CX671476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.859e-21 Identity = 48/68 (70.59%), Postives = 57/68 (83.82%), Query Frame = -3 Query: 502 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 705 D L+PGG FDPLGLA+ P+ FA LKVKE+KNGRLAMF+M GFF+ A VTG+GP+ENLA HL+DP NN Sbjct: 149 DPLYPGGSFDPLGLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = -3 Query: 502 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 705 D L+PG FDPLGLA DPD FA LKVKEIKNGRLA F+M GFF+QA VTG+GPV+NL HL++P NN Sbjct: 174 DPLYPGESFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNN 241
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21 Identity = 46/68 (67.65%), Postives = 55/68 (80.88%), Query Frame = -3 Query: 502 DKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 705 D L+PGG FDPLGLA DP+ F LKVKE+K GRLAM +M GFF+QA VTG+GP+ENLA H++DP NN Sbjct: 186 DPLYPGGSFDPLGLADDPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNN 253
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20 Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = -3 Query: 502 LHPGGP-FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 699 L+PGG FDPLGLA DP FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL DP ANN Sbjct: 190 LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20 Identity = 49/67 (73.13%), Postives = 55/67 (82.09%), Query Frame = -3 Query: 502 LHPGGP-FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANN 699 L+PGG FDPLGLA DP FA LKVKEIKNGRLAMF+M GFF+QA VTG+GP+ENL HL +P ANN Sbjct: 187 LYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17 Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = -3 Query: 493 DKLHPGGP-FDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 705 D +PGGP F+PLG KD LK+KEIKNGRLAM A+LG+F+QA VTG GP +NL HL+DP NN+LT Sbjct: 197 DPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLT 268
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.247e-17 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = -3 Query: 487 EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQ--AYVTGEGPVENLAKHLSDPFANNLLTVI 708 E K +PGG FDPLG +KDP +F LKVKEIKNGRLA+ A++GF +Q AY+ G GP+ENLA HL+DP+ NN+ VI Sbjct: 164 EKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYL-GTGPLENLATHLADPWHNNIGDVI 238
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = -3 Query: 487 EDKLHPGGPFDPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFL-QAYVTGEGPVENLAKHLSDPFANNLLTVI 708 E K +PGG FDPLG +KDP +F LK+KEIKNGRLAM A +GF + Q+ G GP+ENLA HL+DP+ NN+ ++ Sbjct: 163 EKKKYPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIV 237
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16 Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = -3 Query: 493 HPGGPF-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLT 696 +PGGPF +PLG KD LK+KE+KNGRLAM A+LG+F+Q VTG GP +NL H++DP NN+LT Sbjct: 202 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLT 270
BLAST of CX671476 vs. ExPASy Swiss-Prot
Match: CB4A_ARATH (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 41/78 (52.56%), Postives = 54/78 (69.23%), Query Frame = -3 Query: 478 EDKLHPGGPF-DPLGLAKDPDQFALLKVKEIKNGRLAMFAMLGFFLQAYVTGEGPVENLAKHLSDPFANNLLTVISGN 708 E +L+PGG F DPLGLA DP++ A L++ EIK+ RLAM A LGF +QA TG+GP+ N A HLSDP ++ S + Sbjct: 213 EKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290 The following BLAST results are available for this feature:
BLAST of CX671476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671476 ID=CX671476; Name=CX671476; organism=Citrus sinensis; type=EST; length=710bpback to top |