CX671534

Overview
NameCX671534
Unique NameCX671534
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5392 contig Csv1_Contig5392:387..1129. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_STRCO (Catalase OS=Streptomyces coelicolor GN=katA PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.790e-62
Identity = 120/241 (49.79%), Postives = 153/241 (63.49%), Query Frame = 3
Query:   18 GSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGD 740
            G  + +RDPRGFA+KFYT EGN+DL+GN+ PVFFI+D IKFPD IH+ K +P +  QE   + DF +H PE+    +W   D GIP  YRHM+GFG  T+   N  G+  +VK+H+K   G++CL  DE A   G    SH T DL  +I  G YP W L++Q +       + F+P DVTK WP    PL+ VGRLVL++N DN FAE E  AF+P   VPGI  S DKMLQ R+FAY D
Sbjct:  100 GGADAVRDPRGFALKFYTEEGNYDLVGNNTPVFFIKDPIKFPDFIHSQKRDPFTGRQEPDNVFDFWAHSPEATHQITWLMGDRGIPASYRHMDGFGSHTYQWTNARGESFFVKYHFKTDQGIRCLTADEAAKLAGEDPTSHQT-DLVQAIERGVYPSWTLHVQLMPVAEAANYRFNPFDVTKVWPHADYPLKRVGRLVLDRNPDNVFAEVEQAAFSPNNFVPGIGPSPDKMLQGRLFAYAD 339          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.208e-62
Identity = 117/247 (47.37%), Postives = 163/247 (65.99%), Query Frame = 3
Query:   15 RGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHI----QEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            RGS +T+RD  GFAVKFYT EGN+DL+GN++PVFFI+DA  FPD +HA K  P++ +      +    DFC   PES  +  W   D GIP   RH +GFGV ++  +N+ GK  +VK HWKP  G   L+ DE A K+ G +  +  +  ++ I +G++P+W+L  Q +D D + +FDFD LD TK  PE++ P+ P+GR+V+++N DNFFAE E +AF    VVPGI +SND +LQ RIF+Y DT
Sbjct:  114 RGSADTVRDVHGFAVKFYTDEGNYDLVGNNMPVFFIQDASSFPDFVHAVKMEPQNEMPTGGSAHDTFYDFCGLKPESAHSVLWVMSDRGIPISLRHQQGFGVHSYRFINQEGKSTFVKLHWKPLSGTCSLLWDE-AQKIAGKDCDYHRRRFWEDIESGDFPQWELGAQLLDEDLQKKFDFDILDPTKLIPEELTPVIPLGRMVIDRNPDNFFAETEQVAFCVSHVVPGIDFSNDPLLQGRIFSYLDT 359          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CAT3_NEUCR (Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.208e-62
Identity = 117/251 (46.61%), Postives = 163/251 (64.94%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE----YWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V   RGS +T RD  GFA +FYT EGN+D++GN+IPVFFI+DAI+FPD+IH+ KP+P + + +    +    DF S  P +L T  W     GIP+ YRHM+GFG+ TF LV ++GK   VK+HWK   G   L+  EEA  + G N     QDL+D+I +GN P W+L +Q ID D    + FD LD TK+ PE+  PLQ +G + LN+N  N+FAE E ++F PG +V G+ ++ D +LQ R+++Y DT
Sbjct:  143 VAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHWKTKQGKAALVW-EEAQVLAGKNADFHRQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFDLLDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVRGVDFTEDPLLQGRLYSYLDT 392          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.802e-62
Identity = 116/243 (47.74%), Postives = 161/243 (66.26%), Query Frame = 3
Query:   12 ERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGD 740
            ERGS +T RDPRGFA+KFYT EGNWD++GN+ PVFFIRD +KFPD IH  K  P+S+++    + DF SH PE+L   +  F D GIP  YRHM GFG  T++L+N  G+ H+VK+H+K   G+K L    +A ++ G++  +A +DL+ +I  G++P+W++ IQ +     +    +P DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D
