CX671484

Overview
NameCX671484
Unique NameCX671484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:383..1213. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.856e-48
Identity = 100/181 (55.25%), Postives = 127/181 (70.17%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            + +R  Q+KK++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    D     +E +GA+IV+ +L AP   IA NA           K   +  G+NA T +Y +M  AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VNSRCDQIKKQMEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADATLSGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_GALSU (60 kDa chaperonin, chloroplastic OS=Galdieria sulphuraria GN=groL PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.157e-47
Identity = 98/186 (52.69%), Postives = 137/186 (73.66%), Query Frame = -2
Query:  271 ASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 828
            A+++ ++AR  Q++K++  TDS Y+ EKL ER+AKL+GG+AVIKVGAATETE++D+KLR+EDA NAT AAIEEGIVPGGGA LVHL++ +      +   DE +GA IV+K++ AP   I  N            K+ +++ GY+A T K+ NM ++G+IDPAKVTR ALQNA+S+AGM+LTT+ +
Sbjct:  336 ANENNVKARCEQIRKQIEITDSSYEKEKLQERLAKLAGGIAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGATLVHLANDLFNWAKGVLKEDELIGALIVEKSITAPLKRIVQNEGKNGAIVVDEIKNLDFSIGYDASTSKFVNMYESGIIDPAKVTRSALQNASSIAGMILTTECL 521          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.157e-47
Identity = 102/181 (56.35%), Postives = 126/181 (69.61%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            + AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    +     +E +GA+IV  AL AP   IA NA           K    + GYNA T  Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VGARCEQIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPSLEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISEGYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_SYNR3 (60 kDa chaperonin OS=Synechococcus sp. (strain RCC307) GN=groL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 98/181 (54.14%), Postives = 132/181 (72.93%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++AR  Q++K++ ET+S YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    ++    +E +GA+IV +AL AP   IA NA           +   ++ G+NA +++Y +ML AG+IDPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VKARCEQIRKQMDETESTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALTEWANQNLSGEELIGANIVAQALDAPLKRIAENAGANGSVVAENVRHKPFSEGFNAASNEYVDMLAAGIIDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_LACGA (60 kDa chaperonin OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=groL PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 104/187 (55.61%), Postives = 131/187 (70.05%), Query Frame = -2
Query:  271 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 831
            A SKD I  R+ Q+KK++A+T S +D EKL ER+AKL+GGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV +   +     K +  D + G +IV KAL AP   IA NA           +  +   GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+
Sbjct:  334 AGSKDAISERVDQIKKQIADTTSDFDREKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALVDVMKSIQG-NVKGDSQDAQTGVNIVMKALGAPVRQIAENAGKDGAVILDHLEHEDPEIGYNAATDKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.511e-47
Identity = 100/181 (55.25%), Postives = 127/181 (70.17%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++ R  Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    +     +E +GA+IV+ +L AP   IA NA           K    + GYNA T  Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VKGRCEQIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLAADLQKWANSNLSGEELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_SYNS3 (60 kDa chaperonin 2 OS=Synechococcus sp. (strain CC9311) GN=groL2 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.973e-47
Identity = 99/181 (54.70%), Postives = 124/181 (68.51%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            +  R  Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L H++  +          +E +GA+IV  AL AP   IA NA           K   +  GYNA   +Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VSTRCEQIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHMAPALEEWAASNLSGEELIGANIVASALTAPLMRIAENAGVNGAVVAENVKSKSFNEGYNAANGEYVDMLSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.973e-47
