CX671473

Overview
NameCX671473
Unique NameCX671473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length683
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10080 contig Csv1_Contig10080:180..861. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_SYNP2 (Ferredoxin--NADP reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=petH PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.188e-38
Identity = 87/184 (47.28%), Postives = 119/184 (64.67%), Query Frame = 3
Query:  192 GGRVVSVR-----AQVTTEAPAKVEKES-------------KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-EDGEIVKGVCSNFLCDLKPGA-EVKITGPVGKEMLMPRD 680
            GG++VS+R     AQ+ +E  +  +  +             K  +  V VN ++PKTP++G+C+ N ++  +   G   H+ F  +EG++ Y EGQSIG+I  G DKNGKPHKLRLYSIAS+  GD  D+KTVSLCV++L Y + E GE V GVCS +LC+L  G  +VKITGPVGKEML+P D
Sbjct:   65 GGKIVSIRPAEDAAQIVSEGQSSAQASAQSPMASSTKIVHPKTTDTSVPVNIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKITGPVGKEMLLPDD 248          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_SPISP (Ferredoxin--NADP reductase OS=Spirulina sp. GN=petH PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.896e-38
Identity = 78/134 (58.21%), Postives = 97/134 (72.39%), Query Frame = 3
Query:  285 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEG-EVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-EDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 680
            VN +KPK PYIG+CL N ++  +   G   H++F   G ++ Y EGQSIG+I  G D NGKPHKLRLYSIAS+  GD  D KTVSLCV++L Y + E GE V GVCS +LC+L+ GA+V ITGPVGKEML+P D
Sbjct:    7 VNIYKPKNPYIGKCLSNEELVREGGTGTVRHLIFDISGGDLRYLEGQSIGIIPPGTDNNGKPHKLRLYSIASTRHGDHVDDKTVSLCVRQLEYKHPETGETVYGVCSTYLCNLEAGADVAITGPVGKEMLLPED 140          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_THEEB (Ferredoxin--NADP reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=petH PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37
Identity = 85/175 (48.57%), Postives = 111/175 (63.43%), Query Frame = 3
Query:  192 GGRVVSVRAQVTTEAPAKVEKES---------KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEG-EVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-EDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            GG++VS++    T AP     E          K+ +  + VN ++P  P IG+ + N ++  +   G   H++F   G E+ Y EGQSIG+I  G D NGKPHKLRLYSIAS+  GDF D KTVSLCV+RL Y + E GE + GVCS++L  L+PG EVKITGPVGKEML+  DP
Sbjct:   58 GGKIVSIQPLNGTVAPLAATTEPAANNGAAPVKEKKVDIPVNIYRPNNPCIGKVISNEELVREGGEGTVKHIIFDISGTELRYLEGQSIGIIPAGTDANGKPHKLRLYSIASTRHGDFQDDKTVSLCVRRLEYKDKETGETIYGVCSSYLNQLQPGDEVKITGPVGKEMLLSDDP 232          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_ANASP (Ferredoxin--NADP reductase OS=Anabaena sp. (strain PCC 7120) GN=petH PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.739e-35
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  255 ESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-EDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            ++K     V VN ++P  P+IG+ + N  +  +   G   H+ F  T G + Y EGQSIG+I  GVDKNGKP KLRLYSIAS+  GD  D KT+SLCV++L Y + E GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP
Sbjct:  139 QAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDP 283          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_ANASO (Ferredoxin--NADP reductase OS=Anabaena sp. (strain PCC 7119) GN=petH PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.739e-35
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  255 ESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-EDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            ++K     V VN ++P  P+IG+ + N  +  +   G   H+ F  T G + Y EGQSIG+I  GVDKNGKP KLRLYSIAS+  GD  D KT+SLCV++L Y + E GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP
Sbjct:  139 QAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDP 283          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR_ANAVT (Ferredoxin--NADP reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=petH PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.577e-35
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  255 ESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN-EDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 683
            ++K     V VN ++P  P+IG+ + N  +  +   G   H+ F  T G + Y EGQSIG+I  GVDKNGKP KLRLYSIAS+  GD  D KT+SLCV++L Y + E GE V GVCS +L  ++PG+EVKITGPVGKEML+P DP
Sbjct:  139 QAKAKHADVPVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPETGETVYGVCSTYLTHIEPGSEVKITGPVGKEMLLPDDP 283          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR2_TOBAC (Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 9.741e-33
Identity = 83/189 (43.92%), Postives = 106/189 (56.08%), Query Frame = 3
