CX671453

Overview
NameCX671453
Unique NameCX671453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12464 contig Csv1_Contig12464:40..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRSV (50S ribosomal protein L15 OS=Streptococcus sanguinis (strain SK36) GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.614e-21
Identity = 63/155 (40.65%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G ++    +Y  VNL  + A  F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:    2 KLHELQPAAGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFLNINRKEYAIVNLDQLNA--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRA5 (50S ribosomal protein L15 OS=Streptococcus agalactiae serotype V GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.614e-21
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G++    R  K  +KILG+GEL+KKL+ KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPK----RGFSNINAKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRA3 (50S ribosomal protein L15 OS=Streptococcus agalactiae serotype III GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.614e-21
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G++    R  K  +KILG+GEL+KKL+ KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPK----RGFSNINAKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRA1 (50S ribosomal protein L15 OS=Streptococcus agalactiae serotype Ia GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.614e-21
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G++    R  K  +KILG+GEL+KKL+ KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPK----RGFSNINAKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_LYSSC (50S ribosomal protein L15 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.614e-21
Identity = 64/155 (41.29%), Postives = 86/155 (55.48%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS          I +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + GL++      K  +K+LG+G L+KKL  KA  FS SAKE +E AG T  V+
Sbjct:    2 KLHELKPAEGSRKQRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQNPLFRRLPK----RGFTNINRKEYAIVNLDALNR--FEDGAEVTTALLLETGLVS----NEKAGIKVLGNGTLNKKLTVKAHKFSASAKEAIENAGGTTEVI 146          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRTD (50S ribosomal protein L15 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.753e-21
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG G+R GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G+I    R  K  +K+LG+GEL+KKL  KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGVGLRPGFEGGQTPLFRRLPK----RGFTNINAKEYTLVNLDQLNV--FEDGTEVTPVVLKEAGII----RAEKSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_BACHD (50S ribosomal protein L15 OS=Bacillus halodurans GN=rplO PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.753e-21
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          I +G G + G G +GQ +RSG GVR GFEGGQ PLYRR+PK     G  +    ++  VNL+ +    F +G EVS E L + G+++      K  +KILG+G+L KKL  KA  FS SA E +EAAG
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQNPLYRRLPK----RGFTNPTRKEFAVVNLEKLNR--FEDGTEVSPELLLETGVVS----NAKDGIKILGNGKLEKKLTVKANKFSASAVEAIEAAG 140          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_LISMO (50S ribosomal protein L15 OS=Listeria monocytogenes GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 63/149 (42.28%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS            +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_LISMH (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 63/149 (42.28%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS            +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_LISMF (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.595e-21
Identity = 63/149 (42.28%), Postives = 84/149 (56.38%), Query Frame = 1
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS            +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
The following BLAST results are available for this feature:
BLAST of CX671453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_STRSV1.614e-2140.6550S ribosomal protein L15 OS=Streptococcus sanguin... [more]
RL15_STRA51.614e-2140.6550S ribosomal protein L15 OS=Streptococcus agalact... [more]
RL15_STRA31.614e-2140.6550S ribosomal protein L15 OS=Streptococcus agalact... [more]
RL15_STRA11.614e-2140.6550S ribosomal protein L15 OS=Streptococcus agalact... [more]
RL15_LYSSC1.614e-2141.2950S ribosomal protein L15 OS=Lysinibacillus sphaer... [more]
RL15_STRTD2.753e-2140.0050S ribosomal protein L15 OS=Streptococcus thermop... [more]
RL15_BACHD2.753e-2142.9550S ribosomal protein L15 OS=Bacillus halodurans G... [more]
RL15_LISMO3.595e-2142.2850S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_LISMH3.595e-2142.2850S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_LISMF3.595e-2142.2850S ribosomal protein L15 OS=Listeria monocytogene... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B06-D11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671453 ID=CX671453; Name=CX671453; organism=Citrus sinensis; type=EST; length=763bp
ATCATCGTAATCATCTCCATCATGGCATCTCTTCTCTCAGTCACTGCAAA
TTCACTAAGCTTTCCATCAACTCCATTCAAGGGCAATGTCAAAACCCTAA
TGCCAAAACCCCCATCAAGCCTTTGCGTCCCTCTCAAAGTCCAACAAAGA
AATAAACCACCCCAGCTCACTGTCTTAAACCAAGCTGCTTCGGCTTCTGC
TTCAGCAACTGTTGGTTCGGGTCCCGTTACGAATGTACGGTTCCGGTTAA
ATAACCTGGGCCCACAACCGGGTTCGAGAAAGAGAGGGAAGAGAAAGGGG
AGAGGAATAGCAGCTGGGCAAGGTAACAGCTGTGGGTTTGGAATGAGAGG
TCAGAAATCGAGGTCTGGTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTC
AAATGCCTCTTTATCGTCGAATTCCTAAGCTCCGTGGGATTGCCGGAGGT
ATGCATGCTGGGTTACCTAAGTATGTCCCTGTTAACTTGAAAGACATAGA
AGCAGCTGGTTTTCTAGAGGGGGATGAAGTCTCACTAGAGACTTTGAAGA
AGAAGGGCTTGATCAATCCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAG
ATTCTTGGTGATGGAGAATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGC
CTTCTCTACATCAGCAAAGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCA
CTGTCTTACCTGGCCGAAAGAAGTGGGTGAAACCATCAGTAGCTAAGAAC
CTTGCACGAGCTG
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