CX671478

Overview
NameCX671478
Unique NameCX671478
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: RRP2_SPIOL (30S ribosomal protein 2, chloroplastic OS=Spinacia oleracea GN=PSRP2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.454e-30
Identity = 72/176 (40.91%), Postives = 108/176 (61.36%), Query Frame = -2
Query:  229 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 738
            +L+VGN+P ++++++L  + E+ G +EIAEV+Y++ + RSR FGFVTM TVE+A   +E  +  +I GR + VN      +     T      +  E  +++Y+GNL   V N  L+  FSE GKV+ A+V     T +S GFGFV+ SSE E+  AI AL+   L+G+ IRVN A
Sbjct:   85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALNNSVLEGQKIRVNKA 260          

HSP 2 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = -2
Query:  226 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 456
            R+YVGN+P  ++N  L  +  EHG +  A V+YD+ +GRSR FGFVTM +  + N  I  L+   + GR I+VN+ E
Sbjct:   85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITE 161          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: NSR1_YEAST (Nuclear localization sequence-binding protein OS=Saccharomyces cerevisiae GN=NSR1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.680e-24
Identity = 64/180 (35.56%), Postives = 102/180 (56.67%), Query Frame = -2
Query:  220 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT--VNKAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 741
            A +FVG L + +D E L   FE  G V  A VIY R TDRSRG+G+V       AEKA++     +IDGR +   ++ + P G   +RA +      EP   +++GNL +  D   + ++F++HG+VV+ R+    ET + +GFG+V  S+  +   A+ AL G+ +D R +R++ +  R
Sbjct:  168 ATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSSPR 346          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: ROC2_ARATH (29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.505e-22
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = -2
Query:  202 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 462
            G R+YVGNL W VD+  LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS  E+  AI +L+G +LDGR IRV+ AE R  R  F
Sbjct:  256 GNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF 342          

HSP 2 Score: 98.9821 bits (245), Expect = 4.100e-20
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = -2
Query:  475 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 744
            D KLFVGNL ++VDS +LA LFE AG VE+ EVIY++ T RSRGFGFVTMST  E E A + F+ Y+ +GR L VN   P   + E   R PR
Sbjct:   98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190          

HSP 3 Score: 82.8037 bits (203), Expect = 3.040e-15
Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = -2
Query:  211 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 471
            F P  +++VGNL + VD+A+L Q+F   G V    V+YD+ TGRSRGFGFVTMS+  E+  A    +G   +GR +RVN      +R
Sbjct:   95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKR 181          

HSP 4 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 36/79 (45.57%), Postives = 54/79 (68.35%), Query Frame = -2
Query:  502 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 738
            +L+VGNL + VD   L  LF + G V  A VIY+R++ RS+GFGFVT+S+ +E +KA+   +  D+DGR + V++A  R
Sbjct:  258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEAR 336          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 1.840e-20
Identity = 62/188 (32.98%), Postives = 103/188 (54.79%), Query Frame = -2
Query:  205 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 735
            ++V N   D D EKL   FE  G +   +V+ ++E  +S+GFGFV   T E AE AV+  +  D+ +G+ L V +A  +  + +   R FE           G  +YV NL   +D+ RL   FS +G + +A+V+ D E GRS+GFGFV  ++ +E   A+  L+G+ +  + + V +A+ ++ R +
Sbjct:  185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370          

HSP 2 Score: 75.485 bits (184), Expect = 4.854e-13
Identity = 53/178 (29.78%), Postives = 87/178 (48.88%), Query Frame = -2
Query:  211 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 741
            A L+VG+LP DV+   L   F  AG V    V  +  T RS G+ +V      +AE+A++  + +D+      V     R    +R P +   G   +++ NL   +DN  +   FS  G +++ +V  D E G S+G+GFV   +E   N +I  ++G  L+G+ + V     R+ R
Sbjct:    2 ASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMN-FDL------VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKER 171          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20
Identity = 61/196 (31.12%), Postives = 103/196 (52.55%), Query Frame = -2
Query:  178 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF*PNMTCHR 735
            +++ N   D+D ++L  +F   G     +V+ + +T RSRGFGFV     EEA+KAV   +  +++GR++ V +A  R  +     R FE           G  +YV NL   +D+ RL + FS +G + +A+V+   E G S+GFGFV  SS  E   A+  ++G+ +  + + V +A+ ++ R +   N    R
Sbjct:  193 VYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQR 385          

