CX671453

Overview
NameCX671453
Unique NameCX671453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12464 contig Csv1_Contig12464:40..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_PSEE4 (50S ribosomal protein L15 OS=Pseudomonas entomophila (strain L48) GN=rplO PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 50/149 (33.56%), Postives = 78/149 (52.35%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +LN+L P PGS          I +G G + G G +GQ SRSG  +  GFEGGQ PL+RR+PK     G +         V L ++     +EGD +++++LK   +I     +    +KI+  GE+++ +  K  A +  A+  +EAAG
Sbjct:    2 KLNDLSPAPGSRREKHRPGRGIGSGLGKTGGRGHKGQTSRSGGSIAPGFEGGQQPLHRRLPKF----GFVSLKAMDRAEVRLSELAK---VEGDLITVQSLKDANVIG----QHVQRVKIMLSGEVTRAVTLKGIAVTKGARAAIEAAG 139          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_METNO (50S ribosomal protein L15 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplO PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.495e-14
Identity = 59/157 (37.58%), Postives = 86/157 (54.78%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEA---AGFLE-GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLT 702
            +LN +    G+          I +G+G + G G++GQK+R+G  + KGFEGGQMPL+RR+PK     G  + G      VN+  I+    AG L+    V++E L   G+++   R R   +KILG GELS KL F+    S SA   +E AG ++T
Sbjct:    2 KLNEIRDNEGATKNRMRVGRGIGSGKGKTAGRGVKGQKARTGVAI-KGFEGGQMPLHRRLPK----RGFTNPGATDLNEVNIGRIQQAVDAGKLDPSAPVTVEALLAAGIVS---RVRD-GVKILGVGELSAKLTFQVARASKSAVAAIEKAGGSVT 149          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_SINMW (50S ribosomal protein L15 OS=Sinorhizobium medicae (strain WSM419) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14
Identity = 55/159 (34.59%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE----GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +LN +    G+          I +G G + G G++GQK+RSG  +  GFEGGQMP+YRR+PK     G  +    ++V V+L  I+AA   +       V    LK  G+I    R  K  +++L DGEL  K++ +    S  A EK+E AG ++ +L
Sbjct:    2 KLNEIKDNEGATKNRKRLGRGIGSGSGKTAGRGVKGQKARSGVSIN-GFEGGQMPIYRRLPK----RGFNNIFASEFVVVSLGRIQAAVDAKKLDASKTVDAAALKAAGVI----RRVKDGVRVLADGELKAKVSLEVAGASKPAIEKIEKAGGSIKLL 151          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_SACD2 (50S ribosomal protein L15 OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14
Identity = 53/150 (35.33%), Postives = 76/150 (50.67%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKY-VPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            RLN L P PG           I +G G + G G +G KSRSG  V+ GFEGGQMPL +R+PK      G  + + +    V L ++     +E D + +E L+   LI+ + +  K+ L     GEL+K +  K    +  AK  +EAAG
Sbjct:    2 RLNTLSPAPGRVSAKKRVGRGIGSGLGKTAGRGHKGLKSRSGGSVKPGFEGGQMPLQKRLPKF-----GFTSRISRVTAEVRLAELNK---VEADIIDIEALRAADLIDNNIKRAKVFL----SGELTKAVTIKGLMVTKGAKAAIEAAG 139          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_PHYAS (50S ribosomal protein L15 OS=Phytoplasma australiense GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14
Identity = 56/162 (34.57%), Postives = 81/162 (50.00%), Query Frame = 1
Query:  223 PVTNVRFRLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            PV N R     LG  PGS             G G + G G +GQ +RSG  +R GFEGGQ+P ++RIPK     G  +    KY  +NL  ++   F E   ++ + L +K +I    ++    +K+LG G L+KKL  KA  FS  A+  + A G  + V+
Sbjct:    7 PVANARKTTKRLGRGPGS-------------GTGKTSGKGHKGQLARSGKTLRPGFEGGQIPFFQRIPK----RGFHNFAQKKYAVLNLTTLQ--NFPEDSVITPQLLLEKKII----KDPLSGIKVLGQGTLTKKLVVKASKFSRQAEASILAVGGKIEVI 145          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_NITHX (50S ribosomal protein L15 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14
Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEG-DEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVLPGRK 720
            +L+++    GS          I +G+G + G G +GQ +RSG  + KGFEGGQMPL+RR+PK RG          +     L+D   AG ++    V+ E+L K G++    R  K  +++LG GE+  KL  +    S SA   +E AG T+ +L  +K
Sbjct:    2 KLSDIADNAGSRKKRMRIGRGIGSGKGKTGGRGGKGQTARSGVRI-KGFEGGQMPLHRRLPK-RGFNNIFRVEFAEINLDRLQDAIDAGSIDAKSTVNAESLVKSGVV----RRAKGGVRLLGRGEIKAKLTIEVHGASKSAIAAVEKAGGTVKILAPKK 155          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_MANSM (50S ribosomal protein L15 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14
Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = 1
Query:  247 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            LN L P  G+          I +G G + G G +GQKSR+G GVR+GFEGGQMPLYRR+PK     G           + L D+     +E + V+LE+LK   +I    +  K+ L     GE+   +  +    +  AK  +EAAG
