CX671523

Overview
NameCX671523
Unique NameCX671523
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671523 vs. ExPASy Swiss-Prot
Match: S23A3_HUMAN (Solute carrier family 23 member 3 OS=Homo sapiens GN=SLC23A3 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12
Identity = 51/196 (26.02%), Postives = 91/196 (46.43%), Query Frame = 1 
Query:  262 PWPQALLLAFQHYIVMLG----TTVLISSTLVPLMGGGHGDKGRVIQSLLFMSGLNTLLQTLFGTRLPTVMGPSAAFTLPVL-----------------SIINDYNDGSFTSEHDRFRHTIRTIQGSLIVSSFINIVLGYSGAWGNLARFFSPIVIVPFVCVVGLGLFMRGFPLLGNCVEIGLPMLVLLVICQQYL 786
            PW  + LLA QH +VM      + +L+  +L P  GG      +++ S  F  G++T+LQT  G+RLP V  PS  F +P L                 S++     G        +  +++ + G+++VS  +  ++G  G+ G++     P+V+ P + V GL               + L +++L+V+C Q+L
Sbjct:   44 PWGLSCLLALQHVLVMASLLCVSHLLLLCSLSP--GGLSYSPSQLLASSFFSCGMSTILQTWMGSRLPLVQAPSLEFLIPALVLTSQKLPRAIQTPGNSSLMLHLCRGPSCHGLGHWNTSLQEVSGAVVVSGLLQGMMGLLGSPGHVFPHCGPLVLAPSLVVAGLSAHREVAQFCFTHWGLALLVILLMVVCSQHL 237
The following BLAST results are available for this feature:
BLAST of CX671523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
S23A3_HUMAN4.222e-1226.02Solute carrier family 23 member 3 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11E12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11E12-J23-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671523 ID=CX671523; Name=CX671523; organism=Citrus sinensis; type=EST; length=794bp
CTTTTGCTTTCTATCTTCCAGCTTCCAGCTTCAAGAAGAATAACAAATAC
GCTCGTTTTATTTCTCTGTAAAAGGAGGAAAATAATAACAAAGAGAGAGA
GGGAGAGATAGTAGTTAGAAGAAGAAATGGGGGAAACGGCCGGCCACCAC
CCGCCTCCACCACCGCAGGCGGCACCGCCGTCTCTTGGACTTTCAAGGGG
TCCCATTTGGACTCCAGCCGAGCAACTCCAGCAGCTTCAGTACTGCATCC
ACTCCAATCCTCCATGGCCTCAAGCGCTCTTACTAGCTTTCCAACACTAT
ATCGTAATGCTTGGAACAACAGTCTTAATTTCCAGTACACTGGTGCCTCT
AATGGGTGGGGGCCATGGTGATAAGGGGCGAGTGATTCAATCTTTGTTGT
TCATGTCGGGTCTGAATACGCTGCTTCAAACACTTTTTGGGACAAGACTT
CCTACGGTGATGGGTCCATCCGCTGCTTTCACCCTGCCAGTATTGTCAAT
CATCAATGATTACAATGACGGGAGCTTCACATCTGAGCATGATAGGTTTC
GCCACACAATCAGAACTATTCAAGGATCACTTATAGTTTCTTCGTTTATC
AACATTGTGCTTGGATATAGTGGGGCCTGGGGAAATTTAGCAAGATTCTT
TAGTCCCATTGTAATCGTACCATTTGTTTGTGTGGTTGGGCTTGGTCTGT
TCATGAGGGGCTTCCCTCTGCTTGGTAACTGCGTGGAAATCGGCCTGCCT
ATGTTGGTTCTACTGGTGATTTGTCAACAGTATTTGAAGCGCTT
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