HSP 2 Score: 72.7886 bits (177), Expect = 3.146e-12
Identity = 51/178 (28.65%), Postives = 86/178 (48.31%), Query Frame = -2
Query:  211 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 741
            A L+VG+L  DV    L   F  AG +    V  +  T RS G+ ++      +AE+A++  +   I GR + +  +       +R P + + G   +++ NL   +DN  L   FS  G +++ +VV D     SRG+GFV   ++   N AI  ++G  L+ R + V   + R+ R
Sbjct:   11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWS-------QRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRER 179          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 63/196 (32.14%), Postives = 101/196 (51.53%), Query Frame = -2
Query:  178 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF*PNMTCHR 735
            ++V NLP DVD + L  LF + G +   +V+ +  +  SR FGFV     EEA+KAV   +  ++ GRLL   +A  R  +     R FE           G  +YV NL   +D+ +L + FS +G + +A+V+   E G S+GFGFV  SS  E   A+  ++G+ +  + + V +A+ ++ R +   N    R
Sbjct:  193 IYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYMQR 385          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 62/184 (33.70%), Postives = 99/184 (53.80%), Query Frame = -2
Query:  214 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 735
            +FV N+  D+D EKL  LF + G  E  +VI +  + +S+GFGFV   T E A+KAV   H   IDG++L V +A  +  +     R FE          PG  IY+ NL   +++ +L++ FS  G +  A+V+   E G+ +GFG V  SS  E   A+  ++G+ +  + + V + + R+R
Sbjct:  201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARRR 381          

HSP 2 Score: 70.0922 bits (170), Expect = 2.039e-11
Identity = 43/176 (24.43%), Postives = 90/176 (51.14%), Query Frame = -2
Query:  211 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 735
            +F+ NL   +D+  L  LF   G +   +V+   + + S+G+ +V   ++  A +A+   +   ++ R + V +   P     E   R       ++V N+  ++D+ +L+++F E+G   + +V+ D  +G+S+GFGFV   +      A+  L G+++DG+ + V  A+ +  R
Sbjct:  108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: PABP5_PANTR (Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 62/184 (33.70%), Postives = 99/184 (53.80%), Query Frame = -2
Query:  214 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 735
            +FV N+  D+D EKL  LF + G  E  +VI +  + +S+GFGFV   T E A+KAV   H   IDG++L V +A  +  +     R FE          PG  IY+ NL   +++ +L++ FS  G +  A+V+   E G+ +GFG V  SS  E   A+  ++G+ +  + + V + + R+R
Sbjct:  201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARRR 381          

HSP 2 Score: 70.0922 bits (170), Expect = 2.039e-11
Identity = 43/176 (24.43%), Postives = 90/176 (51.14%), Query Frame = -2
Query:  211 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 735
            +F+ NL   +D+  L  LF   G +   +V+   + + S+G+ +V   ++  A +A+   +   ++ R + V +   P     E   R       ++V N+  ++D+ +L+++F E+G   + +V+ D  +G+S+GFGFV   +      A+  L G+++DG+ + V  A+ +  R
Sbjct:  108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: PABP5_MACMU (Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 62/184 (33.70%), Postives = 99/184 (53.80%), Query Frame = -2
Query:  214 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 735
            +FV N+  D+D EKL  LF + G  E  +VI +  + +S+GFGFV   T E A+KAV   H   IDG++L V +A  +  +     R FE          PG  IY+ NL   +++ +L++ FS  G +  A+V+   E G+ +GFG V  SS  E   A+  ++G+ +  + + V + + R+R
Sbjct:  201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQARRR 381          

HSP 2 Score: 70.0922 bits (170), Expect = 2.039e-11
Identity = 43/176 (24.43%), Postives = 90/176 (51.14%), Query Frame = -2
Query:  211 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 735
            +F+ NL   +D+  L  LF   G +   +V+   + + S+G+ +V   ++  A +A+   +   ++ R + V +   P     E   R       ++V N+  ++D+ +L+++F E+G   + +V+ D  +G+S+GFGFV   +      A+  L G+++DG+ + V  A+ +  R
Sbjct:  108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280          
BLAST of CX671478 vs. ExPASy Swiss-Prot
Match: PABP5_HYLLA (Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.471e-19
Identity = 62/184 (33.70%), Postives = 99/184 (53.80%), Query Frame = -2
Query:  214 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 735
            +FV N+  D+D EKL  LF + G  E  +VI +  + +S+GFGFV   T E A+KAV   H   IDG++L V +A  +  +     R FE          PG  IY+ NL   +++ +L++ FS  G +  A+V+   E G+ +GFG V  SS  E   A+  ++G+ +  + + V + + R+R
Sbjct:  201 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQARRR 381          