Sbjct:    3 LNTLAPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGGGVRRGFEGGQMPLYRRLPKF----GFTSMKAAVTAEIRLNDLTK---VENNVVTLESLKAANIITKDIQFAKVVLA----GEVKGAVTVRGLRVTKGAKAAIEAAG 139          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_WIGBR (50S ribosomal protein L15 OS=Wigglesworthia glossinidia brevipalpis GN=rplO PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 53/153 (34.64%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  247 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDE--VSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTL 699
            LN + P   S          I +G+G + G G +GQ+SRSG  VR+GFEGGQMPLYRR+PK      G +     +     K+I+ + F++  +  + L  LKK  +IN     +   +KI+     +KK+N K    S +AK+++E  G T+
Sbjct:    3 LNTISPMKKSNHSSKRKGRGIGSGKGKTSGRGHKGQRSRSGGKVRRGFEGGQMPLYRRLPKF-----GHNKSKKSFFK---KEIKLSEFMKIKDSFIDLIVLKKNKIIN----SKIKIVKIIFSKNFNKKINIKNLKVSKNAKKEIEFFGGTI 143          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_SILST (50S ribosomal protein L15 OS=Silicibacter sp. (strain TM1040) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 57/158 (36.08%), Postives = 79/158 (50.00%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEA---AGFLEGDEVSLETLKKKGLINPSGRERKLP-LKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 705
            +LN L   PG+            +G+G   G G++GQKSRSG  +  G+EGGQMPLY+R+PK     G       KY  VNL  I+    AG L+   ++ ++L   GL+      RKL  +++L  GE + K        S SA E +  AG  LTV
Sbjct:    2 KLNELRDNPGASPKRTRVGRGPGSGKGKMGGRGIKGQKSRSGVAIN-GYEGGQMPLYQRLPK----RGFNKPNAKKYAVVNLGLIQKFIDAGKLDAASITEDSLVASGLV-----RRKLDGIRVLAKGEFTAKATIAVTGASKSAVEAVSKAGGALTV 149          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_RICBR (50S ribosomal protein L15 OS=Rickettsia bellii (strain RML369-C) GN=rplO PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 56/153 (36.60%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLE----GDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +LN L    G+          I +G+G + G G++GQKSR+G  + KGFEGGQ P+ +R+PK     G       KY  +N+ +IEAA   E     D ++ E L + GLIN S ++    L I  D + +  L+FK  ++S+ AKE +E AG
Sbjct:    2 KLNELYNNIGAKKNKKRVARGIGSGKGKTAGRGVKGQKSRAGVAI-KGFEGGQTPMIKRLPK----RGFNCISSKKYNVINIYNIEAAIAEERLNANDVITKEKLIEIGLINKSNKKLVKLLSICSD-DFNYPLSFKLDSYSSKAKEIVEKAG 148          
The following BLAST results are available for this feature:
BLAST of CX671453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_PSEE42.495e-1433.5650S ribosomal protein L15 OS=Pseudomonas entomophi... [more]
RL15_METNO2.495e-1437.5850S ribosomal protein L15 OS=Methylobacterium nodu... [more]
RL15_SINMW3.259e-1434.5950S ribosomal protein L15 OS=Sinorhizobium medicae... [more]
RL15_SACD23.259e-1435.3350S ribosomal protein L15 OS=Saccharophagus degrad... [more]
RL15_PHYAS3.259e-1434.5750S ribosomal protein L15 OS=Phytoplasma australie... [more]
RL15_NITHX3.259e-1434.3850S ribosomal protein L15 OS=Nitrobacter hamburgen... [more]
RL15_MANSM3.259e-1435.8150S ribosomal protein L15 OS=Mannheimia succinicip... [more]
RL15_WIGBR4.257e-1434.6450S ribosomal protein L15 OS=Wigglesworthia glossi... [more]
RL15_SILST4.257e-1436.0850S ribosomal protein L15 OS=Silicibacter sp. (str... [more]
RL15_RICBR4.257e-1436.6050S ribosomal protein L15 OS=Rickettsia bellii (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B06-D11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671453 ID=CX671453; Name=CX671453; organism=Citrus sinensis; type=EST; length=763bp
ATCATCGTAATCATCTCCATCATGGCATCTCTTCTCTCAGTCACTGCAAA
TTCACTAAGCTTTCCATCAACTCCATTCAAGGGCAATGTCAAAACCCTAA
TGCCAAAACCCCCATCAAGCCTTTGCGTCCCTCTCAAAGTCCAACAAAGA
AATAAACCACCCCAGCTCACTGTCTTAAACCAAGCTGCTTCGGCTTCTGC
TTCAGCAACTGTTGGTTCGGGTCCCGTTACGAATGTACGGTTCCGGTTAA
ATAACCTGGGCCCACAACCGGGTTCGAGAAAGAGAGGGAAGAGAAAGGGG
AGAGGAATAGCAGCTGGGCAAGGTAACAGCTGTGGGTTTGGAATGAGAGG
TCAGAAATCGAGGTCTGGTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTC
AAATGCCTCTTTATCGTCGAATTCCTAAGCTCCGTGGGATTGCCGGAGGT
ATGCATGCTGGGTTACCTAAGTATGTCCCTGTTAACTTGAAAGACATAGA
AGCAGCTGGTTTTCTAGAGGGGGATGAAGTCTCACTAGAGACTTTGAAGA
AGAAGGGCTTGATCAATCCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAG
ATTCTTGGTGATGGAGAATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGC
CTTCTCTACATCAGCAAAGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCA
CTGTCTTACCTGGCCGAAAGAAGTGGGTGAAACCATCAGTAGCTAAGAAC
CTTGCACGAGCTG
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