Identity = 99/181 (54.70%), Postives = 127/181 (70.17%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++ R  Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    +     +E +G++IV+ +L AP   IA NA           K    + GYNA T  Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VKGRCEQIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLTHLASDLQKWANSNLSGEELIGSNIVEASLAAPLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_EUBE2 (60 kDa chaperonin OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=groL PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.577e-47
Identity = 99/185 (53.51%), Postives = 135/185 (72.97%), Query Frame = -2
Query:  271 SKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 825
            +K++I AR+AQ+K +L ET S +D EKL ER+AKL+GGVAVI+VGAATETE+++ KLR+EDA NAT AA+EEG+V GGG+A +H S  V  +   L   DE++GA I+ KAL AP   IA+NA           ++SE  TG++A  ++Y NM+ AG++DPAKVTR ALQNA SVA  +LTT+++
Sbjct:  336 AKEDIDARVAQIKAQLEETTSEFDKEKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGVVSGGGSAYIHASKKVAELVKTL-SGDEKIGAQIILKALEAPLFHIAYNAGLEGAVIINKVRESEVGTGFDAYKEEYVNMIDAGILDPAKVTRSALQNATSVASTLLTTESV 519          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_ANAVT (60 kDa chaperonin 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=groL1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.365e-47
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++ R+ Q+++++ ET+S YD EKL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    +     +E  GA IV +AL AP   IA NA           K+  +  G+NA T+++ +M +AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  340 VKGRVEQIRRQMEETESSYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
The following BLAST results are available for this feature:
BLAST of CX671484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_PROM58.856e-4855.2560 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH60_GALSU1.157e-4752.6960 kDa chaperonin, chloroplastic OS=Galdieria sulp... [more]
CH601_SYNPX1.157e-4756.3560 kDa chaperonin 1 OS=Synechococcus sp. (strain W... [more]
CH60_SYNR31.511e-4754.1460 kDa chaperonin OS=Synechococcus sp. (strain RCC... [more]
CH60_LACGA1.511e-4755.6160 kDa chaperonin OS=Lactobacillus gasseri (strain... [more]
CH601_PROM31.511e-4755.2560 kDa chaperonin 1 OS=Prochlorococcus marinus (st... [more]
CH602_SYNS31.973e-4754.7060 kDa chaperonin 2 OS=Synechococcus sp. (strain C... [more]
CH602_PROMM1.973e-4754.7060 kDa chaperonin 2 OS=Prochlorococcus marinus (st... [more]
CH60_EUBE22.577e-4753.5160 kDa chaperonin OS=Eubacterium eligens (strain A... [more]
CH601_ANAVT3.365e-4753.5960 kDa chaperonin 1 OS=Anabaena variabilis (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11D03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11D03-H5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671484 ID=CX671484; Name=CX671484; organism=Citrus sinensis; type=EST; length=832bp
TTTTGCCCATAACCAAAAATAAATTTTCACCGCTGCATCTCAAGACGGTG
AAGAGCAGACAACATTTTACAGCAATAATCCCATAATTCCGTACAAAAAA
GACACGATTTTATATCAATTAAGTAAAACTTGTCTTTTTCAGTTCACCGC
AATAAAACCACTCTTTCATCTATAAAACTCCTAACTAAATCTGGAGAGTC
CTAGAGATTACACCATAAGACCTTGTGGCGGAGCGGCTACCGGAGTTTTG
GGCTTTGGCTTCTCCACGACAATAGCCTGAGTGGTCAGGACCATTCCTGC
AACTGAAGCCGCATTCTGCAATGCACATCTTGTCACCTTTGCAGGATCAA
TAACTCCAGCCTGAAGCATGTTCTCATACTTGTCTGTCATTGCATTGTAA
CCAGTCGTCCATTCACTATCTTTCACCTTCTCCACAACAACCTCACCTTC
AACTCCAGCATTGTGAGCTATCAGTGATGCAGGTGCTACCAGTGCCTTCT
GCACAATGTCAGCACCTAATCGCTCATCTGCATCTTCAAGCTTGTCCTTG
ATAGCAGGAACATGATCAGACAGATGAACCAGAGCAGCACCACCACCAGG
AACAATACCTTCCTCTATGGCTGCAAAAGTTGCATTCTTGGCATCTTCAA
TACGGAGTTTACGGTCCTCAAGCTCAGTTTCTGTGGCAGCTCCAACTTTA
ATAACAGCAACCCCGCCAGACAATTTAGCAATTCTCTCAGCAAGTTTCTC
TGAGTCATAAACAGAATCCGTCTCAGCCAACTCCTTTTTCAGCTGTGCAA
TTCTAGCTTGTATTTCATCCTTTGATGCAGCA
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