CX671466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBE2F_HUMAN (NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.592e-15 Identity = 49/150 (32.67%), Postives = 72/150 (48.00%), Query Frame = 3 Query: 180 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 608 K ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 35 KLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 184
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.716e-15 Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 3 Query: 279 IMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATAR 587 I+ P + Y G + F YP +PPKV K+FHPNI+ G++CL+IL+E WSPAL + ++ + L +PNP+DPL + A + + ++ R Sbjct: 67 IVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBE2W_MOUSE (Probable ubiquitin-conjugating enzyme E2 W OS=Mus musculus GN=Ube2w PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.547e-15 Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 3 Query: 180 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTK--VFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 503 KR+ KEL LQ DPP + V + W + G P + Y G F + F YPF P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPIHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBE2W_HUMAN (Probable ubiquitin-conjugating enzyme E2 W OS=Homo sapiens GN=UBE2W PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 46/112 (41.07%), Postives = 60/112 (53.57%), Query Frame = 3 Query: 180 KRILKELKDLQKDPPTSCSAGP--VAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVF--HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLT 503 KR+ KEL LQ DPP + V + W + G P + Y G F + F YPF P+V F + HP++ SNG ICL IL E WSPAL++ V LSI S+L+ Sbjct: 6 KRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTEDWSPALSVQSVCLSIISMLS 117
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 3 Query: 186 ILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 608 ++KE+ +L+ + P +C + H + P + Y GG F P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 37 LVKEVAELEANLPCTCKVHFPDPNKLHCFQLTVTPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBCX_PICPA (Ubiquitin-conjugating enzyme E2-24 kDa OS=Pichia pastoris GN=PEX4 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15 Identity = 58/194 (29.90%), Postives = 88/194 (45.36%), Query Frame = 3 Query: 174 ASKRILKELKDLQKDPPTSCSAG-----------PVAEDMFH-WQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRT----------------------------------KVFHPNINSN-GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-SDKAKYEATARSWTQKYAM 611 A KR+L+E + + K+ SA PV+ED F+ W A + GP D+ Y + + I P +YP +PPK F ++ HPNI N G ICLDIL+ +W+PA T+S L +I LL DP P PL ++A++ K +D Y + + +Y++ Sbjct: 3 AEKRLLQEYRSILKEQRQKGSASTLSSNGILDLKPVSEDNFYKWTAKLKGPTDTGYQDAFWELQIDIPSNYPTQPPKFTFIVSDDIPRNRRQRQTNQIQDDDEFEGAEKEVLRHCYRMPHPNIAFNTGEICLDILQAKWTPAWTLSSALTAIVLLLNDPEPLSPLDIDMANLMKINDLKAYNSLIEYYVGRYSI 196
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.051e-15 Identity = 49/153 (32.03%), Postives = 72/153 (47.06%), Query Frame = 3 Query: 171 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 608 M K ++ E+ +L+ + P +C + H + P + Y GG F I P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DPL E A + DK + + ++YA Sbjct: 32 MRDKLLVTEVAELEANLPWTCKVHFPDPNKLHCFQLTVSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRRYA 184
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 3 Query: 183 RILKE----LKDLQKDPPTSC-------SAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINS-NGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-SDKAKYEATAR 587 RI+KE LK L D P + S P+ E D+ W+A I GP D+PY F + I P YP PPK++F + + H N+ S G ICL+ILK E+W+P + + ++ LL +P D PL +I ++ + D + Y+ + Sbjct: 21 RIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVK 171
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBC6_KLULA (Ubiquitin-conjugating enzyme E2 6 OS=Kluyveromyces lactis GN=UBC6 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 41/116 (35.34%), Postives = 61/116 (52.59%), Query Frame = 3 Query: 165 SIMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICL---DILKEQWSPALTISKVLLSICSLLT 503 SI A+KR+ KE K++ +PP A P +++ W I GPP +PY G + T+ FP DYPF PP + T + N +CL D E W+PA ++ +L + S +T Sbjct: 3 SIQANKRLTKEYKNIVNNPPPFIIAAPHEDNILEWHYVITGPPSTPYENGQYHGTLTFPSDYPFNPPAIRMITP--NGRFKENTRLCLSMSDYHPEAWNPAWSVVTILNGLLSFMT 116
BLAST of CX671466 vs. ExPASy Swiss-Prot
Match: UBC32_ARATH (Ubiquitin carrier protein E2 32 OS=Arabidopsis thaliana GN=UBC32 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.903e-15 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 3 Query: 174 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 512 A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++ I P DYPFKPP T + +N ICL I E W P+ ++ L+++ + + T PN Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPN 126 The following BLAST results are available for this feature:
BLAST of CX671466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671466 ID=CX671466; Name=CX671466; organism=Citrus sinensis; type=EST; length=731bpback to top |