CX671534

Overview
NameCX671534
Unique NameCX671534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:387..1129. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_VIBVU (Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.700e-71
Identity = 124/247 (50.20%), Postives = 170/247 (68.83%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            VIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF S  P + +  +W + ++G P  YR M+GFGV  +  +N+ G+V+YVKFHWK   GVK L    E  KV G + +H T DLY  I AGN+P+W LY++ + P    + D++ LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DT
Sbjct:  113 VIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVYTNLGTPASYRTMDGFGVHAYKWINRKGEVNYVKFHWKSQQGVKSL-RPAEVTKVQGEDFNHLTNDLYTQINAGNFPKWDLYVKVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADT 356          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_VIBVY (Catalase OS=Vibrio vulnificus (strain YJ016) GN=VVA0294 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 6.138e-71
Identity = 124/247 (50.20%), Postives = 170/247 (68.83%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            VIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF S  P + +  +W + ++G P  YR M+GFGV  +  +N+ G+V+YVKFHWK   GVK L    E  KV G + +H T DLY  I AGN+P+W LY++ + P    + D++ LD TK W +  +P + VG + LN+  DNFF E E  AF P  ++PGI  S D++LQ R+FAY DT
Sbjct:  113 VIHSKGSPETLRDPRGFATKFYTDQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPSATNMLTWVYTNLGTPASYRTMDGFGVHAYKWINQKGEVNYVKFHWKSQQGVKSL-RPAEVTKVQGEDFNHLTNDLYTQINAGNFPKWDLYVKVLSPKALSKLDYNGLDATKVWLD--VPEKKVGTMTLNRVPDNFFLETEQSAFAPSNIIPGIEPSEDRLLQGRLFAYADT 356          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA1_CAEEL (Peroxisomal catalase 1 OS=Caenorhabditis elegans GN=ctl-2 PE=2 SV=3)

HSP 1 Score: 263.077 bits (671), Expect = 1.158e-69
Identity = 126/244 (51.64%), Postives = 172/244 (70.49%), Query Frame = 3
Query:   12 ERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            E GS +T RDPRGFA+KFYT EGNWDL+GN+ P+FFIRD I FP+ IH  K NP++H+++   I DF  H PE+L    + F D G+P  YRHM G+G  TF +VNK+GK  YVKFH+KPT GVK L   E+A ++  S+  ++ +DL+++I  G++P WK++IQ +  +  ++++F+P DVTK WP    PL  VG++VLN+N  N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT
Sbjct:  115 ESGSADTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTFKMVNKDGKAIYVKFHFKPTQGVKNL-TVEKAGQLASSDPDYSIRDLFNAIEKGDFPVWKMFIQVMTFEQAEKWEFNPFDVTKVWPHGDYPLIEVGKMVLNRNPRNYFAEVEQSAFCPAHIVPGIEFSPDKMLQGRIFSYTDT 357          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_VIBPA (Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=3 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 4.399e-69
Identity = 119/247 (48.18%), Postives = 168/247 (68.02%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            VIH +GSPETLRDPRGFA KFYT +GNWDL+GN++PVFFIRD+IKFPD++H+ KP+P +++Q+  R  DF SH P +    +W + ++G P  YR M+GFGV  +  +N+ G V+YVKF WK   G+K L    +  ++ G + +H T DLY +I  GNYP+W LY++ + P+   + D++ LD TK W    +P + VG + LN+  +NFF E E  AF P  ++PGI  S D++LQ R+FAY DT
Sbjct:  113 VIHSKGSPETLRDPRGFATKFYTEQGNWDLVGNNLPVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFFDFFSHEPSATHMLTWVYSNLGTPASYRTMDGFGVHAYKWINQQGDVNYVKFQWKSQQGIKSL-RPNKVTEMQGKDFNHLTNDLYAAIGRGNYPKWDLYVKVLSPEALSKLDYNGLDATKVWLN--VPDRKVGTMTLNRLPENFFLETEQSAFAPSNLIPGIEPSEDRLLQGRLFAYADT 356          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 260.381 bits (664), Expect = 7.503e-69
Identity = 129/247 (52.23%), Postives = 168/247 (68.02%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   S+ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   E+A ++   +  +  +DL+++IA GNYP W LYIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E LAF+P  + PGI  S DKMLQ R+FAY DT
Sbjct:  116 VAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-SVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYIQVMTFSEAEIFPFNPFDLTKVWPHGDYPLIPVGKLVLNRNPVNYFAEVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDT 361          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.280e-68
Identity = 130/250 (52.00%), Postives = 171/250 (68.40%), Query Frame = 3
Query:   15 RGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI-------QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            RGS +T+RD RGFAVKFYT EGN+DL+GN++PVFFI+DAIKFPD +HA KP P + I         +W   DF S +PES     W   D  IP+  R MEGFGV TF L+N  G   +VKFHWKP  GV  L+ DE A K+ G +     +DL+++I  G+YPEW+L +Q +    E +FDFD LD TK  PE+++P+ P+G++VLN+N DNFFAE E +AF PG +VPGI ++ND +LQ R+F+Y DT
Sbjct:  137 RGSGDTVRDVRGFAVKFYTDEGNFDLVGNNMPVFFIQDAIKFPDFVHAVKPEPHNEIPTGGSAHDTFW---DFVSLVPESAHMVMWAMSDRAIPRSLRMMEGFGVHTFRLINAEGVASFVKFHWKPRQGVHSLLWDE-AQKLAGKDTDFQRRDLWEAIENGDYPEWELGVQIVPEADEHKFDFDLLDPTKIIPEELVPVTPLGKMVLNRNPDNFFAEVEQVAFCPGHIVPGIDFTNDPLLQGRLFSYTDT 382          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_DEIRA (Catalase OS=Deinococcus radiodurans GN=katA PE=1 SV=2)

