CX671484

Overview
NameCX671484
Unique NameCX671484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:383..1213. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_ANASP (60 kDa chaperonin 1 OS=Anabaena sp. (strain PCC 7120) GN=groL1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.365e-47
Identity = 97/181 (53.59%), Postives = 130/181 (71.82%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++ R+ Q+++++ ET+S YD EKL ER+AKLSGGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    +     +E  GA IV +AL AP   IA NA           K+  +  G+NA T+++ +M +AG++DPAKVTR ALQNAAS+AGMVLTT+ I
Sbjct:  340 VKGRVEQIRRQMEETESSYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLTPELEVWANSNLKDEELTGALIVARALPAPLKRIAENAGQNGAVIAERVKEKAFNVGFNAATNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_PELTS (60 kDa chaperonin OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=groL PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 5.740e-47
Identity = 104/191 (54.45%), Postives = 137/191 (71.73%), Query Frame = -2
Query:  271 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIK--DKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 831
            A S DEI  R+AQ+KK++ ET S +D EKL ER+AKL+GGVAVI+VGAATETE++D+KLRIEDA NAT AA+EEGIVPGGG A      ++ A+K  D L+    DE+ G DIV++AL  P   IA NA           K+++   G+NA+T ++ NM+ AG++DPAKVTR ALQNAAS+A M+LTT+ +
Sbjct:  335 AGSTDEITKRVAQIKKQIEETTSEFDKEKLQERLAKLAGGVAVIQVGAATETEMKDKKLRIEDALNATRAAVEEGIVPGGGVA------YISALKGLDGLDAGSLDEKTGIDIVRRALEEPLRQIASNAGLEGSVIVEKVKNADPGIGFNALTGEFVNMIDAGIVDPAKVTRTALQNAASIAAMILTTETL 519          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_SYNE7 (60 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groL PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.497e-47
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++AR+ Q+++++ ET+S YD EKL ER+AKLSGGVAV+KVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  L HL+  +          +E  GA IV +AL AP   IA NA           K+  +  GY+A  +++ NM  AG++DPAKVTR ALQNAAS+A MVLTT+ I
Sbjct:  340 VKARVDQIRRQIEETESSYDKEKLQERLAKLSGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEGYDASNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.497e-47
Identity = 101/187 (54.01%), Postives = 134/187 (71.66%), Query Frame = -2
Query:  277 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 831
            A     I+ R+ Q+K+++ ET S +D EKL ER+AKLSGGVAVI+VGAATETEL++RKLRIEDA NAT A +EEG+V GGGA+LVH+   +PA++  LE  + DER G  I+++AL  P   IA NA             SE   G++A+T+KY NM++AG++DP KVTR ALQNAASV+ M+LTT+
Sbjct:  334 AGDSSAIKDRVNQIKRQIEETTSDFDKEKLQERLAKLSGGVAVIQVGAATETELKERKLRIEDALNATRAGVEEGMVAGGGASLVHV---IPAVEALLETTEGDERTGVKIIRRALEEPLRQIAANAGLEGSVIVEKVMSSEKGIGFDALTEKYVNMIEAGIVDPTKVTRSALQNAASVSAMLLTTE 517          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_SYNS9 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain CC9902) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.497e-47
Identity = 101/181 (55.80%), Postives = 124/181 (68.51%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            + AR  Q+KK++ ETDS YD EKL ER+AKL+GGVAV+KVGAATETE++D+KLR+EDA NAT AA+EEGIVPGGG  L HL+  +    +     +E +GA+IV  AL AP   IA NA           K      GYNA    Y +ML AG++DPAKVTR  LQNAAS+AGMVLTT+ I
Sbjct:  340 VGARCEQIKKQMDETDSTYDKEKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPALEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRSNNEGYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_SYNP6 (60 kDa chaperonin 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groL1 PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.497e-47
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = -2
Query:  271 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 813
            ++AR+ Q+++++ ET+S YD EKL ER+AKLSGGVAV+KVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG  L HL+  +          +E  GA IV +AL AP   IA NA           K+  +  GY+A  +++ NM  AG++DPAKVTR ALQNAAS+A MVLTT+ I
Sbjct:  340 VKARVDQIRRQIEETESSYDKEKLQERLAKLSGGVAVVKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEEWATANLSGEELTGAQIVARALTAPLKRIAENAGLNGAVISERVKELPFDEGYDASNNQFVNMFTAGIVDPAKVTRSALQNAASIAAMVLTTECI 520          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH601_MOOTA (60 kDa chaperonin 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=groL1 PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 7.497e-47
Identity = 99/184 (53.80%), Postives = 134/184 (72.83%), Query Frame = -2
Query:  271 KDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 822
            K+ +  RIAQ+KK++ ETDS YD EKL ER+AKL+GGVAVI+VGAATETEL+++K R+EDA  AT AA+EEGIVPGGGA LVH    +PA++    + DE +G  IV++AL  P   IA NA           +  +   G++A+ ++Y +M++AG++DPAKVTR ALQNAAS+A M+LTT+AI
