CX671503

Overview
NameCX671503
Unique NameCX671503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40
Identity = 73/121 (60.33%), Postives = 92/121 (76.03%), Query Frame = -3
Query:  265 LLIILVLCMQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 627
            LL+ L         FAL+SGVG W+AV+ E  MTFGL+Y  YAT +DPK+G +GTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPALV W W +HWVYW+GP +G GLAG++YE+  I
Sbjct:  124 LLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFVGAGLAGLLYEYLVI 244          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 4.164e-40
Identity = 77/115 (66.96%), Postives = 92/115 (80.00%), Query Frame = -3
Query:  229 SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 573
            SGVGA+  VV EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S  + N W+YWVGPL+GGGLAG+VY + ++   H  + ++E+
Sbjct:  134 SGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVASSEF 248          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.276e-40
Identity = 75/125 (60.00%), Postives = 93/125 (74.40%), Query Frame = -3
Query:  229 FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI------NQSHEQLPTTEY 585
            FAL+SGVG  +AV+ E VMTFG VY  YAT +DPK+G LGTIAP+A+GF++GAN+LAGG FDGA MNPA  FGPALV W W +HWVYW+GP +G GLAG+VYE+  I        +H+ L   +Y
Sbjct:  142 FALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWRWRHHWVYWLGPFLGAGLAGLVYEYLLIPPADAVPHTHQPLAPEDY 266          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.699e-39
Identity = 76/125 (60.80%), Postives = 93/125 (74.40%), Query Frame = -3
Query:  265 LLIILVLCMQTTS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI 627
            +L  L+L + T       F L+SGVGA N +V EI++TFGLVY VY+T +DPK+GSLG IAP+AIG IVGANIL GG F GASMNPA +FGPALV W W +HW+YWVGP IG  LA ++YE+  I
Sbjct:  123 ILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHDHWIYWVGPFIGSALAALIYEYMVI 247          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 2.699e-39
Identity = 82/132 (62.12%), Postives = 98/132 (74.24%), Query Frame = -3
Query:  232 LLIILVLCMQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 627
            LL++ V   ++     +++G+GA   VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+VS  +   W+YWVGPL+GG LAG++Y   FI  S+   PTTE
Sbjct:  117 LLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG-SYAPAPTTE 247          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.852e-39
Identity = 74/130 (56.92%), Postives = 95/130 (73.08%), Query Frame = -3
Query:  250 LLIILVLCMQTTS----AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 627
            +L  L+L + T       F ++SGV   + ++ EI++TF LVY VY+TA+DPK+GS+G IAP+AIG IVGANIL GG FDGASMNPA +FGPALV W W NHW+YWVGP IGG LA ++YE+  I   +E
Sbjct:  123 ILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALVGWRWSNHWIYWVGPFIGGALAALIYEYMIIPSVNE 252          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.339e-38
Identity = 82/133 (61.65%), Postives = 95/133 (71.43%), Query Frame = -3
Query:  229 LLIILVLCMQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 627
            LL+  V   +      +S G      VVFEIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ +  +  +WVYWVGPLIGGGLAG+VY   FI  S++Q+   +Y
Sbjct:  117 LLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAGNWVYWVGPLIGGGLAGLVYGDVFIGGSYQQVADQDY 249          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.749e-38
Identity = 82/132 (62.12%), Postives = 97/132 (73.48%), Query Frame = -3
Query:  232 LLIILVLCMQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 627
            LL++ V   ++     +S+G+GA   VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+VS      W+YWVGPL+GG LAG++Y   FI  S+E + T E
Sbjct:  117 LLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDLSQIWIYWVGPLVGGALAGLIYGDVFIG-SYEAVETRE 247          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.285e-38
Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = -3
Query:  229 SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 573
            +G+     VVFE+V+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ +  +  +WVYWVGPL+GGGLAG+VY   FI  S++Q+   +Y
Sbjct:  134 AGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAGNWVYWVGPLVGGGLAGLVYGDVFIGGSYQQVADQDY 248          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.897e-38
Identity = 74/138 (53.62%), Postives = 96/138 (69.57%), Query Frame = -3
Query:  229 LLIILVLCMQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFI-----NQSHEQLPTTEY 627
            L++ LV      S F +S GVG  +  + E+VMTFGL+YTVY TA+DPK+G++  IAP+AIG IVGANIL GG FDGA MNPA++FGP+LV W W  HW++WVGPL+G  LA +VYE+  I        H+ L T +Y
Sbjct:  119 LVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSLVGWQWHQHWIFWVGPLLGAALAALVYEYAVIPIEPPPHHHQPLATEDY 256          
The following BLAST results are available for this feature:
BLAST of CX671503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
TIP31_ORYSJ4.164e-4060.33Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP22_ORYSJ4.164e-4066.96Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP32_MAIZE9.276e-4060.00Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
TIP31_ARATH2.699e-3960.80Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP22_ARATH2.699e-3962.12Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP32_ARATH7.852e-3956.92Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP22_MAIZE1.339e-3861.65Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP23_ARATH1.749e-3862.12Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP21_MAIZE2.285e-3866.09Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIPA_PHAVU3.897e-3853.62Probable aquaporin TIP-type alpha OS=Phaseolus vul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11E02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11E02-J3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671503 ID=CX671503; Name=CX671503; organism=Citrus sinensis; type=EST; length=860bp
TTTTAATGAAATAGACATCAAAGCAATTGAAGTGCGAGTAGAAATACAAA
GCCATAGCCTGGGACTCCATAATTATCGCGATACAATAATCCAGCAGCTC
ATGACGATGGAAACAGATCAACGGCCATAAATTAAACACAAATTAAAAAT
AAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTGCAAA
CTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAGCTGC
TCGTGAGACTGGTTAATGAAGAAGAACTCGTAGACGATGCCAGCTAGCCC
ACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAGCTCC
AGCTTACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGCTCCA
TCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAATTGC
AATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCTGTGG
CATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGAAAACGACT
GCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGGTCTG
CATACATAACACCAATATAATTAATAAAAGAGAATCATAATCACAGGAAA
ATCATATGTTGGAAGAAAAAGCGATACATAAATTAAAAAGAAAAAAAGAG
ATGTTTTTCTAAATATTTTGTTACTTTAGATTTTTTATTTTAAAAGCAAA
CTAACTATAGTAAATAACTAACTCGAATAAATGAAATCATAGAATCACCT
GGCCGTTGGTAACGAACTTAAGAAGNCAGCATGCGACGGTGGATCCAAGA
AGCTGGGCGA
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