CX671484

Overview
NameCX671484
Unique NameCX671484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_PROM2 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9215) GN=groL2 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.010e-49
Identity = 103/185 (55.68%), Postives = 131/185 (70.81%), Query Frame = -2
Query:  271 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 825
            ++  ++AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HLS  +    DK    +E +GA+IV+ +L AP   IA NA           K   +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  336 NEQAVKARCDQIKKQMDETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLKGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_PROM1 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain NATL1A) GN=groL2 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.046e-48
Identity = 105/184 (57.07%), Postives = 130/184 (70.65%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE---DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            + AR  Q+KK++ ETDS YD EKL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+   PA++D        +E +GA+IV+ AL +P   IA NA           K      GYNA T +Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VNARCEQIKKQMDETDSTYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PALEDWSSTNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_PROMT (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain NATL2A) GN=groL1 PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.784e-48
Identity = 102/181 (56.35%), Postives = 126/181 (69.61%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            + AR  Q+KK++ ETDS YD EKL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +          +E +GA+IV+ AL +P   IA NA           K      GYNA T +Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VNARCEQIKKQMDETDSTYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALGDWSSSNLSGEELIGANIVEAALTSPLMRIAENAGANGAVVAENVKSKPVNDGYNAATGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_DICTD (60 kDa chaperonin OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=groL PE=3 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.331e-48
Identity = 102/186 (54.84%), Postives = 138/186 (74.19%), Query Frame = -2
Query:  271 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 825
            +K +I+ARIAQ+KK+L ETDS +D EKL ER+AKL+GGVAVIKVGAATE EL+++K RIEDA +AT AA+EEGIVPGGG AL+     + A+ D K+++ DER+G +IV+++L  P  LIA+NA           K+ +   GY+A  D++ NM  AG++DP KVTR ALQNAAS+A +VLTT+ +
Sbjct:  338 NKKDIEARIAQIKKQLEETDSEFDREKLQERLAKLAGGVAVIKVGAATEVELKEKKHRIEDALSATKAAVEEGIVPGGGVALIRT---IKALDDIKVDNEDERIGVEIVRRSLDVPLKLIANNAGKEGSIIAEKVKEMDGPMGYDAARDRFVNMFDAGIVDPCKVTRSALQNAASIAALVLTTEGL 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.192e-48
Identity = 101/184 (54.89%), Postives = 135/184 (73.37%), Query Frame = -2
Query:  274 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQA 825
            +K EI+ARI+Q+K ++AET S +D EKL ER+AKL+GGVAVI+VGAATETE++++KLR+EDA  AT AA+EEGI+ GGG+A +H S  V  +  KLE  DER GA I+ KAL AP S IA NA           ++ +   G+NA+T+KY +M++ G++DP+KVTR ALQNA SVA   LTT+A
Sbjct:  336 NKAEIEARISQIKAQIAETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEKKLRMEDALAATRAAVEEGIIAGGGSAYIHASKEVAKLAAKLE-GDERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTGVGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEA 518          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_EMIHU (60 kDa chaperonin, chloroplastic OS=Emiliania huxleyi GN=groL PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.781e-48
Identity = 101/186 (54.30%), Postives = 133/186 (71.51%), Query Frame = -2
Query:  271 ASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 828
            ++K E+ AR  QL++++  +DS Y+ EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  L+H++  +     +    DE LG  IV+KAL AP   IA NA           K+S++  GYNA T++  +M +AG+IDPAKVTR  LQNAAS+A M+LTT+ I
Sbjct:  337 SNKQEVLARCEQLRRQMETSDSTYEKEKLQERLAKLTGGVAVIKVGAATETEMKDRKLRLEDAVNATKAAVEEGIVPGGGTTLIHIAAELLEWVKETLTGDELLGGLIVEKALQAPLKKIALNAGENGSIIVERIKESDFEIGYNAATNEIVDMYEAGIIDPAKVTRSTLQNAASIASMILTTECI 522          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.781e-48
