CX671453

Overview
NameCX671453
Unique NameCX671453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12464 contig Csv1_Contig12464:40..802. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAAE (50S ribosomal protein L15 OS=Staphylococcus aureus (strain Newman) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAAC (50S ribosomal protein L15 OS=Staphylococcus aureus (strain COL) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAAB (50S ribosomal protein L15 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAA9 (50S ribosomal protein L15 OS=Staphylococcus aureus (strain JH9) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAA8 (50S ribosomal protein L15 OS=Staphylococcus aureus (strain NCTC 8325) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAA3 (50S ribosomal protein L15 OS=Staphylococcus aureus (strain USA300) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAA2 (50S ribosomal protein L15 OS=Staphylococcus aureus (strain JH1) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STAA1 (50S ribosomal protein L15 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.695e-21
Identity = 61/149 (40.94%), Postives = 83/149 (55.70%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 690
            +L+ L P  GS          +A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRZT (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=rplO PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
[Close]
BLAST of CX671453 vs. ExPASy Swiss-Prot
Match: RL15_STRZP (50S ribosomal protein L15 OS=Streptococcus pneumoniae (strain P1031) GN=rplO PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.009e-21
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1 
Query:  244 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 708
            +L+ L P  GS           ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINAKEYAIVNLDQLNV--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146
The following BLAST results are available for this feature:
BLAST of CX671453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_STAAE4.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAC4.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAB4.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAA94.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAA84.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAA34.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAA24.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAA14.695e-2140.9450S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STRZT8.009e-2140.0050S ribosomal protein L15 OS=Streptococcus pneumon... [more]
RL15_STRZP8.009e-2140.0050S ribosomal protein L15 OS=Streptococcus pneumon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B06-D11-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671453 ID=CX671453; Name=CX671453; organism=Citrus sinensis; type=EST; length=763bp
ATCATCGTAATCATCTCCATCATGGCATCTCTTCTCTCAGTCACTGCAAA
TTCACTAAGCTTTCCATCAACTCCATTCAAGGGCAATGTCAAAACCCTAA
TGCCAAAACCCCCATCAAGCCTTTGCGTCCCTCTCAAAGTCCAACAAAGA
AATAAACCACCCCAGCTCACTGTCTTAAACCAAGCTGCTTCGGCTTCTGC
TTCAGCAACTGTTGGTTCGGGTCCCGTTACGAATGTACGGTTCCGGTTAA
ATAACCTGGGCCCACAACCGGGTTCGAGAAAGAGAGGGAAGAGAAAGGGG
AGAGGAATAGCAGCTGGGCAAGGTAACAGCTGTGGGTTTGGAATGAGAGG
TCAGAAATCGAGGTCTGGTCCTGGCGTTAGAAAGGGTTTTGAAGGTGGTC
AAATGCCTCTTTATCGTCGAATTCCTAAGCTCCGTGGGATTGCCGGAGGT
ATGCATGCTGGGTTACCTAAGTATGTCCCTGTTAACTTGAAAGACATAGA
AGCAGCTGGTTTTCTAGAGGGGGATGAAGTCTCACTAGAGACTTTGAAGA
AGAAGGGCTTGATCAATCCCTCAGGAAGAGAAAGGAAACTGCCTTTAAAG
ATTCTTGGTGATGGAGAATTAAGCAAGAAGCTGAACTTCAAGGCTCGTGC
CTTCTCTACATCAGCAAAGGAGAAGCTTGAAGCTGCAGGCTGTACCCTCA
CTGTCTTACCTGGCCGAAAGAAGTGGGTGAAACCATCAGTAGCTAAGAAC
CTTGCACGAGCTG
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