HSP 1 Score: 259.61 bits (662), Expect = 1.280e-68
Identity = 122/245 (49.80%), Postives = 169/245 (68.98%), Query Frame = 3
Query:    9 HERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            H   SPETLRDPRGFAVKFYT +GNWDL+GN++ +FFIRDA+KFPD+IH+ KP+P ++IQ   RI DF +  PE+    +  +   GIP  YR M+G GV T+  VN  G+   VK+HW+P  GV+ L    +A +V  +N +HATQDL+D+I  G++P+W L++Q ++     + DFDPLD TK WP +  P + VG++ LN+N +N FAE E  AF  G++V G+ +S+DKMLQ R F+Y DT
Sbjct:  129 HGTHSPETLRDPRGFAVKFYTEDGNWDLVGNNLKIFFIRDALKFPDLIHSQKPSPTTNIQSQERIFDFFAGSPEATHMITLLYSPWGIPASYRFMQGSGVNTYKWVNDQGEGVLVKYHWEPVQGVRNL-TQMQADEVQATNFNHATQDLHDAIERGDFPQWDLFVQIMEDGEHPELDFDPLDDTKIWPREQFPWRHVGQMTLNRNPENVFAETEQAAFGTGVLVDGLDFSDDKMLQGRTFSYSDT 372          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA2_CAEEL (Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2 SV=3)

