EY664402

Overview
NameEY664402
Unique NameEY664402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.911e-31
Identity = 79/212 (37.26%), Postives = 123/212 (58.02%), Query Frame = 2
Query:   95 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA--HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICT 712
            +YD  +T +SP G LFQVEYAMEAV++G+AA+G+R    VVLG   K+  +L   +  +KI  +DDHI +A AGL AD RVL    R EC ++  T E P+ V  +   +A   Q  TQ    RP+G+  L+ G D       LY   PSG +  ++A A G  S + + +LE+   N+ E++ ++ +K A+ A+ E ++  G+ ++ ++ T
Sbjct:    3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEK---NYKETSGQETVKLAIRALLEVVESGGKNIEVAVMT 211          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2)

HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31
Identity = 78/218 (35.78%), Postives = 125/218 (57.34%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTIAVVGAGEP 739
            YD  +T +SP GRLFQVEYA +AVK  G  +IG+R K  V +    K   +L   S    +F +  +IG+   G+TAD R L +  R++   + +TY   +PV  L   +ADK+QV TQ ++ RP GV  +V G+DE+   L Y C P+G+++ ++A + G + Q A  +LE++ +     T ++ ++ A+ A++  LQ E  K++   + VV A  P
Sbjct:    9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQ-EDFKATEIEVGVVRAENP 225          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.108e-31
Identity = 79/221 (35.75%), Postives = 122/221 (55.20%), Query Frame = 2
Query:   83 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTIAVVGAG 733
            M   +YD+  T +SP GRL+QVEYA+E++     AIG+ +   +VL    K  S L    +  +K++K++D I VA+AGLTAD  +L    R    NY  TY   +PV  LV +L+D  Q  TQ    RP+GV  + AG D++ G  LY + PSGNY  ++A ++G+ + AA+T L+  +++  +   +D I+ AL  + +T     L       A +  G
Sbjct:    1 MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD--DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKG 219          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.713e-31
Identity = 80/209 (38.28%), Postives = 115/209 (55.02%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTI 715
            YD  +T +SP GRL+QVEYA EAV++G+ AIG+  K  VVL    +  S+L   +  +KIF++DDH+  A +GL AD RVL    R E   Y  TY   + +  L  ++ D  Q  TQ    RP+GV LL+AG+D+  A L+   PSG   EY+A AIGS        LE+ + ++ +     +L   AL    E ++ E +   I T+
Sbjct:    9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPENVDVCIITV 217          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.486e-30
Identity = 76/198 (38.38%), Postives = 115/198 (58.08%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 682
            YD  +T +SP G LFQVEYA EAVK+GS A+G+R K  VVLG   K+ ++L   +  +KI  +DD++ +A AGLTAD R++    R EC ++  T E P+ V  +   +A   Q  TQ   +RP+G+  L+ G D  G   LY   PSG Y  ++A AIG  +++ +   E+ + + +  T +  IK  + A+ E +Q
Sbjct:    3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQ 200          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.941e-30
Identity = 87/214 (40.65%), Postives = 118/214 (55.14%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTIAVVGA 730
            YD  +T +SP GRLFQVEYA EAVK+GS A+GL+    V+L    K  S+L      +KI  +DD++    +GL AD RVL  + R        TY S + +  LV ++AD+ Q  TQ    RPYGV L+ AG+D+ G  L+   P+G   EY+A AIGS   A  ++LE+ + E  SE     L   AL A  E  +GE LK+       VG+
Sbjct:    8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLE--EGEELKAPEIASITVGS 219          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.941e-30
Identity = 82/206 (39.81%), Postives = 114/206 (55.34%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSI 706
            YD  +T +SP GRL+QVEYA EAV++G+ A+G++ K  VVL    +  S+L   S  +KIF++DDHI  A +GL AD RVL    R E      +Y   + V  L  ++ D  Q  TQ    RP+G+ LL+ G+D   A L+   PSG   EY+A AIGS    A   LE ++ EN + S   +L   AL    E L+ E +  +I
Sbjct:   10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTEELKPENIDMAI 215          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.941e-30
