  H      Q    N  IEN+D+V W T+G  H P  ED P    P  S GF LRP NFF  +P L
Sbjct:  474 VMEAKMHATGYVHATFYTPEGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWERQAAFRFKRKLPKYLLFTSPQENPWGHKRTYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQNDPWHPPVVFEQFLHNNENIENEDLVAWVTVGFLHIPHSEDIPNTATPGNSVGFLLRPFNFFPEDPSL 708          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: ABP1_RAT (Amiloride-sensitive amine oxidase [copper-containing] OS=Rattus norvegicus GN=Abp1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 59/235 (25.11%), Postives = 97/235 (41.28%), Query Frame = 1
Query:  148 ICKCKVRPVEYTHIDQIKED--QQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*--TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLL--QCTDGNREIENKDIVLWYTMGIHHAPCQEDFP--VMPTVSGGFELRPTNFFEYNPVL 828
            + + K+    Y H      +  + G  +  + +G  H H ++Y +D+D+ G  NSF+   +     T   +P  S    T+E+     E +A  +      ++ + +  +K   GH                      +    +  Y + VT Y +SE+YS   Y      D  ++  +    N  IE++D+V W T+G  H P  ED P    P  S GF LRP NFF  +P L
Sbjct:  469 VMEAKMHATGYVHATFYTPEGLRHGTRLQTHLLGNIHTHLVHYRVDMDVAGTKNSFQTLTMKLENLTNPWSPSHSLVQPTLEQTQYSQEHQAAFRFGQTLPKYLLFSSPQKNCWGHRRSYRLQIHSMAEQVLPPGWQEERAVTWARYPLAVTKYRESERYSSSLYNQNDPWDPPVVFEEFLRNNENIEDEDLVAWVTVGFLHIPHSEDVPNTATPGNSVGFLLRPFNFFPEDPSL 703          
BLAST of CX671541 vs. ExPASy Swiss-Prot
Match: AMO_PICAN (Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.830e-12
Identity = 60/213 (28.17%), Postives = 85/213 (39.91%), Query Frame = 1
Query:  214 GKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLVTRRNTKANTPRKSY*TV---EKETAKTEFEARLKLDTKP-MEFAMVNPNKKTKI-GHXXXXXXXXXXXXXXXXTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQ---CTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVL 828
            G  V  N    NH H  +  +D  IDG  NS       +       +P   Y      EK T KT  ++    ++     + + NPNK     G                  +      RA +  +++ V PY  +  Y  G++V Q  GD          DG+  I+N DI+ ++T GI H P  EDFP+MP       LRP +FF  NP L
Sbjct:  444 GTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAACDAKSSPYP-LGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTDILFFHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTENPGL 655          
The following BLAST results are available for this feature:
BLAST of CX671541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AMOH2_SCHPO2.352e-1630.00Putative primary amine oxidase 2 OS=Schizosaccharo... [more]
AMOH1_SCHPO8.938e-1627.00Putative primary amine oxidase 1 OS=Schizosaccharo... [more]
ABP1_MOUSE4.436e-1526.38Amiloride-sensitive amine oxidase [copper-containi... [more]
ABP1_HUMAN1.093e-1326.81Amiloride-sensitive amine oxidase [copper-containi... [more]
ABP1_RAT1.427e-1325.11Amiloride-sensitive amine oxidase [copper-containi... [more]
AMO_PICAN7.830e-1228.17Peroxisomal primary amine oxidase OS=Pichia angust... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11F10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F10-L19-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671541 ID=CX671541; Name=CX671541; organism=Citrus sinensis; type=EST; length=832bp
CTCGTGCCTCTCTTCCGGTTTATATTCAAAATGCATATATGTCTTACCAA
GAATTGCAAATTAAAAGCCACAACTCACAGCACCTCCATTACAAATGGGT
TGGAAAAGTCCAATATTTAGTAAACTAATAATACTTAATTAGTGTTCATA
TGTAAGTGCAAAGTGAGGCCAGTAGAGTACACTCATATAGATCAGATAAA
AGAGGATCAACAGGGGAAATTGGTAGCAGATAATACTATCGGGGTCAATC
ACGATCACTTCTTGAACTATTATCTTGATCTTGATATTGATGGTTATGCC
AATTCCTTTGAGAAGACCAAATTGGTTACCAGGCGAAACACAAAAGCTAA
TACACCAAGAAAGAGTTATTAGACTGTTGAAAAAGAAACAGCTAAGACTG
AATTTGAAGCTCGGCTTAAGCTTGACACAAAGCCAATGGAATTTGCAATG
GTGAATCCAAATAAGAAAACTAAAATTGGGCACCCTGTTGGCTATCGCCT
GCTTCCAGGATTAGTCGTAGGTCCGCTGCTAACGGATGATGATTATCCAC
AAATCCGAGCCGGCTTCACTGATTATAATATTTGGGTTACCCCATATAAC
AAGTCAGAAAAATATTCAGGAGGAAACTATGTTGATCAAAGCCATGGTGA
TGATACCTTATTGCAATGTACTGACGGGAATAGGGAGATTGAGAACAAGG
ATATAGTACTTTGGTACACTATGGGCATTCATCATGCTCCTTGCCAGGAA
GATTTTCCGGTGATGCCAACAGTGAGTGGTGGATTCGAGCTCCGACCAAC
TAATTTCTTTGAATATAATCCAGTGCTTAAAG
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