CX671503

Overview
NameCX671503
Unique NameCX671503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.301e-14
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = -3
Query:  274 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 582
            AL +   A  AV  E+ +T  LV  ++A+  + +  +LG+ A ++IGF V    L G  F G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +  ++Y +
Sbjct:  120 ALHNNATAGQAVTVELFLTMQLVLCIFASTDERRGDNLGSPA-LSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGKFDDHWVFWIGPLVGAIIGSLLYNY 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.694e-14
Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = -3
Query:  274 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 588
            A  LS G      V  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++WVGP  G  +A   ++F
Sbjct:  157 ANGLSDGYSIGTGVAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQF 267          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.742e-14
Identity = 42/108 (38.89%), Postives = 59/108 (54.63%), Query Frame = -3
Query:  268 SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFF 591
            +A + S+ + AW     E ++TF LV   Y  + DP K  +G  A  +IG    A       +    +NPA S GP+ V   WD+HWVYW GPL+GG  +G+VYE+ F
Sbjct:  176 AAISHSAALAAWERFGVEFILTF-LVVLCYFVSTDPMKKFMGNSAA-SIGCAYSACCFVSMPY----LNPARSLGPSFVLNKWDSHWVYWFGPLVGGMASGLVYEYIF 277          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.142e-13
Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = -3
Query:  256 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDN-HWVYWVGPLIGGGLAGIVYEFFFINQS 582
            AL++   A  AVV E+++TF L   V+++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA++   + + HWV+WVGP++G   A I+Y +     S
Sbjct:  121 ALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVIMSRFSSAHWVFWVGPIVGAATAAIIYFYLLFPHS 229          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            LS+G      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++     +WD+HW++WVGP IG  +A   +++
Sbjct:  161 LSAGYSKGTGLAAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNNDKAWDDHWIFWVGPFIGAAIAAAYHQY 268          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 43/112 (38.39%), Postives = 65/112 (58.04%), Query Frame = -3
Query:  274 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 588
            A +L+SG      +  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A++      WD+HW++WVGPL+G  +A   +++
Sbjct:  163 ANSLASGYSRGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQY 273          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.491e-13
Identity = 43/110 (39.09%), Postives = 64/110 (58.18%), Query Frame = -3
Query:  256 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWD-NHWVYWVGPLIGGGLAGIVYEFFFINQS 582
            ALS+      AVV E+++TF L   ++++    +   +G+ A ++IG  V    L G  F G SMNPA SFGPA+V   +  +HWV+WVGP++G  LA I+Y +     S
Sbjct:  121 ALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPVGSPA-LSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFSPSHWVFWVGPIVGAVLAAILYFYLLFPSS 229          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = -3
Query:  274 AFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 588
            A +L+SG      +  EIV TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA S G A+V      WD+HW++WVGPL+G  +A   +++
Sbjct:  165 ANSLASGYSRGAGLGAEIVGTFVLVYTVFS-ATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQY 275          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.948e-13
Identity = 38/103 (36.89%), Postives = 61/103 (59.22%), Query Frame = -3
Query:  274 ALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 582
            AL++   A  AV  E+ +T  LV  ++ +  D ++G       ++IGF V    L G  + G SMNPA S  PA+V+  +D+HWV+W+GPL+G  +A ++Y +
Sbjct:  120 ALNNNSTAGQAVTVELFLTLQLVLCIFPST-DKRRGKQLGHPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGKFDDHWVFWIGPLVGAIVASLLYNY 221          
BLAST of CX671503 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.544e-13
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -3
Query:  274 LSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 579
            LS G      V  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA     G  +NPA SFG A++     +WD+ W++WVGP +G  +A   ++F
Sbjct:  160 LSDGYNVGVGVGAEIIGTFVLVYTVFS-ATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQF 267          
The following BLAST results are available for this feature:
BLAST of CX671503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 137
Match NameE-valueIdentityDescription
AQP2_RAT2.301e-1438.83Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
PIP25_ARATH6.694e-1439.29Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
BIB_DROME8.742e-1438.89Neurogenic protein big brain OS=Drosophila melanog... [more]
AQP5_SHEEP1.142e-1338.18Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
PIP25_MAIZE1.491e-1338.53Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP21_MAIZE1.491e-1338.39Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
AQP5_MOUSE1.491e-1339.09Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
PIP22_MAIZE1.948e-1340.18Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
AQP2_SHEEP1.948e-1336.89Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
PIP26_ARATH2.544e-1339.45Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11E02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11E02-J3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671503 ID=CX671503; Name=CX671503; organism=Citrus sinensis; type=EST; length=860bp
TTTTAATGAAATAGACATCAAAGCAATTGAAGTGCGAGTAGAAATACAAA
GCCATAGCCTGGGACTCCATAATTATCGCGATACAATAATCCAGCAGCTC
ATGACGATGGAAACAGATCAACGGCCATAAATTAAACACAAATTAAAAAT
AAAAAGAAAGAACCTCGGTAAAAGCAAATTAAATACAACATCCGTGCAAA
CTCACATAGATGGCAAGCTTTTAGCTTAGTACTCGGTTGTTGGGAGCTGC
TCGTGAGACTGGTTAATGAAGAAGAACTCGTAGACGATGCCAGCTAGCCC
ACCACCGATGAGTGGCCCGACCCAGTAGACCCAGTGGTTGTCCCAGCTCC
AGCTTACCAAAGCTGGCCCGAATGACACTGCTGGGTTCATTGAAGCTCCA
TCAAACGCCCCGCCCGCCAAGATGTTGGCTCCTACAATGAAACCAATTGC
AATTGGTGCAATTGTCCCCAAGCTTCCCTTCTTTGGGTCCAGGGCTGTGG
CATACACTGTGTACACTAGTCCGAATGTCATCACGATCTCGAAAACGACT
GCGTTCCATGCACCAACTCCAGATGAGAGAGCAAAAGCAGATGTGGTCTG
CATACATAACACCAATATAATTAATAAAAGAGAATCATAATCACAGGAAA
ATCATATGTTGGAAGAAAAAGCGATACATAAATTAAAAAGAAAAAAAGAG
ATGTTTTTCTAAATATTTTGTTACTTTAGATTTTTTATTTTAAAAGCAAA
CTAACTATAGTAAATAACTAACTCGAATAAATGAAATCATAGAATCACCT
GGCCGTTGGTAACGAACTTAAGAAGNCAGCATGCGACGGTGGATCCAAGA
AGCTGGGCGA
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