Identity = 75/219 (34.25%), Postives = 123/219 (56.16%), Query Frame = 2
Query:   92 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTIAVVGAGEP 739
            ++YD  VT +SP G L QVEYA EAV++GS A+G+R    VVLG   K+ ++L   +K  KI  +D+H+ +A AGLTAD R++    + EC ++    E P+ +  +   +A   Q  TQ + +RP+G+  L+ G D  G AHL+   PSG ++EY+A A G  ++  + + E+ +     +     +K A+ A+ E  Q      +   +A++  G+P
Sbjct:    3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQS---GQNNLEVAIMENGKP 218          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.941e-30
Identity = 78/218 (35.78%), Postives = 126/218 (57.80%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTIAVVGAGEP 739
            YD  +T +SP GRLFQVEYA +AVK  G  +IG+R K  V +    K   +L   +    +F +  ++G+   G+TAD R L +  R+E   + + Y   +PV  L   +ADK+QV TQ ++ RP GV  ++ G+D EKG  L+   P+G++F ++A + GS+ Q A  +LE++ +N    + E+ ++ A+ A++  LQ E  K+S   + VV   +P
Sbjct:    9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQ-EDFKASEIEVGVVKKEDP 225          
BLAST of EY664402 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.535e-30
Identity = 86/227 (37.89%), Postives = 121/227 (53.30%), Query Frame = 2
Query:   98 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTIAVVGAGEPFIF*IKKLYK 769
            YD  +T +SP GRL+QVEYA EAV++G+ A+G++ K  VVL    +  S+L   S  +KIF++DDHI  A +GL AD RVL    R E      +Y   + V  L  ++ D  Q  T     RP+G+ LL+ G+D   A L+   PSG   EY+A AIGS    A   LE ++ EN S S   +L   AL    E L+ E +  +I         +  +F I+K+ K
Sbjct:   10 YDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTEELKPENIDMAIVKDTGKLVEKITVFEIEKIVK 236          
The following BLAST results are available for this feature:
BLAST of EY664402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PSA7_SOLLC3.911e-3137.26Proteasome subunit alpha type-7 OS=Solanum lycoper... [more]
PSA6A_ARATH5.108e-3135.78Proteasome subunit alpha type-6-A OS=Arabidopsis t... [more]
PSA4_YEAST5.108e-3135.75Proteasome component Y13 OS=Saccharomyces cerevisi... [more]
PSMA_METJA8.713e-3138.28Proteasome subunit alpha OS=Methanocaldococcus jan... [more]
PSA7_CHICK1.486e-3038.38Proteasome subunit alpha type-7 OS=Gallus gallus G... [more]
PSMA_THEVO1.941e-3040.65Proteasome subunit alpha OS=Thermoplasma volcanium... [more]
PSMA_METMP1.941e-3039.81Proteasome subunit alpha OS=Methanococcus maripalu... [more]
PSA71_DROME1.941e-3034.25Proteasome subunit alpha type-7-1 OS=Drosophila me... [more]
PSA6_TOBAC1.941e-3035.78Proteasome subunit alpha type-6 OS=Nicotiana tabac... [more]
PSMA_METVS2.535e-3037.89Proteasome subunit alpha OS=Methanococcus vannieli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-066-B12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664402 ID=EY664402; Name=EY664402; organism=Citrus sinensis; type=EST; length=919bp
ACGGCCCGACCCACGCGTCCGGNTTTACTTTCAGCGTTTGTTTCATCGCG
AAATCCTACGGCACGAAAGATTAAACCCTAAAATGTTTAGGAACCAATAC
GACACCGACGTGACAACATGGAGCCCCGCGGGCCGATTATTTCAAGTGGA
GTACGCGATGGAGGCCGTCAAGCAAGGCTCCGCCGCAATTGGGCTCCGAT
CTAAGACTCACGTGGTCTTGGGCTGCGTTAACAAGGCCAACTCCGAGCTC
TCGTCTCACCAGAAGAAGATCTTCAAGGTCGACGACCACATCGGCGTCGC
TATCGCCGGTCTCACCGCCGACGGCCGTGTTCTGTCTCGGTACATGCGAT
CCGAGTGTATTAACTACAGTTACACTTACGAGTCGCCGCTTCCTGTCGGC
CGCCTTGTTGTCCAGCTCGCTGACAAGGCTCAGGTCTGTACCCAGCGCTC
ATGGAAACGGCCATATGGTGTTGGCCTGCTGGTTGCTGGCTTGGATGAAA
AAGGAGCCCACCTTTATTATAACTGCCCAAGTGGGAACTATTTTGAGTAT
CAAGCATTTGCCATTGGGTCCCGATCTCAAGCTGCAAAGACATACTTGGA
ACGCAGGTTTGAGAACTTTTCAGAATCTACAAGAGAAGATCTGATCAAGG
ACGCTCTCATGGCAATAAGGGAAACCTTACAAGGAGAAACACTAAAGAGT
TCTATTTGCACAATTGCTGTGGTAGGAGCTGGGGAGCCATTTATATTTTA
GATCAAGAAACTGTACAAAAGTTAATTGATTCATTTGACATTGCTTGCAC
TGAANAGGGTCCTGCTGCTGCACCANATAGTGCTGCAAAANGAGGCAGTG
CTGCATAAGGAGGCGCAACTTCTATACAGTTGCTTCANCAGACCAGGGGG
AACTCCCATGAAATTTGAG
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