CX671462

Overview
NameCX671462
Unique NameCX671462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_COCIM (Histone H2B OS=Coccidioides immitis GN=HTB1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   48 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 137
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_CHAGB (Histone H2B OS=Chaetomium globosum GN=HTB1 PE=3 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   46 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 135
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_ASPTN (Histone H2B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=htb1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   49 ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_ASPOR (Histone H2B OS=Aspergillus oryzae GN=htb1 PE=3 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   50 ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 139
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_ASPNC (Histone H2B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=htb1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   50 ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 139
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_ASPFU (Histone H2B OS=Aspergillus fumigatus GN=htb1 PE=3 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   49 ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_ASPCL (Histone H2B OS=Aspergillus clavatus GN=htb1 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   49 ETYSSYIYKVLKQVHPDTGISTRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 138
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2B_AJECA (Histone H2B OS=Ajellomyces capsulata GN=HTB1 PE=3 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.898e-34
Identity = 70/90 (77.78%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQVHPD GIS++AM I+NSF+NDIFE++A EAS+LA YNKK TI+SREIQT+VRL+LPGELAKHAVSEGTKAVTK++SS
Sbjct:   47 ETYSSYIYKVLKQVHPDTGISNRAMSILNSFVNDIFERVATEASKLAAYNKKSTISSREIQTSVRLILPGELAKHAVSEGTKAVTKYSSS 136
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: H2BS1_STRPU (Histone H2B.1, sperm OS=Strongylocentrotus purpuratus PE=3 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.649e-34
Identity = 68/90 (75.56%), Postives = 83/90 (92.22%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            E+Y IYI+KVLKQVHPD GISS+ M IMNSF+ND+FE++A EASRL +YN++ T++SREIQTAVRL+LPGELAKHAVSEGTKAVTK+T+S
Sbjct:   50 ESYGIYIYKVLKQVHPDTGISSRGMSIMNSFVNDVFERVAAEASRLTKYNRRSTVSSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTS 139
[Close]
BLAST of CX671462 vs. ExPASy Swiss-Prot
Match: HSB1_PICST (Histone H2B.1 OS=Pichia stipitis GN=HTB1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.684e-34
Identity = 69/90 (76.67%), Postives = 81/90 (90.00%), Query Frame = 3 
Query:  240 ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 509
            ETY  YI+KVLKQ HPD GIS KAM IMNSF+NDIFE++A EAS+LA YNKK TI++REIQTAVRL+LPGELAKHAVSEGT+AVTK++S+
Sbjct:   40 ETYSSYIYKVLKQTHPDTGISQKAMSIMNSFVNDIFERIASEASKLAAYNKKSTISAREIQTAVRLILPGELAKHAVSEGTRAVTKYSSA 129
The following BLAST results are available for this feature:
BLAST of CX671462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
H2B_COCIM3.898e-3477.78Histone H2B OS=Coccidioides immitis GN=HTB1 PE=3 S... [more]
H2B_CHAGB3.898e-3477.78Histone H2B OS=Chaetomium globosum GN=HTB1 PE=3 SV... [more]
H2B_ASPTN3.898e-3477.78Histone H2B OS=Aspergillus terreus (strain NIH 262... [more]
H2B_ASPOR3.898e-3477.78Histone H2B OS=Aspergillus oryzae GN=htb1 PE=3 SV=... [more]
H2B_ASPNC3.898e-3477.78Histone H2B OS=Aspergillus niger (strain CBS 513.8... [more]
H2B_ASPFU3.898e-3477.78Histone H2B OS=Aspergillus fumigatus GN=htb1 PE=3 ... [more]
H2B_ASPCL3.898e-3477.78Histone H2B OS=Aspergillus clavatus GN=htb1 PE=3 S... [more]
H2B_AJECA3.898e-3477.78Histone H2B OS=Ajellomyces capsulata GN=HTB1 PE=3 ... [more]
H2BS1_STRPU6.649e-3475.56Histone H2B.1, sperm OS=Strongylocentrotus purpura... [more]
HSB1_PICST8.684e-3476.67Histone H2B.1 OS=Pichia stipitis GN=HTB1 PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11C01_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11C01-F1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671462 ID=CX671462; Name=CX671462; organism=Citrus sinensis; type=EST; length=792bp
TTTACTCTTATCCTTTCGAAGAAAAAAGAAAAGAAAATATCTACAAGCCT
TACCTTACCAAACCGAAATTAATGGCACCAAAGGCGGAGAAGAAGCCGGC
TGAGAAGAAGCCAGCGGAGGAGAAGAAGACATCGGTGGCCGAGAAGGCGC
CGGCGGAGAAGAAGCCGAAGGCCGGCAAGAAGCTTCCCAAAGAAGCCGCC
TCTGGCGACAAGAAGAAGAAGCGCGCGAAGAAGAGTATCGAGACTTACAA
GATTTACATCTTCAAAGTCCTGAAGCAGGTACATCCCGATATCGGAATCT
CGAGCAAGGCCATGGGAATCATGAACAGTTTCATCAACGATATTTTCGAG
AAGCTTGCCCAGGAAGCTTCTAGGCTTGCAAGGTACAATAAGAAGCCGAC
GATTACATCTCGGGAAATTCAGACCGCTGTGAGACTTGTACTTCCTGGTG
AGCTGGCTAAGCACGCTGTTTCTGAGGGTACCAAAGCTGTTACTAAGTTT
ACTTCTTCTTGAAGGAAGTTTGTTGCATCGGTCGGTGGATTCGGGTGTTA
TGTGATTTGTGTAGTTAGTAGTTTAGGCCTTTAATTTTACTAGATGAAGT
CGTTTTATGTTTTTTGTTTTTAAATCTTTGTTGGATTTTTAGGGTTTGTT
TGGATGTACTAGAAATTTGGACCTGATCCGGGTGATGTGCATGTTCATTA
TGTTAGAATATGAAAATGAAATATGATTTAAGGAAGAAACCAAACAGAAG
AGAGAGAAAAAGGGAAAGAGGGAAGAAGGAGAGAGAGAGAGA
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