HSP 2 Score: 70.0922 bits (170), Expect = 2.039e-11
Identity = 43/176 (24.43%), Postives = 90/176 (51.14%), Query Frame = -2
Query:  211 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 735
            +F+ NL   +D+  L  LF   G +   +V+   + + S+G+ +V   ++  A +A+   +   ++ R + V +   P     E   R       ++V N+  ++D+ +L+++F E+G   + +V+ D  +G+S+GFGFV   +      A+  L G+++DG+ + V  A+ +  R
Sbjct:  108 IFIKNLDKSIDNRALFYLFSAFGNILSCKVVC--DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIER 280          
The following BLAST results are available for this feature:
BLAST of CX671478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
RRP2_SPIOL7.454e-3040.9130S ribosomal protein 2, chloroplastic OS=Spinacia... [more]
NSR1_YEAST4.680e-2435.56Nuclear localization sequence-binding protein OS=S... [more]
ROC2_ARATH1.505e-2259.7729 kDa ribonucleoprotein, chloroplastic OS=Arabido... [more]
PABP_DROME1.840e-2032.98Polyadenylate-binding protein OS=Drosophila melano... [more]
EPAB_XENTR6.993e-2031.12Embryonic polyadenylate-binding protein OS=Xenopus... [more]
PAP1L_HUMAN3.471e-1932.14Polyadenylate-binding protein 1-like OS=Homo sapie... [more]
PABP5_PONPY3.471e-1933.70Polyadenylate-binding protein 5 OS=Pongo pygmaeus ... [more]
PABP5_PANTR3.471e-1933.70Polyadenylate-binding protein 5 OS=Pan troglodytes... [more]
PABP5_MACMU3.471e-1933.70Polyadenylate-binding protein 5 OS=Macaca mulatta ... [more]
PABP5_HYLLA3.471e-1933.70Polyadenylate-binding protein 5 OS=Hylobates lar G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11C11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C11-F21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671478 ID=CX671478; Name=CX671478; organism=Citrus sinensis; type=EST; length=925bp
CAAAAGTGATGTGATTTCAGCTTTCAACTCCATAAGCAAATTTTCCATTA
AACTATCTGGCAGAAACTCAACAAATCTCATTCAAAAAAAAAAAAAAAAG
GGAAAAAAAAAGATAGTGAACCAGGACAGAGAAAGAGGGAAGAAAATAAA
TAGAGACCACCACTAGCAGACCTTGAATCTATGACATGTCATGTTCGGTC
AAAAGGAACTGCGTCTTTGTCTATCCTCTGCAACATTTACTCTGATTGCT
CTCCCATCCAGATTCTGTCCGTCAAGAGCAGCAATTGCGTCATTCAATTC
AGTCTCACTAGACATTGTAACAAAGCCAAAACCTCGTGAACGTCCAGTCT
CCCTGTCATAAACAACCCGGGCATTCACCACCTTACCATGCTCACTAAAA
ACTTGCTCTAGACGAGCATTATCCACTTCCCATGGCAGGTTGCCCACATA
GATTCTAAAACCAGGCTCAAACACACGAGGGGCGCGTTCAGGCTGTGTTC
CTCTTGGAGCAGCTTTATTTACCGTCAAAAGCCTTCCATCTATGTCATAT
CTGTGAAACATTTCCACAGCCTTTTCAGCTTCCTCAACAGTACTCATTGT
CACGAACCCAAAGCCACGACTCCGGTCAGTCTCCCTGTTGTAAATAACCT
CGGCAATCTCGACAGTTCCAGCCTTCTCAAAAAGCATAGCAAGCTTTTCA
CTATCAACATCATAGGGCAAGTTCCCAACAAACAACTTAGCATCCTCAGG
TGGTTCCACAAATTCCTCTTCCTCAAAAACGCCCTCTTCACCACTCTCCT
CCTGCCTTTCACCAGCCTCAACAACTGTGTCTTCGCCTTCGGGTTCCCCC
CCATCAGATAAATTCCCTTCAGTTTCATCGGCTCCTTGATTTTCCCAATT
CGGTTCTTCTTCCCCATTCTCTTCT
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