CX671456

Overview
NameCX671456
Unique NameCX671456
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA2_ORYSJ (Glutamine synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=GLN2 PE=1 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.662e-80
Identity = 140/174 (80.46%), Postives = 153/174 (87.93%), Query Frame = -1
Query:  253 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 774
            GINISG NGEVMPGQWE+QVGP+VGI AGD +W++RYILERITE AGVVL+ D KPIQGDWNGAG H NYSTKSMR DGGFEVIKKAI  L LRH  HI+AYGEGNERRLTG HETA I+ F WGVANRG SIRVGRDTE +GKGY EDRRPASNMDPYVVT+++AETTILW+P
Sbjct:  239 GINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQGDWNGAGCHTNYSTKSMREDGGFEVIKKAILNLSLRHDLHISAYGEGNERRLTGLHETASIDNFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYVVTALLAETTILWEP 412          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNAC_MAIZE (Glutamine synthetase, chloroplastic OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.930e-80
Identity = 138/174 (79.31%), Postives = 152/174 (87.36%), Query Frame = -1
Query:  253 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 774
            GINISG NGEVMPGQWE+QVGP+VGI AGD +W++RYILERITE AGVVL+ D KPIQGDWNGAG H NYSTK+MR DGGFE IK+AI  L LRH  HI+AYGEGNERRLTGKHETA I TF WGVANRG SIRVGRDTE +GKGY EDRRPASNMDPY+VT ++AETTILW+P
Sbjct:  234 GINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWISRYILERITEQAGVVLTLDPKPIQGDWNGAGCHTNYSTKTMREDGGFEEIKRAILNLSLRHDLHISAYGEGNERRLTGKHETASIGTFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYIVTGLLAETTILWQP 407          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA2_HORVU (Glutamine synthetase leaf isozyme, chloroplastic OS=Hordeum vulgare PE=2 SV=2)

HSP 1 Score: 290.426 bits (742), Expect = 7.249e-78
Identity = 137/174 (78.74%), Postives = 149/174 (85.63%), Query Frame = -1
Query:  253 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 774
            GI ISG NGEVMPGQWE+QVGP+VGI AGD +W +RYILERITE AGVVL+ D KPIQGDWNGAG H NYST SMR DGGF+VIKKAI  L LRH  HIAAYGEGNERRLTG HETA I+ F WGVANRG SIRVGRDTE +GKGY EDRRPASNMDPY VT+++AETTILW+P
Sbjct:  245 GIEISGTNGEVMPGQWEYQVGPSVGIDAGDHIWASRYILERITEQAGVVLTLDPKPIQGDWNGAGCHTNYSTLSMREDGGFDVIKKAILNLSLRHDLHIAAYGEGNERRLTGLHETASISDFSWGVANRGCSIRVGRDTEAKGKGYLEDRRPASNMDPYTVTALLAETTILWEP 418          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.200e-64
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = -1
Query:  376 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASI 774
            GINISGIN EVMPGQWEFQVGP++GISAGD+LWVARYILERITEIAGVVLS D KPI GDWNGAGAH NYSTKSMRNDGG+EVIK+AIEKL  RH+EHIAAYGEGNERRLTG+HETADI+TF WGVANRGASI
Sbjct:  183 GINISGINAEVMPGQWEFQVGPSIGISAGDELWVARYILERITEIAGVVLSLDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEVIKQAIEKLEKRHNEHIAAYGEGNERRLTGRHETADISTFSWGVANRGASI 315          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.124e-62
Identity = 117/171 (68.42%), Postives = 131/171 (76.61%), Query Frame = -1
Query:  262 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTIL 774
