CX671465

Overview
NameCX671465
Unique NameCX671465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length860
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBE2S_DROER (Ubiquitin-conjugating enzyme E2 S OS=Drosophila erecta GN=GG18165 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.040e-23
Identity = 58/156 (37.18%), Postives = 82/156 (52.56%), Query Frame = -3
Query:  211 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYAMG*LFGYCRNGTH 678
            +++++EL++++  PP          D+   QA I GP  +PYA GVF V +    D+P  PPK  F TK+FHPN+ +NG IC++ LK+ W P L I  +LL+I  LL  PNP+  L  E   M       Y   AR  T+ +A       C  G H
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHAQP---AKCGAGAH 169          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBE2S_DROYA (Ubiquitin-conjugating enzyme E2 S OS=Drosophila yakuba GN=GE15576 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = -3
Query:  250 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 678
            +++++EL++++  PP          D+   QA I GP  +PYA GVF V +    D+P  PPK  F TK+FHPN+ +NG IC++ LK+ W P L I  +LL+I  LL  PNP+  L  E   M       Y   AR  T+ +A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGVFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.889e-23
Identity = 55/153 (35.95%), Postives = 85/153 (55.56%), Query Frame = -3
Query:  250 MASKRILKELKDLQKDPPTSCSAGPVAE-----DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 687
            +A  R+ +E K  +KD P    A P        ++ +W+  I G   +P+ GG+F + + F  DYP  PPK  F   +FHPN+  +G++CL IL+E   W PA+TI ++LL I  LL +PN  DP   E   +Y  ++ +YE   R+  +K+A
Sbjct:    4 IALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQDPAQAEAYTIYCQNRVEYEKRVRAQAKKFA 156          
BLAST of CX671465 vs. ExPASy Swiss-Prot
Match: UBE2S_DROAN (Ubiquitin-conjugating enzyme E2 S OS=Drosophila ananassae GN=GF21161 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.030e-22
Identity = 54/143 (37.76%), Postives = 79/143 (55.24%), Query Frame = -3
Query:  250 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYEATARSWTQKYA 678
            +++++EL++++  PP          D+   QA I GP  +PYA G+F V +    D+P  PPK  F TK+FHPN+ +NG IC++ LK+ W P L I  +LL+I  LL  PNP+  L  E   M       Y   AR  T+ +A
Sbjct:   17 RQVMRELQEMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAAGIFRVKLTLNKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTEIHA 159          
The following BLAST results are available for this feature:
BLAST of CX671465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UBE2S_DROER6.040e-2337.18Ubiquitin-conjugating enzyme E2 S OS=Drosophila er... [more]
UBE2S_DROYA7.889e-2338.46Ubiquitin-conjugating enzyme E2 S OS=Drosophila ya... [more]
UBC9_XENTR7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_HUMAN7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK7.889e-2335.95SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBE2S_DROAN1.030e-2237.76Ubiquitin-conjugating enzyme E2 S OS=Drosophila an... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11C04_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C04-F7-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671465 ID=CX671465; Name=CX671465; organism=Citrus sinensis; type=EST; length=860bp
TTCGGTGCAAAAATAATGAAAGTATTTTTAGGACAACAAACTACATTGAA
TGATAGGAGTTTCAAACAATAAACATTCAACATTAACAAAATCGTCTTGC
CCTTGCAACTCCTCCCCAAACATCCTTCCTCATTACTAAAATACAAAACA
TCCCCTTCCCGAAGCAAGATTGAAGAAAAAGGAGAAAAAAACACAACATA
TTTCATATAAATGAGTTCCATTTCTGCAATATCCAAACAACTATCCCATG
GCATACTTCTGTGTCCAGCTCCTGGCAGTGGCTTCATATTTGGCCTTGTC
GGACTTGTACATGTGAGCAATCTCCGGTACAAGCGGGTCGTCAGGATTTG
GGTCAGTAAGCAACGAGCAGATAGAAAGCAGGACCTTTGAAATGGTAAGA
GCTGGGCTCCACTGTTCTTTAAGGATATCAAGACATATGCTTCCATTGCT
GTTGATGTTTGGGTGGAAGACCTTGGTCCTAAAAGCAACCTTTGGGGGCT
TGAAGGGATAATCTGGAGGAAAATGAATGGTAACCAAAAATACACCTCCT
GCATATGGACTATCAGGGGGGCCCATAATTGTTGCTTGCCAATGGAACAT
GTCTTCAGCCACCGGACCAGCGCTGCAAGACGTGGGAGGATCCTTCTGCA
AATCCTTGAGTTCCTTCAAAATACGCTTCGAAGCCATGATGCTTCAACGG
ATTATTAAAAGTTAAAGCCACAACAAACCTAGGATCTGCAACACTTGTGC
GGCGAAGAAGGAGATCGGAGGGCAATAGCAGTGAGAAAGGGGAACGGCTT
CGGAGCAGATCTGCGGCGGCTACTGGCCGTCCCGACCTCTCTCCTCTACA
ATCTCTTCCT
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