CX671534

Overview
NameCX671534
Unique NameCX671534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:387..1129. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.280e-33
Identity = 92/249 (36.95%), Postives = 138/249 (55.42%), Query Frame = 3
Query:   15 RGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDV--IHAFKPNPKSHI----QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            RGS +T RD  GFA +FY  EGN+D++GN+IPVFFI D I  P +  +HA KPNP+ H+    Q+  RI D  +   +SL+  S    + G P+ Y + E    ++F LV  NGK      HW+P  G   L   EEA +       +  ++L++SI      + +L IQ++  +++ +  F+  +VTK     ++PL   G+LV NKNI   F E     F PG +V G+ ++ D +LQ R+F+Y DT
Sbjct:  109 RGSADTARDVHGFATRFYVDEGNFDIVGNNIPVFFIWDVIIEPTLMALHAQKPNPRFHLPRGQQDPNRISDNLTARGDSLAQGSQISSERGSPKAYSNTEPNKHRSFRLVTDNGKQFQCSNHWQPLQGFIDL-GVEEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVFNKNIQMLFNEVIGAMFQPGHIVRGVDFTEDPLLQGRLFSYLDT 356          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14
Identity = 73/247 (29.55%), Postives = 112/247 (45.34%), Query Frame = 3
Query:   30 TLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSH-----LPESLSTFSWF-FDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLD---VTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            T+RD   FA KF +     +L+GN+ P+ F    + F  ++ A K    +    +    +  +      LP SL   S+F          +RHM G+G  TF LV K+G V+  KF +K   G    +  ++A +V   +  +     + + AAG YP W+L  Q +       F+ DP +    TK  P + +PL     L+LN+N  N FAE E +  +      G     D ++Q R FAY DT
Sbjct:  109 TVRDADAFAAKFASAAALQELVGNNSPISFFIFDLLFAAILFASKAKAANQAA-FAAAAELAAESLFVRLP-SLHQVSFFALAGFAAVAAHRHMNGYGSHTFKLVAKDGSVYCSKFWYKADQGQAAEV-WKDAEEVAAEDVDYFRDLNFQAEAAGRYPLWELASQVMT---FSDFEIDPFNENIPTKVVPRESVPLIVDAELLLNRNPLNMFAEVEQVFMDVAAASKGADEVEDPLIQ-RQFAYIDT 348          
The following BLAST results are available for this feature:
BLAST of CX671534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CAT1_PENJA2.280e-3336.95Catalase OS=Penicillium janthinellum PE=1 SV=1[more]
CATA_PENJA1.815e-1429.55Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11F06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F06-L11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671534 ID=CX671534; Name=CX671534; organism=Citrus sinensis; type=EST; length=743bp
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAAGGCT
TCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGCACTAT
GTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATGA
TGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAGG
ATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTAC
ATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACT
GGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTG
GACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAA
ATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAA
TGATAAGATGCTCCAATGCCGAATCTTTGCCTATGGTGATACC
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