CX671520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_SYNJB (30S ribosomal protein S9 OS=Synechococcus sp. GN=rpsI PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.545e-35 Identity = 79/125 (63.20%), Postives = 88/125 (70.40%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK A+ARV L GTGK IIN R +YLQ L +K PL LG E SYD+ V+AHGGG+ GQA AI LGVARAL +V +R PLK EG L RD R VERKK GL KARKAPQYSKR Sbjct: 12 WGTGRRKTAVARVRLVPGTGKIIINDRPGDQYLQYQEALLASVKGPLEILGLENSYDILVRAHGGGVHGQADAIKLGVARALCEVDPANRGPLKVEGYLKRDPRAVERKKYGLRKARKAPQYSKR 136
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_CYAP7 (30S ribosomal protein S9 OS=Cyanothece sp. (strain PCC 7424) GN=rpsI PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.116e-34 Identity = 75/125 (60.00%), Postives = 90/125 (72.00%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK ++ARV L GTG+ +N + Y +LQ IK PL TLG E YD+ VKAHGGGL+GQA A+ LGVARAL +++ ++R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 13 WGTGRRKTSVARVRLIPGTGQVTVNGKPGDTYFNRIADYLQGIKAPLETLGLENEYDILVKAHGGGLTGQADAVKLGVARALCELAPENRQPLKSEGYLTRDPRAKERKKYGLHKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RR9_MESVI (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride GN=rps9 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.457e-34 Identity = 78/124 (62.90%), Postives = 90/124 (72.58%), Query Frame = -3 Query: 197 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 568 GTGRRK A+ARV L G G+ IIN YLQ N +L ++ PL TLG E +YD+ VKA GGGL+GQA+AI LGVARAL + +R PLKKEG LTRDSRV ERKK GL KARKAPQ+SKR Sbjct: 14 GTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIVKAVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAPQFSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_SYNY3 (30S ribosomal protein S9 OS=Synechocystis sp. (strain PCC 6803) GN=rpsI PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.233e-34 Identity = 74/125 (59.20%), Postives = 90/125 (72.00%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK AIARV L G G+ I+N + + Y ++Q +K PL TLG E Y++ V AHGGGL+GQA A+ LGVARAL ++S ++R PLK EG LTRD R ERKK GLHKARKAPQYSKR Sbjct: 13 WGTGRRKAAIARVRLVPGQGEVIVNGKPGEIYFNRIANYIQSLKAPLETLGLEGEYNILVNAHGGGLTGQADAVKLGVARALCQLSPENRQPLKAEGYLTRDPRAKERKKYGLHKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_CYAP4 (30S ribosomal protein S9 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rpsI PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.234e-33 Identity = 74/127 (58.27%), Postives = 88/127 (69.29%), Query Frame = -3 Query: 197 TIFGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 577 T GTGRRK ++ARV L GTG+ IN + + YLQ NP +L K PL +LG E YD+ V GGGL+GQA +I LGVARAL ++ ++R PLK EG LTRD R ERKK GL KARKAPQYSKR Sbjct: 11 TYIGTGRRKSSVARVRLVPGTGQLTINGKSGELYLQFNPTYLAIAKAPLESLGLENDYDILVNTSGGGLTGQADSIRLGVARALCQLDPENRKPLKVEGYLTRDPRAKERKKYGLRKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_PROM4 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9211) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.997e-33 Identity = 74/125 (59.20%), Postives = 87/125 (69.60%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK ++ARV L GTGK IN R YL NP +L +K PL TLG SYDV V +GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 13 WGTGRRKTSVARVRLIPGTGKITINGRPGDHYLNFNPAYLAAVKAPLQTLGLSDSYDVLVNVYGGGLTGQADAIKQGAARALCELSADNRKPLKIEGHLSRDPRAKERRKYGLKKARKAPQFSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RR9_GRATL (30S ribosomal protein S9, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rps9 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.997e-33 Identity = 73/124 (58.87%), Postives = 90/124 (72.58%), Query Frame = -3 Query: 197 GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 568 GTGRRK +IARV L G+GK IIN + YLQ +P +L+ PL LG YD++VK GGGL+GQA AI LG+ARAL +++ D+R+ LK EG LTRD+R+ ERKK GL KARKAPQYSKR Sbjct: 14 GTGRRKTSIARVKLVPGSGKLIINGLPGESYLQFSPNYLRVSYSPLKILGLNKEYDIYVKTEGGGLTGQANAIRLGLARALCRMNPDNRTTLKAEGFLTRDARIKERKKYGLRKARKAPQYSKR 137
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_PROM9 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9312) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.044e-32 Identity = 74/125 (59.20%), Postives = 87/125 (69.60%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK ++ARV L G G+ IN R +YL NPL L IK PL TLG E SYD+ V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 12 WGTGRRKTSVARVRLIPGNGQIKINGRSGDDYLNFNPLHLNSIKAPLQTLGLENSYDILVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_PROM3 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9303) GN=rpsI PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.044e-32 Identity = 73/125 (58.40%), Postives = 85/125 (68.00%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK ++ARV L GTG IN R YL NP +L +K PL TLG YDV V HGGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 11 WGTGRRKTSVARVRLVPGTGTITINGRPGDHYLNFNPAYLAAVKAPLQTLGLNEQYDVLVNVHGGGLTGQADAIKQGAARALCELSADNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 135
BLAST of CX671520 vs. ExPASy Swiss-Prot
Match: RS9_PROM2 (30S ribosomal protein S9 OS=Prochlorococcus marinus (strain MIT 9215) GN=rpsI PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.782e-32 Identity = 73/125 (58.40%), Postives = 86/125 (68.80%), Query Frame = -3 Query: 197 FGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIKVPLVTLGYETSYDVFVKAHGGGLSGQAQAITLGVARALLKVSQDHRSPLKKEGLLTRDSRVVERKKAGLHKARKAPQYSKR 571 +GTGRRK ++ARV L G G IN R +YL NPL L +K PL TLG E SYD+ V GGGL+GQA AI G ARAL ++S D+R PLK EG L+RD R ER+K GL KARKAPQ+SKR Sbjct: 12 WGTGRRKTSVARVRLIPGNGLITINGRSGDDYLNFNPLHLNSVKAPLQTLGLENSYDILVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR 136 The following BLAST results are available for this feature:
BLAST of CX671520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671520 ID=CX671520; Name=CX671520; organism=Citrus sinensis; type=EST; length=831bpback to top |