CX671503

Overview
NameCX671503
Unique NameCX671503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = -3
Query:  268 AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 561
            A + ++ E+++TF LV+T++A+    +    G+IA +AIGF V    L    + GASMNPA SFGPA++  +W NHW+YWVGP++G  LAG +YE+ F
Sbjct:  156 AGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNWANHWIYWVGPIMGAVLAGALYEYVF 252          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 3.102e-19
Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = -3
Query:  268 VGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 567
            + A + ++ E+++TF LV+T++A+    +    G+IA +AIG  V    L    + GASMNPA SFGPA++  +W+NHW+YWVGP+IG  LAG +YE+ F
Sbjct:  154 LSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGNWENHWIYWVGPIIGAVLAGGLYEYVF 252          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 46/102 (45.10%), Postives = 66/102 (64.71%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            L  GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGLA ++Y+F
Sbjct:  121 LHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLASLLYDF 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 45/102 (44.12%), Postives = 66/102 (64.71%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            L +GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:  121 LHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 47/102 (46.08%), Postives = 66/102 (64.71%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            L  GV    A   EI +T   V  ++AT  + + G LG+++ +AIGF +    L G  + GASMNPA SF PA+++ ++ NHWVYWVGP+IGG L G+VY+F
Sbjct:  121 LHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVS-LAIGFSLTLGHLFGLYYTGASMNPARSFAPAVLTRNFTNHWVYWVGPIIGGALGGLVYDF 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19
Identity = 47/95 (49.47%), Postives = 60/95 (63.16%), Query Frame = -3
Query:  268 AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 552
            AV+ E ++TF LV+ V A + DP +  +   AP+A+G  + A  L      GASMNPA SFGPA+V   W  HWVYWVGP+ GG LAGI+Y   F
Sbjct:  138 AVLIEALITFILVFVVKAVS-DPGRQDIKGSAPLAVGLAIAAGHLCAIKLSGASMNPARSFGPAVVQGVWTYHWVYWVGPIAGGLLAGIIYRLIF 231          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            L +GV    A   EI +T   V  ++AT  + + G +G++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:  119 LHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDF 219          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 1.179e-18
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            L +GV    A   EI +T   V  ++AT  + + G +G++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:  121 LHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFSNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 45/102 (44.12%), Postives = 65/102 (63.73%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            L  GV    A   EI +T   V  ++AT  + + G LG++A +A+GF +    L G  + GA MNPA SF PA+++ ++ NHWVYWVGP+IGGGL  ++Y+F
Sbjct:  121 LHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA-LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTRNFTNHWVYWVGPIIGGGLGSLLYDF 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = -3
Query:  268 AWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 561
            A   V+ E ++TF LV+ V+    D ++  +   AP+AIG  + A  L+   + GASMNPA SFGPA+V  +W + WVYWVGP++GG LAG VY  FF
Sbjct:  141 AGQGVMIEALITFILVFVVHGVC-DNRRSDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGNWTDQWVYWVGPIVGGILAGAVYRLFF 237          
The following BLAST results are available for this feature:
BLAST of CX671503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
AQP4_MOUSE2.375e-1945.92Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_BOVIN3.102e-1945.00Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
MIP_RABIT6.911e-1945.10Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
MIP_CAVPO6.911e-1944.12Lens fiber major intrinsic protein OS=Cavia porcel... [more]
MIP_RANPI9.026e-1946.08Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP_DROME9.026e-1949.47Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
MIP_RAT1.179e-1843.14Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE1.179e-1843.14Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_CANFA1.540e-1844.12Lens fiber major intrinsic protein OS=Canis famili... [more]
AQP_AEDAE1.540e-1846.94Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11E02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11E02-J3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671503 ID=CX671503; Name=CX671503; organism=Citrus sinensis; type=EST; length=860bp
TTTTAATGAAATAGACATCAAAGCAATTGAAGTGCGAGTAGAAATACAAA
GCCATAGCCTGGGACTCCATAATTATCGCGATACAATAATCCAGCAGCTC
ATGACGATGGAAACAGATCAACGGCCATAAATTAAACACAAATTAAAAAT
AAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTGCAAA
CTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAGCTGC
TCGTGAGACTGGTTAATGAAGAAGAACTCGTAGACGATGCCAGCTAGCCC
ACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAGCTCC
AGCTTACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGCTCCA
TCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAATTGC
AATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCTGTGG
CATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGAAAACGACT
GCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGGTCTG
CATACATAACACCAATATAATTAATAAAAGAGAATCATAATCACAGGAAA
ATCATATGTTGGAAGAAAAAGCGATACATAAATTAAAAAGAAAAAAAGAG
ATGTTTTTCTAAATATTTTGTTACTTTAGATTTTTTATTTTAAAAGCAAA
CTAACTATAGTAAATAACTAACTCGAATAAATGAAATCATAGAATCACCT
GGCCGTTGGTAACGAACTTAAGAAGNCAGCATGCGACGGTGGATCCAAGA
AGCTGGGCGA
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