            GINISGIN EVMP QWEFQVGP  GIS GD LW+ARY+L RI E   V +SF  KP+QGDWNGAG H NYSTK+MR  GG +VI++AIEKL  RH EHIA YGE N+ RLTG+HET  I  F  GVANRGASIRV R    +G GY EDRRPASN+DPY VTS+I ETT+L
Sbjct:  182 GINISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWAVKVSFHPKPLQGDWNGAGCHTNYSTKAMREPGGMKVIEEAIEKLSKRHDEHIAVYGEDNDLRLTGRHETGHIGAFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTSIIVETTLL 352          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA_AMAMU (Glutamine synthetase OS=Amanita muscaria GN=GLN1 PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.124e-62
Identity = 118/173 (68.21%), Postives = 131/173 (75.72%), Query Frame = -1
Query:  256 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 774
            G+NISGIN EVMP QWEFQVGP  GIS GD LW+ARY+L R+ E  GV +SF  KP+QGDWNGAGAH NYST +MR  GG + I+ AIEKL  RH EHIA YGE NE RLTG+HET  I TF  GVANRGASIRV R    +G GY EDRRPASN+DPY VT +I ETTIL K
Sbjct:  182 GVNISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLIRVAEQWGVKVSFHPKPLQGDWNGAGAHTNYSTLAMREPGGMKYIEAAIEKLAKRHDEHIAVYGEDNEMRLTGRHETGHIGTFSSGVANRGASIRVPRHVANKGYGYLEDRRPASNIDPYRVTGIIIETTILDK 354          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.270e-62
Identity = 117/173 (67.63%), Postives = 133/173 (76.88%), Query Frame = -1
Query:  256 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 774
            GINISGIN EVMP QWEFQVGP  GIS GD LW+ARY+L RI E  GV +SF  KP++G+WNGAG H N+STK+MR  GG + I+ AIEKL  RH EHIA YGE N+ RLTG+HET  I+ F  GVANRGASIRV R    +G GY EDRRPASN+DPY VTS+IAETTIL K
Sbjct:  182 GINISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWGVKVSFHPKPLKGEWNGAGCHTNFSTKAMREAGGMKFIEDAIEKLAKRHDEHIAVYGEDNDLRLTGRHETGHISNFSSGVANRGASIRVPRHVASQGYGYLEDRRPASNIDPYRVTSIIAETTILDK 354          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA_CANGA (Glutamine synthetase OS=Candida glabrata GN=GLN1 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.767e-61
Identity = 112/168 (66.67%), Postives = 130/168 (77.38%), Query Frame = -1
Query:  271 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 774
            GINISGIN EVMP QWEFQVGP  GIS GDQLW+ARY L R+ E  GV +SF  KP++GDWNGAG H N STK MR  GG + I++AIEKL  RH+EHI  YG  NE+RLTG+HETA + +F  GVANRGASIR+ R   KEG GYFEDRRPASN+DPY+VT ++ ET
Sbjct:  184 GINISGINAEVMPSQWEFQVGPCEGISMGDQLWMARYFLHRVAEEFGVKISFHPKPLKGDWNGAGCHTNVSTKDMRVPGGMKYIEQAIEKLSKRHNEHIKLYGADNEQRLTGRHETASMTSFSSGVANRGASIRIPRPVAKEGFGYFEDRRPASNIDPYLVTGIMCET 351          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.721e-61
Identity = 114/173 (65.90%), Postives = 129/173 (74.57%), Query Frame = -1
Query:  256 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWK 774
            G+NISGIN EVMP QWEFQVGP  GIS GD LW+ARY+L RI E  G+ +SF  KP+ GDWNGAG H NYSTK MR  GG + I +AIEKL  RH+EHIA YGE N+ RLTG+HET  I  F  GVANRGASIRV R    +G GY EDRRPASN+DPY VT +I ETT+L K
Sbjct:  182 GVNISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWGIKVSFHPKPLAGDWNGAGCHTNYSTKVMREPGGMKYIDEAIEKLSKRHAEHIAVYGEDNDLRLTGRHETGHIGDFSSGVANRGASIRVPRHVAAQGYGYLEDRRPASNIDPYRVTGIIVETTVLDK 354          