Sbjct:  338 KEAVDGRIAQIKKQIEETDSDYDREKLQERLAKLAGGVAVIRVGAATETELKEKKHRVEDALAATRAAVEEGIVPGGGATLVHA---IPAVEKIQAEGDEAVGVRIVRRALEEPLRQIAANAGLEGSVIVERVRSEQPGIGFDAVKEEYVDMIKAGIVDPAKVTRSALQNAASIASMLLTTEAI 518          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_LACS1 (60 kDa chaperonin OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.279e-46
Identity = 100/187 (53.48%), Postives = 136/187 (72.73%), Query Frame = -2
Query:  271 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 831
            A  KD+I  R+ Q+KK+++ET S +D EKL ER+AKLSGGVAVIKVGAATETEL++RK RIEDA NAT AA+EEG VPGGG ALV++   V A++   E+ D + G +IV++AL  P   IA NA           K+ +   G+NA T+++ +M++AG++DP KVTR ALQNAASV+ ++LTT+A+
Sbjct:  334 AGDKDKIAERVEQIKKQISETTSDFDREKLQERLAKLSGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGFVPGGGTALVNVIGKVAALE---EEGDVQTGINIVKRALEEPVRQIAENAGLEGSVIVEKLKEQKPGVGFNAATNEWVDMVEAGIVDPTKVTRSALQNAASVSALLLTTEAV 517          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_LACRJ (60 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.279e-46
Identity = 102/188 (54.26%), Postives = 138/188 (73.40%), Query Frame = -2
Query:  271 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 831
            A SK+ IQ R+ Q+K+E+A++ S +D EKL ER+AKLSGGVAV+KVGAATETEL+++K RIEDA NAT AA++EG VPGGG AL+++   +PA+ DK+E D DE  G +IV+ AL AP   IA NA           K+ +   GYNA   K+E+M++AG++DP  VTR ALQNAASV+ ++LTT+A+
Sbjct:  334 AGSKEAIQERVDQIKQEIAKSTSDFDKEKLQERLAKLSGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALINV---IPAL-DKIEADGDELTGINIVKAALEAPVRQIAENAGVEGSVIVNELKNEKEGIGYNAADGKFEDMIKAGIVDPTMVTRSALQNAASVSALLLTTEAV 517          
BLAST of CX671484 vs. ExPASy Swiss-Prot
Match: CH60_LACRD (60 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groL PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.279e-46
Identity = 102/188 (54.26%), Postives = 138/188 (73.40%), Query Frame = -2
Query:  271 AASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXKDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 831
            A SK+ IQ R+ Q+K+E+A++ S +D EKL ER+AKLSGGVAV+KVGAATETEL+++K RIEDA NAT AA++EG VPGGG AL+++   +PA+ DK+E D DE  G +IV+ AL AP   IA NA           K+ +   GYNA   K+E+M++AG++DP  VTR ALQNAASV+ ++LTT+A+
Sbjct:  334 AGSKEAIQERVDQIKQEIAKSTSDFDKEKLQERLAKLSGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALINV---IPAL-DKIEADGDELTGINIVKAALEAPVRQIAENAGVEGSVIVNELKNEKEGIGYNAADGKFEDMIKAGIVDPTMVTRSALQNAASVSALLLTTEAV 517          
The following BLAST results are available for this feature:
BLAST of CX671484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_ANASP3.365e-4753.5960 kDa chaperonin 1 OS=Anabaena sp. (strain PCC 71... [more]
CH60_PELTS5.740e-4754.4560 kDa chaperonin OS=Pelotomaculum thermopropionic... [more]
CH60_SYNE77.497e-4754.1460 kDa chaperonin OS=Synechococcus elongatus (stra... [more]
CH60_ALKOO7.497e-4754.0160 kDa chaperonin OS=Alkaliphilus oremlandii (stra... [more]
CH601_SYNS97.497e-4755.8060 kDa chaperonin 1 OS=Synechococcus sp. (strain C... [more]
CH601_SYNP67.497e-4754.1460 kDa chaperonin 1 OS=Synechococcus sp. (strain A... [more]
CH601_MOOTA7.497e-4753.8060 kDa chaperonin 1 OS=Moorella thermoacetica (str... [more]
CH60_LACS11.279e-4653.4860 kDa chaperonin OS=Lactobacillus salivarius subs... [more]
CH60_LACRJ1.279e-4654.2660 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]
CH60_LACRD1.279e-4654.2660 kDa chaperonin OS=Lactobacillus reuteri (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11D03_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11D03-H5-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671484 ID=CX671484; Name=CX671484; organism=Citrus sinensis; type=EST; length=832bp
TTTTGCCCATAACCAAAAATAAATTTTCACCGCTGCATCTCAAGACGGTG
AAGAGCAGACAACATTTTACAGCAATAATCCCATAATTCCGTACAAAAAA
GACACGATTTTATATCAATTAAGTAAAACTTGTCTTTTTCAGTTCACCGC
AATAAAACCACTCTTTCATCTATAAAACTCCTAACTAAATCTGGAGAGTC
CTAGAGATTACACCATAAGACCTTGTGGCGGAGCGGCTACCGGAGTTTTG
GGCTTTGGCTTCTCCACGACAATAGCCTGAGTGGTCAGGACCATTCCTGC
AACTGAAGCCGCATTCTGCAATGCACATCTTGTCACCTTTGCAGGATCAA
TAACTCCAGCCTGAAGCATGTTCTCATACTTGTCTGTCATTGCATTGTAA
CCAGTCGTCCATTCACTATCTTTCACCTTCTCCACAACAACCTCACCTTC
AACTCCAGCATTGTGAGCTATCAGTGATGCAGGTGCTACCAGTGCCTTCT
GCACAATGTCAGCACCTAATCGCTCATCTGCATCTTCAAGCTTGTCCTTG
ATAGCAGGAACATGATCAGACAGATGAACCAGAGCAGCACCACCACCAGG
AACAATACCTTCCTCTATGGCTGCAAAAGTTGCATTCTTGGCATCTTCAA
TACGGAGTTTACGGTCCTCAAGCTCAGTTTCTGTGGCAGCTCCAACTTTA
ATAACAGCAACCCCGCCAGACAATTTAGCAATTCTCTCAGCAAGTTTCTC
TGAGTCATAAACAGAATCCGTCTCAGCCAACTCCTTTTTCAGCTGTGCAA
TTCTAGCTTGTATTTCATCCTTTGATGCAGCA
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