Sbjct:   99 ERGSADTERDPRGFALKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQSNLKSAQMMWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAKGERHWVKWHYKTKQGIKNLA-PADAARLAGTDPDYAQRDLFGAIERGDFPKWRVCIQIMTEAQANAHYENPFDVTKTWSQKEFPLIEVGELELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYAD 340          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_BORPE (Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.515e-61
Identity = 121/247 (48.99%), Postives = 154/247 (62.35%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH  K +PK++++      DF S  PESL   +    D G+PQ+YR   GFG  T++ VN  G+  YVKFH+K   G+ C  D E A  VG    S A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT
Sbjct:   98 VAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRES-AQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDT 343          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_BORPA (Catalase OS=Bordetella parapertussis GN=katA PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.515e-61
Identity = 121/247 (48.99%), Postives = 154/247 (62.35%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH  K +PK++++      DF S  PESL   +    D G+PQ+YR   GFG  T++ VN  G+  YVKFH+K   G+ C  D E A  VG    S A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT
Sbjct:   98 VAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRES-AQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDT 343          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_BORBR (Catalase OS=Bordetella bronchiseptica GN=katA PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.515e-61
Identity = 121/247 (48.99%), Postives = 154/247 (62.35%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDT 743
            V  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFFIRD +KFPD IH  K +PK++++      DF S  PESL   +    D G+PQ+YR   GFG  T++ VN  G+  YVKFH+K   G+ C  D E A  VG    S A +DL+ +I  G +P W L +Q +       +  +P D+TK WP    PL  VG L LNKN +N+FAE E  AF P  VVPGI +S DKMLQ R+F+YGDT
Sbjct:   98 VAGERGAADAERDVRGFAIKFYTDEGNWDLVGNNTPVFFIRDPLKFPDFIHTQKRDPKTNLRNATAAWDFWSLNPESLHQVTILMSDRGLPQNYRQQHGFGSHTYSFVNDAGERFYVKFHFKSQQGIACYTDGEAAELVGRDRES-AQRDLFQNIEQGQFPRWTLKVQVMPEAEAATYHINPFDLTKVWPHADYPLIEVGVLELNKNPENYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGDT 343          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.979e-61
Identity = 113/246 (45.93%), Postives = 162/246 (65.85%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGD 740
            V  ERG+ +  RD RGF+++FYT +GNWDL+GN+ PVF++RD +KFPD+ H  K +P+++++      DF SHLPESL   +  F D G+P+ YRH+ GFG  TF+ +N N +  +VKFH+K   G++ L  + EA +V   +   + +DLY+SI  G++P WK+Y+Q +       + ++P D+TK WP    PL  VG   LN+N DN+FAE E  AF P  VVPGI +S DKMLQ R+F+YGD
Sbjct:   96 VAGERGAADAERDIRGFSMRFYTEQGNWDLVGNNTPVFYLRDPLKFPDLNHVVKRDPRTNLRNATFKWDFFSHLPESLHQLTIDFSDRGLPKSYRHIHGFGSHTFSFINANNERFWVKFHFKTQQGIENL-TNAEAAEVIAQDRESSQRDLYESIEKGDFPRWKMYVQIMPEKEAATYRYNPFDLTKVWPHGDYPLIEVGFFELNRNPDNYFAEVEQAAFTPANVVPGIGFSPDKMLQGRLFSYGD 340          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.979e-61
Identity = 113/246 (45.93%), Postives = 157/246 (63.82%), Query Frame = 3
Query:    3 VIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGD 740
            V  E G+ +  RD RGFA+KFYT+EGNWDL+GN+ P FFIRDA KFPD IH  K +P++H++      DF S  PESL   +    D GIP  YRHM GFG  T++ +N   +  +VKFH+K   G+K L + E A  +     SH  +DLY++I   ++P+WK+ +Q +     ++  F+P D+TK WP  ++PL  +G ++LNKN  N+F E E  AF+P  +VPGI +S DKMLQ RIF+Y D