Query:  132 ISPDRITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 680
            IS   I LK  P      S    +V +  Q  ++A   V   S +  +   +N +KPK PY    +   ++ G  APGET H+V   +G +PY EGQS GVI  G +  K G PH +RLY IAS+  GD  D KT SLCV+R VY    T ++     GVCSNFLCD KPG +VKITGP GK ML+P +
Sbjct:   40 ISMPPIDLKAAP------SRNQHIVCMSVQQASKAKVSVSPLSLEDAKEPPLNIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLPYWEGQSYGVIPPGENPKKPGNPHNVRLYLIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKVKITGPSGKIMLLPEE 222          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FNRR1_ARATH (Ferredoxin--NADP reductase, root isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=RFNR1 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.272e-32
Identity = 73/138 (52.90%), Postives = 89/138 (64.49%), Query Frame = 3
Query:  285 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 680
            +N F+PK PY    +   +I G  APGET H+V   +G VPY EGQS GVI  G +  K G PH +RLYSIAS+  GD  D KT SLCV+R +Y    T ++     GVCSNFLC+ KPG +VKITGP GK ML+P D
Sbjct:   87 LNLFRPKEPYTATIVSVERIVGPQAPGETCHIVIDHDGNVPYWEGQSYGVIPPGENPKKPGAPHNVRLYSIASTRYGDSFDGKTASLCVRRAIYYDPETGKEDPSKAGVCSNFLCNAKPGDKVKITGPSGKVMLLPED 224          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FENR2_PEA (Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Pisum sativum PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.834e-32
Identity = 76/157 (48.41%), Postives = 96/157 (61.15%), Query Frame = 3
Query:  228 TEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 680
            T +P ++E  S+       +N  KPK PY    +   ++ G  APGET H+V + +G VPY EGQS GVI  G +  K G PH +RLYSIAS+  GD  D KT SLCV+R VY    T ++     GVCSNFLCD KPG ++KI GP GK ML+P D
Sbjct:   72 TVSPLELENPSEPP-----LNLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVPYWEGQSYGVIPPGENPKKPGSPHNVRLYSIASTRYGDNFDGKTASLCVRRAVYYDPVTGKEDPSKNGVCSNFLCDSKPGDKIKIAGPSGKIMLLPED 223          
BLAST of CX671473 vs. ExPASy Swiss-Prot
Match: FNRR2_ARATH (Ferredoxin--NADP reductase, root isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=RFNR2 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.314e-32
Identity = 72/140 (51.43%), Postives = 91/140 (65.00%), Query Frame = 3
Query:  285 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNEDGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPR-DP 683
            +N +KPK  Y  + +   ++ G  APGET H+V   +G +PY EGQS GVI  G +  K G PH +RLYSIAS+  GDF D KT SLCV+R VY    T ++     GVCSNFLCD KPG +++ITGP GK ML+P  DP
Sbjct:   91 LNLYKPKESYTAKIVSVERVVGPKAPGETCHIVIDHDGNLPYWEGQSYGVIPPGENPKKPGAPHNVRLYSIASTRYGDFFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKIQITGPSGKVMLLPESDP 230          
The following BLAST results are available for this feature:
BLAST of CX671473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR_SYNP21.188e-3847.28Ferredoxin--NADP reductase OS=Synechococcus sp. (s... [more]
FENR_SPISP5.896e-3858.21Ferredoxin--NADP reductase OS=Spirulina sp. GN=pet... [more]
FENR_THEEB1.715e-3748.57Ferredoxin--NADP reductase OS=Thermosynechococcus ... [more]
FENR_ANASP2.739e-3553.10Ferredoxin--NADP reductase OS=Anabaena sp. (strain... [more]
FENR_ANASO2.739e-3553.10Ferredoxin--NADP reductase OS=Anabaena sp. (strain... [more]
FENR_ANAVT3.577e-3553.10Ferredoxin--NADP reductase OS=Anabaena variabilis ... [more]
FENR2_TOBAC9.741e-3343.92Ferredoxin--NADP reductase, root-type isozyme, chl... [more]
FNRR1_ARATH1.272e-3252.90Ferredoxin--NADP reductase, root isozyme 1, chloro... [more]
FENR2_PEA4.834e-3248.41Ferredoxin--NADP reductase, root isozyme, chloropl... [more]
FNRR2_ARATH6.314e-3251.43Ferredoxin--NADP reductase, root isozyme 2, chloro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11C08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C08-F15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671473 ID=CX671473; Name=CX671473; organism=Citrus sinensis; type=EST; length=683bp
ACCCCTTTAAATTTTCTTCTCTCTTCATCTAAATTCTTCTTTATCATCAC
TTATCAATCATGGCTGCAGTGAGTGCTGCAGTTTCTCTTCCGACTTCCAA
GTCCACTTCGCTTCCAACCAGAACCTCTATCATCTCTCCTGACAGAATCA
CCTTAAAAAAGGTTCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGA
GTGGTTTCTGTCAGAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGA
GAAAGAGTCCAAGAAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAAC
CTAAGACACCTTACATTGGCAGATGCCTTTTAAACACTAAGATCACTGGT
GATGATGCTCCTGGAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGA
GGTTCCCTACAAAGAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTG
ACAAGAATGGGAAGCCTCACAAACTGAGATTATACTCCATTGCTAGCAGT
GCCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAG
GCTTGTGTACACCAACGAAGATGGAGAAATTGTTAAGGGAGTCTGCTCAA
ATTTCTTGTGTGACTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCT
GTTGGGAAAGAAATGCTCATGCCAAGGGATCCC
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