HSP 1 Score: 259.61 bits (662), Expect = 1.280e-68
Identity = 123/247 (49.80%), Postives = 172/247 (69.64%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V  E GS +T+RDPRGF++KFYT EGNWDL+GN+ P+FFIRDAI FP+ IHA K NP++H+++   + DF  + PES+    + + D GIP  +R M G+G  TF +VNK G   Y KFH+KP  G K L D  +A K+  S+  +A +DL+++I + N+PEWK++IQ +  +  ++++F+P DVTK WP    PL  VG++VLN+N+ N+FAE E  AF P  +VPGI +S DKMLQ RIF+Y DT
Sbjct:  112 VAGESGSADTVRDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAHTFKMVNKEGNPIYCKFHFKPAQGSKNL-DPTDAGKLASSDPDYAIRDLFNAIESRNFPEWKMFIQVMTFEQAEKWEFNPFDVTKVWPHGDYPLIEVGKMVLNRNVKNYFAEVEQAAFCPAHIVPGIEFSPDKMLQGRIFSYTDT 357          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_ASPFU (Catalase A OS=Aspergillus fumigatus GN=catA PE=3 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 2.183e-68
Identity = 126/250 (50.40%), Postives = 167/250 (66.80%), Query Frame = 3
Query:   15 RGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE-------YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            RGS +T+RD RGFAVKFYT EGNWD++GN+IPVFFI+DA+KFPD +HA KP P + + +       +W   DF    PE+   F W   D  IP+ YR M+GFGV TF LVNK GK H+VKFHW P  GV  L+ DE A+K+GG +     +DL ++I    YP+W   IQ I  + +D F+FD LD TK WPED++PL+ +G L LN+N+D FF + E +AF    +VPGI +++D +LQ R F+Y DT
Sbjct:  138 RGSADTVRDVRGFAVKFYTDEGNWDIVGNNIPVFFIQDAVKFPDFVHAVKPEPHNEVPQAQTAHNNFW---DFVYLHPEATHMFMWAMSDRAIPRSYRMMQGFGVNTFALVNKEGKRHFVKFHWIPHLGVHSLVWDE-ALKLGGQDPDFHRKDLMEAIDNKAYPKWDFAIQVIPEEKQDDFEFDILDATKIWPEDLVPLRVIGELELNRNVDEFFPQTEQVAFCTSHIVPGIDFTDDPLLQGRNFSYFDT 383          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_RAT (Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3)

HSP 1 Score: 257.684 bits (657), Expect = 4.863e-68
Identity = 127/247 (51.42%), Postives = 168/247 (68.02%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V  E GS +T+RDPRGFAVKFYT +GNWDL+GN+ P+FFIRDA+ FP  IH+ K NP++H+++   + DF S  PESL   ++ F D GIP  +RHM G+G  TF LVN NG+  Y KFH+K   G+K L   EEA ++   +  +  +DL+++IA+GNYP W  YIQ +     + F F+P D+TK WP    PL PVG+LVLN+N  N+FAE E +AF+P  + PGI  S DKMLQ R+FAY DT
Sbjct:  116 VAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDAMLFPSFIHSQKRNPQTHLKDPDMVWDFWSLCPESLHQVTFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNL-PVEEAGRLAQEDPDYGLRDLFNAIASGNYPSWTFYIQVMTFKEAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPANYFAEVEQMAFDPSNMPPGIEPSPDKMLQGRLFAYPDT 361          
The following BLAST results are available for this feature:
BLAST of CX671534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_VIBVU4.700e-7150.20Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3 SV=... [more]
CATA_VIBVY6.138e-7150.20Catalase OS=Vibrio vulnificus (strain YJ016) GN=VV... [more]
CATA1_CAEEL1.158e-6951.64Peroxisomal catalase 1 OS=Caenorhabditis elegans G... [more]
CATA_VIBPA4.399e-6948.18Catalase OS=Vibrio parahaemolyticus GN=VPA0305 PE=... [more]
CATA_BOVIN7.503e-6952.23Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
CATE_PSEPU1.280e-6852.00Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_DEIRA1.280e-6849.80Catalase OS=Deinococcus radiodurans GN=katA PE=1 S... [more]
CATA2_CAEEL1.280e-6849.80Catalase-2 OS=Caenorhabditis elegans GN=ctl-1 PE=2... [more]
CATA_ASPFU2.183e-6850.40Catalase A OS=Aspergillus fumigatus GN=catA PE=3 S... [more]
CATA_RAT4.863e-6851.42Catalase OS=Rattus norvegicus GN=Cat PE=1 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_11F06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F06-L11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671534 ID=CX671534; Name=CX671534; organism=Citrus sinensis; type=EST; length=743bp
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAAGGCT
TCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGCACTAT
GTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATGA
TGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAGG
ATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTAC
ATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACT
GGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTG
GACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAA
ATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAA
TGATAAGATGCTCCAATGCCGAATCTTTGCCTATGGTGATACC
back to top