Sbjct:   92 VAGEAGAADAERDVRGFAIKFYTKEGNWDLVGNNTPTFFIRDAYKFPDFIHTQKRDPRTHLRSNNAAWDFWSLCPESLHQVTILMRDRGIPASYRHMHGFGSHTYSFINDKNERFWVKFHFKTQQGIKNLTNQEAAELIAKDRESH-QRDLYNAIENKDFPKWKVQVQILAEKDIEKLGFNPFDLTKIWPHSLVPLMDIGEMILNKNPQNYFNEVEQAAFSPSNIVPGIGFSPDKMLQARIFSYPD 336          
BLAST of CX671534 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.521e-61
Identity = 117/243 (48.15%), Postives = 158/243 (65.02%), Query Frame = 3
Query:   12 ERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFFDDVGIPQDYRHMEGFGVQTFTLVNKNGKVHYVKFHWKPTCGVKCLIDDEEAVKVGGSNHSHATQDLYDSIAAGNYPEWKLYIQTIDPDHEDQFDFDPLDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGD 740
            ERGS +T RDPRGFAVKFYT EGNWD++GN+ PVFFIRD +KFPD IH  K +P+S+++      D  SH PE+L   +  F D GIP  YRHM GFG  T++L+N  G+  +VK+H+K   G+K L    +A ++ G++  +A +DL+++I  G+YP W + IQ +        D +P DVTK W +   PL  VG L LN+N  N+FAE E  AF P  +VPG+  S D+MLQ R+FAY D
Sbjct:   97 ERGSADTERDPRGFAVKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRHPQSNLKNAQIFWDSWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLINAQGERTWVKWHFKTQQGIKNLA-PADAARLAGTDPDYAQRDLFEAIERGDYPRWTVCIQVMSEAEAASRDENPFDVTKTWSQKDYPLIEVGVLELNRNPLNYFAEVEQAAFGPSNMVPGVGLSPDRMLQGRVFAYAD 338          
The following BLAST results are available for this feature:
BLAST of CX671534 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CATA_STRCO1.790e-6249.79Catalase OS=Streptomyces coelicolor GN=katA PE=3 S... [more]
CATB_DICDI5.208e-6247.37Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CAT3_NEUCR5.208e-6246.61Catalase-3 OS=Neurospora crassa GN=cat-3 PE=1 SV=1[more]
CATA_ONCVE6.802e-6247.74Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATA_BORPE1.515e-6148.99Catalase OS=Bordetella pertussis GN=katA PE=1 SV=1[more]
CATA_BORPA1.515e-6148.99Catalase OS=Bordetella parapertussis GN=katA PE=3 ... [more]
CATA_BORBR1.515e-6148.99Catalase OS=Bordetella bronchiseptica GN=katA PE=3... [more]
CATA_PSEAE1.979e-6145.93Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]
CATA_CAMJE1.979e-6145.93Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]
CATA_PSEPU7.521e-6148.15Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_11F06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F06-L11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671534 ID=CX671534; Name=CX671534; organism=Citrus sinensis; type=EST; length=743bp
CTGTTATCCATGAGCGGGGCAGCCCTGAGACACTCAGGGATCCTCGAGGA
TTTGCAGTCAAGTTTTACACCAGAGAGGGTAATTGGGATCTTCTGGGTAA
CAGTATCCCTGTTTTTTTCATCCGTGATGCAATCAAATTCCCAGATGTGA
TCCATGCTTTTAAACCTAATCCAAAGTCTCACATCCAAGAGTACTGGAGG
ATCCTCGACTTCTGCTCCCACCTTCCTGAAAGCTTGTCCACATTTTCCTG
GTTCTTTGATGATGTGGGTATTCCACAAGATTACAGGCACATGGAAGGCT
TCGGTGTTCAAACTTTTACACTGGTCAATAAGAATGGGAAAGTGCACTAT
GTGAAATTCCACTGGAAACCAACTTGTGGAGTTAAGTGTTTGATAGATGA
TGAAGAAGCAGTAAAGGTTGGTGGATCTAATCACAGCCACGCTACTCAGG
ATCTCTACGACTCAATTGCAGCTGGAAACTATCCTGAGTGGAAACTCTAC
ATTCAGACTATTGATCCCGATCACGAGGACCAATTTGACTTTGACCCACT
GGACGTAACCAAGTGGTGGCCTGAGGACATCATCCCTCTGCAGCCAGTTG
GACGCTTGGTCTTGAACAAGAACATCGATAATTTCTTTGCGGAAAATGAA
ATGCTTGCATTTAACCCTGGTATCGTGGTTCCTGGGATCTACTACTCAAA
TGATAAGATGCTCCAATGCCGAATCTTTGCCTATGGTGATACC
back to top