CX671533

Overview
NameCX671533
Unique NameCX671533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length705
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671533 vs. ExPASy Swiss-Prot
Match: CATA_PSEPU (Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 44/160 (27.50%), Postives = 79/160 (49.38%), Query Frame = -3
Query:  230 PGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREK-ACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNV 703
            PG+  S D+MLQ R+FAY D  R+R+G N+  LPVNAP+CP  +   DG M         +Y P+ Y    + + R+  P+  + G  ++    E  + +   G  +R  + +++   ++     +    V+  V    + Y+ +AD + G+ +A  L +
Sbjct:  319 PGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRCPVNSYQRDGSMATGSYGSAPNYEPNSYAAAPKQSPRHAEPALALNGSADRYDHREDADYYSHAGALFRLMSDEQKALLISNIAGTMAG--VSENVIQRQLQYFFKADPAYGEGIAKGLGI 476          
BLAST of CX671533 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = -3
Query:  479 PGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP-KCPHRNNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAER 703
            PG+  S DKML  R+F+Y DT RHRLGPNYL +PVN P K    N   DG MN   ++D   +YFP+ ++  +   R
Sbjct:  339 PGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFNGPQECPR 415          
BLAST of CX671533 vs. ExPASy Swiss-Prot
Match: CATA_BOVIN (Catalase OS=Bos taurus GN=CAT PE=1 SV=3)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 45/129 (34.88%), Postives = 63/129 (48.84%), Query Frame = -3
Query:  332 PGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHR----NNHYDGFMNFM-HRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKAL 703
            PGI  S DKMLQ R+FAY DT RHRLGPNYL +PVN   CP+R    N   DG M  M ++    +Y+P+ +    H               + + +E   +F    +R+ S   D   +    ++K L
Sbjct:  341 PGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVN---CPYRARVANYQRDGPMCMMDNQGGAPNYYPNSFSAPEH---------------QPSALEHRTHFSGDVQRFNSANDDNVTQVRTFYLKVL 451          
BLAST of CX671533 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 46/156 (29.49%), Postives = 72/156 (46.15%), Query Frame = -3
Query:  248 PGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNH-YDGFMNFMHRDEEVDYFPSRYDPTRHAER---YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKL 703
            PGI  S DKMLQ R+FAYGD  R+R+G N   LPVN P       H  DGF+         +Y P+ +      +R    P P   +TG        ++++F Q G+ YR  + D + R ++  +          ++    +  + +AD   G++L
Sbjct:  320 PGIGPSPDKMLQGRLFAYGDAHRYRVGINADHLPVNRPHATEARTHSRDGFLYDGRHKGAKNYEPNSFGGPVQTDRPLWQPTPVTGVTGDHAAPSHAEDDDFTQAGDLYRLMSEDEKGRLIDN-LSGFIAKVSRDDIAERAIGNFRRADEDFGKRL 474          
BLAST of CX671533 vs. ExPASy Swiss-Prot
Match: CATA_CAMJE (Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 40/120 (33.33%), Postives = 64/120 (53.33%), Query Frame = -3
Query:  350 PGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNF-MHRDEEVDYFPSRYDPT-RHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLN 703
            PGI +S DKMLQ RIF+Y D QR+R+G NY +LPVN  K      +  G MNF  ++++   Y P+ YD + +  + Y  P  V+ G  ++      + + QP   +     D++ +  +
Sbjct:  317 PGIGFSPDKMLQARIFSYPDAQRYRIGTNYHLLPVNRAKSEVNTYNVAGAMNFDSYKNDAAYYEPNSYDNSPKEDKSYLEPDLVLEGVAQRYAPLDNDFYTQPRALFNLMNDDQKTQLFH 436          
The following BLAST results are available for this feature:
BLAST of CX671533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
CATA_PSEPU2.241e-1127.50Catalase OS=Pseudomonas putida GN=katA PE=3 SV=1[more]
CATA_DROME3.823e-1146.75Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATA_BOVIN6.521e-1134.88Catalase OS=Bos taurus GN=CAT PE=1 SV=3[more]
BCA_STRVL6.521e-1129.49Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATA_CAMJE8.517e-1133.33Catalase OS=Campylobacter jejuni GN=katA PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11F06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11F06-L11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671533 ID=CX671533; Name=CX671533; organism=Citrus sinensis; type=EST; length=705bp
TTTTTTTTTTTTTTTTTGAACTTCATAAAACAGACTTTTATTAATTGAAA
CAACAGGAAAAGAGTCACATAACATGCAAGTTTATTTTCTATATTACAAT
ATACAACAGCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGG
TGTTCACTCCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAG
TTCAAGTGACACCTTCAAATGCTTGGCCTCACATTGAGACGAGAAGCTAG
CTTCTGACCCAGAGATCTGTCGGCCTGAGACCAGTAAGAGACCCATATGC
TGCGAACCTCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGA
TTAAGGAACCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCC
AGGCTGCTTGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTC
CTGTAATTACATCAGAAGGAATGGGATATCTCTCAGCATGACGAGTAGGA
TCATACCTCGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATT
CATGAAACCATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATTAA
CTGGAAGCATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCA
TAGGCAAAGATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCC
AGGAA
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