Identity = 101/181 (55.80%), Postives = 127/181 (70.17%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            + AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    DK    +E +GA+IV+ +L +P   IA NA           K   +  G+NA T  Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VTARCDQIKKQMDETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_ACAM1 (60 kDa chaperonin 2 OS=Acaryochloris marina (strain MBIC 11017) GN=groL2 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.781e-48
Identity = 97/182 (53.30%), Postives = 131/182 (71.98%), Query Frame = -2
Query:  271 EIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 816
            ++QAR  Q+++++ ET+S YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA N+T AA+EEGIVPGGG  L HL   + +        +E +GA IV++AL AP   IA NA           ++ E+  G++A  +++ +M  AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  339 DVQARCEQIRRQMDETESSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINSTKAAVEEGIVPGGGTTLAHLGPQLASWAADNLTGEELIGATIVERALTAPLKRIAENAGQNGAVIAERVREKEFNVGFDASVNEFTDMFAAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4)

HSP 1 Score: 191.045 bits (484), Expect = 6.781e-48
Identity = 106/185 (57.30%), Postives = 135/185 (72.97%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD----KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            +++R  Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  L HL+   P ++D     L+D +E  GA IV +AL AP   IA NA           K+ E+  GYNA + +Y +ML AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  340 VKSRCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PQLEDWATGNLKD-EELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKEFNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.856e-48
Identity = 101/181 (55.80%), Postives = 125/181 (69.06%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            +QAR  Q+KK++ ET+S YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +          +E +GA+IV  AL AP   IA NA           K   +  GYNA    Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VQARCEQIKKQMDETESTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEQWAASTLSGEELIGANIVAAALTAPLMRIAENAGVNGAVVAENVKAKSFNEGYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
The following BLAST results are available for this feature:
BLAST of CX671484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_PROM28.010e-4955.6860 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH602_PROM11.046e-4857.0760 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH601_PROMT1.784e-4856.3560 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH60_DICTD2.331e-4854.8460 kDa chaperonin OS=Dictyoglomus turgidum (strain... [more]
CH60_CLOPH5.192e-4854.8960 kDa chaperonin OS=Clostridium phytofermentans (... [more]
CH60_EMIHU6.781e-4854.3060 kDa chaperonin, chloroplastic OS=Emiliania huxl... [more]
CH602_PROMP6.781e-4855.8060 kDa chaperonin 2 OS=Prochlorococcus marinus sub... [more]
CH602_ACAM16.781e-4853.3060 kDa chaperonin 2 OS=Acaryochloris marina (strai... [more]
CH601_SYNY36.781e-4857.3060 kDa chaperonin 1 OS=Synechocystis sp. (strain P... [more]
CH602_SYNPW8.856e-4855.8060 kDa chaperonin 2 OS=Synechococcus sp. (strain W... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11D03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11D03-H5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671484 ID=CX671484; Name=CX671484; organism=Citrus sinensis; type=EST; length=832bp
TTTTGCCCATAACCAAAAATAAATTTTCACCGCTGCATCTCAAGACGGTG
AAGAGCAGACAACATTTTACAGCAATAATCCCATAATTCCGTACAAAAAA
GACACGATTTTATATCAATTAAGTAAAACTTGTCTTTTTCAGTTCACCGC
AATAAAACCACTCTTTCATCTATAAAACTCCTAACTAAATCTGGAGAGTC
CTAGAGATTACACCATAAGACCTTGTGGCGGAGCGGCTACCGGAGTTTTG
GGCTTTGGCTTCTCCACGACAATAGCCTGAGTGGTCAGGACCATTCCTGC
AACTGAAGCCGCATTCTGCAATGCACATCTTGTCACCTTTGCAGGATCAA
TAACTCCAGCCTGAAGCATGTTCTCATACTTGTCTGTCATTGCATTGTAA
CCAGTCGTCCATTCACTATCTTTCACCTTCTCCACAACAACCTCACCTTC
AACTCCAGCATTGTGAGCTATCAGTGATGCAGGTGCTACCAGTGCCTTCT
GCACAATGTCAGCACCTAATCGCTCATCTGCATCTTCAAGCTTGTCCTTG
ATAGCAGGAACATGATCAGACAGATGAACCAGAGCAGCACCACCACCAGG
AACAATACCTTCCTCTATGGCTGCAAAAGTTGCATTCTTGGCATCTTCAA
TACGGAGTTTACGGTCCTCAAGCTCAGTTTCTGTGGCAGCTCCAACTTTA
ATAACAGCAACCCCGCCAGACAATTTAGCAATTCTCTCAGCAAGTTTCTC
TGAGTCATAAACAGAATCCGTCTCAGCCAACTCCTTTTTCAGCTGTGCAA
TTCTAGCTTGTATTTCATCCTTTGATGCAGCA
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