BLAST of CX671456 vs. ExPASy Swiss-Prot
Match: GLNA_YARLI (Glutamine synthetase OS=Yarrowia lipolytica GN=GLN1 PE=3 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 6.165e-61
Identity = 109/168 (64.88%), Postives = 128/168 (76.19%), Query Frame = -1
Query:  271 GINISGINGEVMPGQWEFQVGPAVGISAGDQLWVARYILERITEIAGVVLSFDLKPIQGDWNGAGAHANYSTKSMRNDGGFEVIKKAIEKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAET 774
            GINISGIN EVMP QWE+QVGP  GIS  D+LW++RY+L R+ E  G+ +SF  KP+QGDWNGAG H N STKSMR  GG + I+ AIEKL  RH EHIA YGE N+ RLTG+HET  I +F  GVANRG SIR+ R   KEG GYFEDRRPASN+DPY+VT ++ ET
Sbjct:  175 GINISGINAEVMPSQWEYQVGPCEGISMADELWMSRYLLHRVAEEFGIKISFHPKPLQGDWNGAGCHTNVSTKSMREPGGMKHIEAAIEKLAARHKEHIAVYGEDNDMRLTGRHETGSIGSFSSGVANRGCSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMTET 342          
The following BLAST results are available for this feature:
BLAST of CX671456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GLNA2_ORYSJ2.662e-8080.46Glutamine synthetase, chloroplastic OS=Oryza sativ... [more]
GLNAC_MAIZE5.930e-8079.31Glutamine synthetase, chloroplastic OS=Zea mays GN... [more]
GLNA2_HORVU7.249e-7878.74Glutamine synthetase leaf isozyme, chloroplastic O... [more]
GLNA3_LUPAN1.200e-6487.97Glutamine synthetase nodule isozyme (Fragment) OS=... [more]
GLNA_HEBCY1.124e-6268.42Glutamine synthetase OS=Hebeloma cylindrosporum GN... [more]
GLNA_AMAMU1.124e-6268.21Glutamine synthetase OS=Amanita muscaria GN=GLN1 P... [more]
GLNA_AGABI4.270e-6267.63Glutamine synthetase OS=Agaricus bisporus GN=glnA ... [more]
GLNA_CANGA2.767e-6166.67Glutamine synthetase OS=Candida glabrata GN=GLN1 P... [more]
GLNA_SUIBO4.721e-6165.90Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_YARLI6.165e-6164.88Glutamine synthetase OS=Yarrowia lipolytica GN=GLN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B08_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B08-D15-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671456 ID=CX671456; Name=CX671456; organism=Citrus sinensis; type=EST; length=774bp
TTTTGAACAAAAGGAATTGACCCTTCCATAATGTTATTAAATTAAATGTT
TACATTATTCAACCCAATAGGACAGCAGGAAGCAACGAACCCACTGTTGC
AAATACAGGGGCAGAGATTGAAACAAGACAAAAGCTGAACTACTACTAAT
AAAGCATCCTTAGCAGAACACAATTCTGTCGTGAACTCGTGAATCCTGAG
TAAAGCCAGCAGATCAAACAAAATATTTCAAAGGTTGCTAGAGGAGCATT
CATGGCTTCCACAGAATAGTGGTTTCTGCAATCATGGAGGTGACAACATA
TGGATCCATGTTAGAAGCAGGTCTCCTGTCCTCAAAGTAACCCTTTCCTT
CTTTCTCTGTGTCTCGTCCAACACGGATTGATGCCCCACGGTTAGCAACA
CCCCATTTGAAAGTGTTGATGTCAGCTGTTTCATGTTTGCCAGTGAGTCG
GCGTTCATTGCCTTCACCATATGCGGCAATGTGCTCACTGTGCCTCAGTC
CAAGTTTCTCAATTGCTTTCTTAATAACCTCAAAGCCTCCATCGTTCCTC
ATCGACTTGGTGCTGTAATTTGCGTGAGCACCAGCTCCATTCCAGTCACC
CTGAATTGGCTTGAGATCGAAAGAAAGCACAACTCCAGCAATCTCTGTAA
TCCTCTCTAAAATATAGCGGGCAACCCACAACTGATCTCCAGCAGAAATT
CCAACAGCGGGACCAACTTGGAACTCCCACTGCCCCGGCATGACTTCTCC
ATTGATGCCACTGATGTTGATTCC
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